Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00307 ATGGACTCCATGCCTAGATTTCTCATTCCCTTTCTTCTTCTTCTTCTTCTTCTTTCTTGTGTCTTCATCAATGCCAAGAAGACATACATTGTTCATATGAAACATCATGCTCTCCCATCAGAGTATCTCACTCACCATGATTGGTACTCTGCTAGTCTTCAATCTCTTTCTTCATCTTCTTCCTCGGACTCTCTTCTTTACACCTACACTTCCTCCTTCCATGGCTTTGCTGCTTTTCTAGATTCTGAGGAAGTGGAATTGCTCCGCCAATCCGATTCGGTTCTGGGTGTTTATGAAGATACTGTTTACAATCTTCACACCACTCGTACTCCGGGATTCCTTGGTCTCGACTCTGATTTCGGGTTATGGGAAGGTCATACCACTCAGGATCTTAACCAAGCTTCTCACGATGTCATCATTGGTGTTCTCGATACTGGGATTTGGCCGGAATCGAAGAGCTTTGATGACACTGGAATGCCGGAGATCCCATCACGGTGGCGTGGAGGATGTGAAGCAGGACCTGATTTTAGTCCTTCCCTTTGTAACAAGAAACTAATTGGAGCTCGTAGCTTCTCTAAAGGTTATCAAATGGCTTCCGGTGGTGGGTATTTCAGAAAACCGAGAGAGAATCAGTCAGCTAGAGATCAGGATGGGCACGGAACGCACACCGCGAGCACGGCTGCTGGTTCACATGTGCCTAACGCGAGTTTACTTGGTTATGCTAGAGGCATTGCTAGAGGGATGGCTCCACAAGCGAGAGTTGCTGCTTATAAGACTTGTTGGCCAACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCAATATCGGACGGTGTCGACGTACTTTCACTCTCTTTAGGTGGTGGCTCTGCTCCGTATTACAGAGATACCATAGCAATTGGAGCATTTGCAGCTATGGAGAAGGGGGTTTTTGTTTCTTGCTCAGCTGGGAATAGTGGTCCAAACAAGGCTTCTCTGGCCAATGTAGCACCGTGGATCATGACGGTCGGAGCCGGAACGCTCGATCGAGACTTCCCAGCTTATGTCCAGCTTGGAAATGGGAAACGGTTCACTGGAGTGTCGCTATACAGTGGGCAAGGAATGGGGAATAAGGCAGTGGCTTTGGTGTATAACAAAGGAAGTAACACCTCCAGTAATATGTGCTTGCCCGGTTCTCTTGACCCGGCGGTGGTTCGAGGGAAAGTGGTGGTTTGCGACAGAGGAATCAATGCCAGAGTAGAAAAGGGAGGAGTGGTGAGAGATGCTGGTGGGATTGGGATGATTCTGGCAAACACAGCAGCTAGTGGGGAGGAATTGGTGGCTGACAGTCACTTGCTGCCAGCCGTGGCGGTGGGGAGGAAAACCGGCGACTTGATCCGGCAGTATGTTCGATCAGATTCAAATCCAACCGCAGTGTTGAGCTTTGGTGGGACAATTCTGAACGTCCGCCCATCTCCGGTGGTGGCAGCCTTTAGTTCTAGAGGACCAAACTTGGTAACCCCCCAAATCCTAAAGCCGGACGTTATTGGTCCTGGCGTTAACATCCTGGCTGCCTGGTCTGAGTCCATTGGACCTACTGGATTGGAGAACGACAAGAGGAAAACTCAGTTCAATATCATGTCTGGAACTTCAATGTCTTGCCCACATATCAGTGGTCTGGCCGCATTGCTGAAGGCAGCTCATCCACAATGGAGTCCAAGTGCAATCAAATCTGCTTTAATGACTACTGCATACACACAGGACAACACCAACTCGTCTCTCCGGGATGCTGCCGGAGGGGGGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCTCTCTCTCCTGGACTTTTATATGATATCTCAACTAATGACTACATTGCCTTCTTGTGCTCCTTGGACTATGGGATCGATCATGTTCAAGCGATTGTGAAACGTTCAAACATAACCTGCTCAAGAAAGTTTGCTGATCCAGGACAACTTAACTATCCTTCATTTTCAGTTGTGTTCGGGAGCAAGAGGGTTGTTCGGTACACTCGTATAGTCACCAATGTTGGGGCTGCAGGGTCAGTTTACGATGTGGCTACTACTGCACCGTCGGTTGTGAAGGTGACCGTGAAACCTTCAAAGCTTGTGTTCACTAAAGTTGGGGAGAGGAAGAGGTACACTGTTACATTTGTTGCGAGCAGGGATGCTGCTCAAACCACGAGATTTGGGTTTGGATCGATTGTGTGGAGCAATGACCAACACCAAGTTAGAAGCCCTGTGTCATTCGCCTGGACTAGGTTGTGA 2298 48.69 MDSMPRFLIPFLLLLLLLSCVFINAKKTYIVHMKHHALPSEYLTHHDWYSASLQSLSSSSSSDSLLYTYTSSFHGFAAFLDSEEVELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHTTQDLNQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGGCEAGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENQSARDQDGHGTHTASTAAGSHVPNASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKAVALVYNKGSNTSSNMCLPGSLDPAVVRGKVVVCDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRSDSNPTAVLSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLENDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGGFSNPWAHGAGHVDPHKALSPGLLYDISTNDYIAFLCSLDYGIDHVQAIVKRSNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYDVATTAPSVVKVTVKPSKLVFTKVGERKRYTVTFVASRDAAQTTRFGFGSIVWSNDQHQVRSPVSFAWTRL 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2555800 2559249 + MELO3C015526.2.1 Cme02g00307 320196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00307 765 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252|GO:0006508
Cme02g00307 765 SUPERFAMILY Subtilisin-like 105 619 IPR036852 GO:0004252|GO:0006508
Cme02g00307 765 MobiDBLite consensus disorder prediction 200 230 - -
Cme02g00307 765 CDD Peptidases_S8_3 103 581 IPR034197 -
Cme02g00307 765 Pfam Subtilase family 136 586 IPR000209 GO:0006508|GO:0008236
Cme02g00307 765 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cme02g00307 765 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cme02g00307 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Cme02g00307 765 Gene3D - 345 483 - -
Cme02g00307 765 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Cme02g00307 765 Pfam Peptidase inhibitor I9 28 106 IPR010259 -
Cme02g00307 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 106 IPR037045 -
Cme02g00307 765 Pfam PA domain 378 461 IPR003137 -
Cme02g00307 765 Gene3D - 632 762 - -
Cme02g00307 765 ProSiteProfiles Serine proteases, subtilase domain profile. 119 615 - -
Cme02g00307 765 Pfam Fibronectin type-III domain 662 758 IPR041469 -
Cme02g00307 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 762 IPR045051 -
Cme02g00307 765 SUPERFAMILY Protease propeptides/inhibitors 26 105 - -
Cme02g00307 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Cme02g00307 765 CDD PA_subtilisin_like 351 474 - -
Cme02g00307 765 PANTHER CUCUMISIN-RELATED 18 762 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00307 Cme-Chr2:2555800 Cme08g00624 Cme-Chr8:4015273 0 dispersed
Cme04g00944 Cme-Chr4:12697460 Cme02g00307 Cme-Chr2:2555800 0 transposed
Cme01g02803 Cme-Chr1:35044878 Cme02g00307 Cme-Chr2:2555800 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00307 - - csv:101209781 1450.26