Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00585 ATGTTTCAAGATGAAGGTACATCCTCCATAACTTCCTCTCCTCTTCAGTTCTTCACAATGATGTCTCTTTCCCCTAAATTGGGTTCCCCATATCCATGGCTTAGAGAGCTTAAATCTGAGGAGAGGGGTTTGTATTTAATCCATTTGTTGCTTACTTGTGCAAATCATGTGGCTGTTGGTAGTCTTGACAGAGCTAATCTTGCCCTTGATCAAATATCCCATCTTGCTTCTCCAGATGGTGATACAATGCAGCGAATTGCGGCGTACTTCGCCGAGGCTCTAGCGGATAGGATCCTCAAGACTTGGCCTGGTCTTTACAAGGCCTTTAACTCTACTAAGATACCAATGGTGTCAGAAGAGATTCTTGTTAAGAAACTGTTCTTTGAAATGTTTCCATTCCTCAAGGTGGTTTTTGTGCTTACTAATCAAGCTATTGTTGAAGCCATGGAGGGGGAAAAGATGATTCATATTATTGATCTCAATGCTAATGAAACTGCTCAATGGCTTGCTCTTTTGCAAGTCTTGAGTGTGAGGCCTGAAGGACCTCCACATTTAAGAATCACTGGAGTTCATCCACAGAAAGAGATTCTGGATCAAATGGCTCGTAGGTTGACCAATGAAGCCGAGAAATTGGATATCCCGTTTCAATTCAATTCCGTTATCAGTCGACTAGAGGATCTTGATATGGAAAAGCTTCGTGTGAAAACCGGGGAGGCTCTGGCTATCAATTCAGTTCTTCAGTTGCACAACCTTTTGGGATATGATAATGAAGCCTTGCAAAAGCCATCTCCATCAGCAGCCAAGAATGTAAATGGAGTTCAATACTCGAGATACCCGCATCTCAACCAAACCACATTGAGCGAGTTACTCGACAAGGATATGGTTAACGGATGCAGTCCAAGTCCCGATTCAGTTTCCTCTTCAGCACTATCTCAGGCTAATGCGACGAAGATTGACAGCTTTTTGAATGGATTGTGGAGTTTGACGCCGAAGGTGATGGTCGTAACAGAACAAGATTCTAACCATAACGGTACAACAGTTATGGAGAGATTATTGGAAGCTCTCCACACATATGCAGCTATCTTTGATTGTTTGGAGTCTAACATGTCAAGAACATCCCTGGAGAGGTTGAAGTTGGAAAAGATGCTATTTGGGGAAGAGATTAAGAACATCATAGCTTGTGAGGGAGCTGAAAGGAAGGAACGGCATGAAAAACATGAGAACTGGAGTCAGCGGTTCGATGTCGCTGGGTTTAGGCAAGTGCCTTTGAGTTATTATGGAATGCTGCAGGCTCGGAGCTTGTTGCAGGGGTATGGTTGTGGTGGTTATAGGATGAAGGAAGAGAATGGCTGTGTGATGATTTGTTGGCAAGATCGTCCATTGTTTTCGGTTTCGGCTTGGAGATGTTGTAAGTAG 1416 43.43 MFQDEGTSSITSSPLQFFTMMSLSPKLGSPYPWLRELKSEERGLYLIHLLLTCANHVAVGSLDRANLALDQISHLASPDGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKIPMVSEEILVKKLFFEMFPFLKVVFVLTNQAIVEAMEGEKMIHIIDLNANETAQWLALLQVLSVRPEGPPHLRITGVHPQKEILDQMARRLTNEAEKLDIPFQFNSVISRLEDLDMEKLRVKTGEALAINSVLQLHNLLGYDNEALQKPSPSAAKNVNGVQYSRYPHLNQTTLSELLDKDMVNGCSPSPDSVSSSALSQANATKIDSFLNGLWSLTPKVMVVTEQDSNHNGTTVMERLLEALHTYAAIFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGAERKERHEKHENWSQRFDVAGFRQVPLSYYGMLQARSLLQGYGCGGYRMKEENGCVMICWQDRPLFSVSAWRCCK 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6484355 6486588 - MELO3C015155.2.1 Cme02g00585 320474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00585 471 Pfam GRAS domain family 46 468 IPR005202 -
Cme02g00585 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
Cme02g00585 471 PANTHER SCARECROW-LIKE PROTEIN 3 2 470 IPR030008 GO:0003700|GO:0005634|GO:0009739
Cme02g00585 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 470 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00585 Cme-Chr2:6484355 Cme10g00052 Cme-Chr10:401939 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40874 PF03514 GRAS 7.40E-141 CL0063 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00585 - - csv:101215435 910.983