Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g00307 | ATGGACTCCATGCCTAGATTTCTCATTCCCTTTCTTCTTCTTCTTCTTCTTCTTTCTTGTGTCTTCATCAATGCCAAGAAGACATACATTGTTCATATGAAACATCATGCTCTCCCATCAGAGTATCTCACTCACCATGATTGGTACTCTGCTAGTCTTCAATCTCTTTCTTCATCTTCTTCCTCGGACTCTCTTCTTTACACCTACACTTCCTCCTTCCATGGCTTTGCTGCTTTTCTAGATTCTGAGGAAGTGGAATTGCTCCGCCAATCCGATTCGGTTCTGGGTGTTTATGAAGATACTGTTTACAATCTTCACACCACTCGTACTCCGGGATTCCTTGGTCTCGACTCTGATTTCGGGTTATGGGAAGGTCATACCACTCAGGATCTTAACCAAGCTTCTCACGATGTCATCATTGGTGTTCTCGATACTGGGATTTGGCCGGAATCGAAGAGCTTTGATGACACTGGAATGCCGGAGATCCCATCACGGTGGCGTGGAGGATGTGAAGCAGGACCTGATTTTAGTCCTTCCCTTTGTAACAAGAAACTAATTGGAGCTCGTAGCTTCTCTAAAGGTTATCAAATGGCTTCCGGTGGTGGGTATTTCAGAAAACCGAGAGAGAATCAGTCAGCTAGAGATCAGGATGGGCACGGAACGCACACCGCGAGCACGGCTGCTGGTTCACATGTGCCTAACGCGAGTTTACTTGGTTATGCTAGAGGCATTGCTAGAGGGATGGCTCCACAAGCGAGAGTTGCTGCTTATAAGACTTGTTGGCCAACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCAATATCGGACGGTGTCGACGTACTTTCACTCTCTTTAGGTGGTGGCTCTGCTCCGTATTACAGAGATACCATAGCAATTGGAGCATTTGCAGCTATGGAGAAGGGGGTTTTTGTTTCTTGCTCAGCTGGGAATAGTGGTCCAAACAAGGCTTCTCTGGCCAATGTAGCACCGTGGATCATGACGGTCGGAGCCGGAACGCTCGATCGAGACTTCCCAGCTTATGTCCAGCTTGGAAATGGGAAACGGTTCACTGGAGTGTCGCTATACAGTGGGCAAGGAATGGGGAATAAGGCAGTGGCTTTGGTGTATAACAAAGGAAGTAACACCTCCAGTAATATGTGCTTGCCCGGTTCTCTTGACCCGGCGGTGGTTCGAGGGAAAGTGGTGGTTTGCGACAGAGGAATCAATGCCAGAGTAGAAAAGGGAGGAGTGGTGAGAGATGCTGGTGGGATTGGGATGATTCTGGCAAACACAGCAGCTAGTGGGGAGGAATTGGTGGCTGACAGTCACTTGCTGCCAGCCGTGGCGGTGGGGAGGAAAACCGGCGACTTGATCCGGCAGTATGTTCGATCAGATTCAAATCCAACCGCAGTGTTGAGCTTTGGTGGGACAATTCTGAACGTCCGCCCATCTCCGGTGGTGGCAGCCTTTAGTTCTAGAGGACCAAACTTGGTAACCCCCCAAATCCTAAAGCCGGACGTTATTGGTCCTGGCGTTAACATCCTGGCTGCCTGGTCTGAGTCCATTGGACCTACTGGATTGGAGAACGACAAGAGGAAAACTCAGTTCAATATCATGTCTGGAACTTCAATGTCTTGCCCACATATCAGTGGTCTGGCCGCATTGCTGAAGGCAGCTCATCCACAATGGAGTCCAAGTGCAATCAAATCTGCTTTAATGACTACTGCATACACACAGGACAACACCAACTCGTCTCTCCGGGATGCTGCCGGAGGGGGGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCTCTCTCTCCTGGACTTTTATATGATATCTCAACTAATGACTACATTGCCTTCTTGTGCTCCTTGGACTATGGGATCGATCATGTTCAAGCGATTGTGAAACGTTCAAACATAACCTGCTCAAGAAAGTTTGCTGATCCAGGACAACTTAACTATCCTTCATTTTCAGTTGTGTTCGGGAGCAAGAGGGTTGTTCGGTACACTCGTATAGTCACCAATGTTGGGGCTGCAGGGTCAGTTTACGATGTGGCTACTACTGCACCGTCGGTTGTGAAGGTGACCGTGAAACCTTCAAAGCTTGTGTTCACTAAAGTTGGGGAGAGGAAGAGGTACACTGTTACATTTGTTGCGAGCAGGGATGCTGCTCAAACCACGAGATTTGGGTTTGGATCGATTGTGTGGAGCAATGACCAACACCAAGTTAGAAGCCCTGTGTCATTCGCCTGGACTAGGTTGTGA | 2298 | 48.69 | MDSMPRFLIPFLLLLLLLSCVFINAKKTYIVHMKHHALPSEYLTHHDWYSASLQSLSSSSSSDSLLYTYTSSFHGFAAFLDSEEVELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHTTQDLNQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGGCEAGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENQSARDQDGHGTHTASTAAGSHVPNASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKAVALVYNKGSNTSSNMCLPGSLDPAVVRGKVVVCDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRSDSNPTAVLSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLENDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGGFSNPWAHGAGHVDPHKALSPGLLYDISTNDYIAFLCSLDYGIDHVQAIVKRSNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYDVATTAPSVVKVTVKPSKLVFTKVGERKRYTVTFVASRDAAQTTRFGFGSIVWSNDQHQVRSPVSFAWTRL | 765 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2555800 | 2559249 | + | MELO3C015526.2.1 | Cme02g00307 | 320196 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g00307 | 765 | Gene3D | Peptidase S8/S53 domain | 137 | 628 | IPR036852 | GO:0004252|GO:0006508 | |
Cme02g00307 | 765 | SUPERFAMILY | Subtilisin-like | 105 | 619 | IPR036852 | GO:0004252|GO:0006508 | |
Cme02g00307 | 765 | MobiDBLite | consensus disorder prediction | 200 | 230 | - | - | |
Cme02g00307 | 765 | CDD | Peptidases_S8_3 | 103 | 581 | IPR034197 | - | |
Cme02g00307 | 765 | Pfam | Subtilase family | 136 | 586 | IPR000209 | GO:0006508|GO:0008236 | |
Cme02g00307 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 135 | 154 | IPR015500 | - | |
Cme02g00307 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 215 | 228 | IPR015500 | - | |
Cme02g00307 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 544 | 560 | IPR015500 | - | |
Cme02g00307 | 765 | Gene3D | - | 345 | 483 | - | - | |
Cme02g00307 | 765 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | - | - | |
Cme02g00307 | 765 | Pfam | Peptidase inhibitor I9 | 28 | 106 | IPR010259 | - | |
Cme02g00307 | 765 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 23 | 106 | IPR037045 | - | |
Cme02g00307 | 765 | Pfam | PA domain | 378 | 461 | IPR003137 | - | |
Cme02g00307 | 765 | Gene3D | - | 632 | 762 | - | - | |
Cme02g00307 | 765 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 119 | 615 | - | - | |
Cme02g00307 | 765 | Pfam | Fibronectin type-III domain | 662 | 758 | IPR041469 | - | |
Cme02g00307 | 765 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 18 | 762 | IPR045051 | - | |
Cme02g00307 | 765 | SUPERFAMILY | Protease propeptides/inhibitors | 26 | 105 | - | - | |
Cme02g00307 | 765 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 545 | 555 | IPR023828 | - | |
Cme02g00307 | 765 | CDD | PA_subtilisin_like | 351 | 474 | - | - | |
Cme02g00307 | 765 | PANTHER | CUCUMISIN-RELATED | 18 | 762 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00307 | Cme-Chr2:2555800 | Cme08g00624 | Cme-Chr8:4015273 | 0 | dispersed | |
Cme04g00944 | Cme-Chr4:12697460 | Cme02g00307 | Cme-Chr2:2555800 | 0 | transposed | |
Cme01g02803 | Cme-Chr1:35044878 | Cme02g00307 | Cme-Chr2:2555800 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g00307 | - | - | csv:101209781 | 1450.26 |