Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00318 ATGGCTCTCTCCATTTCTTCCACTGCGCTCTCCTCCTTCCCAATCAGAGAATCCTCTCACAGAGCAAATTTTCCGGGAAACTTCCCAAATCATAAGCTCCGGCGAGATTACTCCGATTTAAAAGCGGCGAAATCCGGCGTGTCTAGCGTCTGTGAACCGCTCCCTCCCGATAGACCCCTCTGGTTTCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTTGATCCGCTTGGATTGGGTTCGGACCCAGAGACACTAAAATGGTTCGCTCAAGCGGAACTAATGCACGCAAGATGGGCAATGCTAGCCGTAGCCGGAATCCTTCTACCGGAATGGTTCGAGAGCTTAGGACTCATACAAAATTTCTCATGGTACGACGCCGGATCTCGAGAATATTTTGCAGATCCGACGACATTGCTGGTGGCGCAATTGGCGTTGATGGGGTGGGTGGAGGGGAGGCGATGGGCCGACTTGGTCAACCCGGGAAGTGTGGACGTTGACTTGAAGCTGCCCCACAAAAAGAAAGTAAAGGCAGATGTGGGCTACCCGGGGGGGTTCTGGTTTGACCCTATGATGTGGGGGAGGGGGTCGCCGGAGCCGGTGATGGTGCTCAGGACTAAAGAGATTAAGAATGGGAGGTTGGCTATGTTGGCCTTCGTTGGACTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCCCTTGAGAATCTTGCTGCACACGTCGCAGATCCCGGCCATTGCAATATCTTTTCGGCATTTACTTCTGGTTCGGGTTGA 798 54.14 MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFTSGSG 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2605614 2608496 - MELO3C015536.2.1 Cme02g00318 320207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00318 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 260 IPR001344 GO:0009765|GO:0016020
Cme02g00318 265 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Cme02g00318 265 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 260 - -
Cme02g00318 265 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Cme02g00318 265 SUPERFAMILY Chlorophyll a-b binding protein 57 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00318 Cme-Chr2:2605614 Cme10g00664 Cme-Chr10:4242300 4.68E-66 dispersed
Cme02g00318 Cme-Chr2:2605614 Cme02g01877 Cme-Chr2:25348203 1.59E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00318 K08908 - csv:101211430 546.584