Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00518 ATGGAGAATATTATGATGGTTGATGATGCTTTGGGAGACTGTTCGGATATGGAAGTTGATGATATAAGGTGTGACAATATTGCAGAGAAAGATGTTAGTGATGAAGAAATCGATGCAGAGGATTTGGAGAGGCGTATGTGGAAGGATAGGATCAAGCTTAAAAGGATTAAGGAAAGAGAAAAGATTGCTGCACAACAAGCTGCGGAGAAGCAGAAACCAAAGCAGACGTCTGACCAGGCTCGAAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTTAAATATATGTTGAAACTGATGGAAGTATGCAAAGCTCGGGGATTTGTATATGGCATTATACCTGAAAAGGGAAAACCAGTTAGTGGTGCTTCTGATAACATTCGAGCTTGGTGGAAGGAAAAAGTTAAATTTGACAAGAATGGACCGGCTGCTATAGCCAAGTATGAAGCAGAATGTCTTGCCAAAGGAGAGGCAGATGGAAATGGAAATGGTAATTCCCAGAGCGTTCTTCAAGACCTTCAGGATGCAACACTTGGGTCTCTTTTGTCTTCTTTGATGCAACATTGTGATCCCCCTCAGCGGAAGTATCCTTTAGAAAAAGGGGTTCCTCCACCCTGGTGGCCCTCTGGGAATGAAGATTGGTGGGTAAAACTTGGGCTATCCCCGGGCAATAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTAGGTGTCTTAACAGCTGTAATAAAGCATATGTCACCCGACATTGCAAAGATAAGGAGACATGTACGGCAGTCAAAGTGCTTACAAGACAAAATGACAGCAAAAGAGAGTGCAATTTGGTTGGGAGTTTTAAGCCGAGAGGAATCTCTAATCCGACAACCAAGTAGTGATAATGGAGCTTCTGGAATAACGGAGACACCAGTAGGTGGTCGTGGAGAAAAACAAGCTGCAGCAAGTAGTGAAAGTGACTATGATGTTGATCTTGCTGATGATGGTGTCGGGTCAGTTTCTTCTAAAGAGGATAAGAGGACTCGATCGGTGGAGGTGGAGCCATCCAGTAATCTACGCAATAATTCTCAACCTGCTGAAGAAAAGGAGCAAGGTGAAAAACAGAGAAAAAGGCATCGTGGTGGCAGGATAAAGCCTGCCAACCGAACACTGGCTCCCTCTCAGAACGCAGAAGAACCAAGTGTCGAACCAAGAAATACTCAGCTCGATATTAACCATTCTAATGTACCGCTAGATAGATTTGAAATTCCAGGAAACCAACAACAACAGGATATTGCCACAGCTTTGAGGCCACTGGAGAAAGACTTGGATATCCAGTCAGAAGTACCGGCTCCCCAGTTGTTCAACATGTTCTCTGCACCATCGTCCGATAATATCAATATAATTTCCACTCAGAGCATGTTTGTTGATGGAAGGCCTTTGTTGTATCCTGTTATGCAGAATTCTGAGATGCGACACGAAAATGCTTACAATATTTATAACCCGTCTGTGGAGTATAGATCCAATTTTGATGTGCAGCATTCTCAATTTGTAAATGAGCCACAAATGAGATTGGAGGAAGGAGGAGTACATATTCCAACACAACATAGAAACAATGAGACGATAGGAGGAGAATTCAACTATGTAAAAGAAACGTTCAATGCCGAACAAGATAGGCCTGTTGATCCACAATTTGGATCACCAATCAACAGTCTATCATTAGATTATGGGGCATTTAACAGTCCGTTCCATCTTGGAATCGATGGTGCAAGCTCATTCGATGACTTTTTGGTTGACGATGATTTGATCCAATACTTCGGAGCATAA 1812 42.66 MENIMMVDDALGDCSDMEVDDIRCDNIAEKDVSDEEIDAEDLERRMWKDRIKLKRIKEREKIAAQQAAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAKGEADGNGNGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLSPGNSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASGITETPVGGRGEKQAAASSESDYDVDLADDGVGSVSSKEDKRTRSVEVEPSSNLRNNSQPAEEKEQGEKQRKRHRGGRIKPANRTLAPSQNAEEPSVEPRNTQLDINHSNVPLDRFEIPGNQQQQDIATALRPLEKDLDIQSEVPAPQLFNMFSAPSSDNINIISTQSMFVDGRPLLYPVMQNSEMRHENAYNIYNPSVEYRSNFDVQHSQFVNEPQMRLEEGGVHIPTQHRNNETIGGEFNYVKETFNAEQDRPVDPQFGSPINSLSLDYGAFNSPFHLGIDGASSFDDFLVDDDLIQYFGA 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5334893 5337591 + MELO3C015210.2.1 Cme02g00518 320407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00518 603 Gene3D - 160 298 IPR023278 GO:0003700|GO:0005634
Cme02g00518 603 Gene3D - 74 152 IPR023278 GO:0003700|GO:0005634
Cme02g00518 603 Coils Coil 39 59 - -
Cme02g00518 603 SUPERFAMILY DNA-binding domain of EIN3-like 168 290 IPR023278 GO:0003700|GO:0005634
Cme02g00518 603 MobiDBLite consensus disorder prediction 333 348 - -
Cme02g00518 603 MobiDBLite consensus disorder prediction 289 404 - -
Cme02g00518 603 MobiDBLite consensus disorder prediction 62 85 - -
Cme02g00518 603 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 602 IPR006957 GO:0005634
Cme02g00518 603 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 1 602 - -
Cme02g00518 603 MobiDBLite consensus disorder prediction 384 404 - -
Cme02g00518 603 Pfam Ethylene insensitive 3 40 287 IPR006957 GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00518 Cme-Chr2:5334893 Cme03g01109 Cme-Chr3:20497648 6.73E-134 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40868 PF04873 EIN3 8.70E-127 No_clan Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00518 K14514 - csv:101210347 1157.9