Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00603 ATGGAAGCTGCTTTCTCAATATTCATTACTCAATTGCCACACCAAAATTCCCCAATAGCAATATCCAAAGCTTTTATTGTGTTTCTATTTATGGCTTTTGCTTCTGTCATGTTTTCACGTTGTTACAATCGTAGAAAAAAATACTCGGTTCGAAAAGCACTTCTCCCACCAGGCCCAAAGCCATGGCCAATCGTGGGTTGCCTCCCAACAATGTTAACCAACAAATCCCCAACATACCAATGGATTCATTCGGTAATGAAGCAATTCAACACCGAAATTGCTTGCATACGCCTTGGAAATACTTACGTTATCCCAGTCACTTCTCCAGAACTTGCTCTTGAATTTCTTAGGACACATGATTCTGTCTTTTCATCACGTTCTTCTATTTCCAACACTGTTGATATCTTAAGTCGTGGATATCTCACCACCGCATTTTCATCCATGGGAGATCAATGGAAGAAGATGAGAAGAATTCTCGCATCGGAAATACTCAGTCCGACAATGCTTCATCGAATGCTTGAGCAAAGAATTGCAGAAGCTGATACACTTTTACACTATATTTTCTCCATTACAAGTGAAAATGGAGGTGGTGCAGTAATTAATGTTAGAAGCATTACACAACATTATTGTGGTAACATTATTAGAACAATGCTATTCAATAGAAGATACTATGGCAAAGGCAGGGAAGATGGAGGGCCAACTTCGGAAGAAGAAGAACATAATCAAGCATTATTGACAATTCTTAGGCATATTAATGCATTTTCTATATCAGATTTTATGCCTTGTCTGAAGCCATTTGATTTAGATGGACATGAGAAGATTATGAAGAACGCTTTGAATGCTGTTCGAAAGTATGACGAACCCATAATAGATGAAAGAGTGCAACAATGGAAGAAGGATAAGAAAATAGAAGTCAAAGACATTCTTGATATCCTTATTTCACGCAAAGATGATAATGGAAATTCATTATTGTCGATTGACGAGATTAAGGCCCAAATCACTGAGTTACAAATTGCAACGATAGATAATCCATCGAATGCAGTGGAATGGGCAATGGCGGAACTTATCAATCAACCAGAAGTTCTCAAGAAAGTTGTCGACGAGTTGGACAACGTAGTTGGAAAAGAAAGGCTAGTTCAAGAATATGATATCCCAAAACTTAAATATCTCACTGCTTGTCTTAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATGTTCCACATGTCCCAACATTTGATATAGTTGTGAATGGTTACTTAATTCCAAAAGGTAGTGAAGTCTTGCTCAGTCGTTTAGGTCTAGGTCGAAACCCAAGAATTTGGAAGGATCCGATCAAATTTAATCCAGAACGTCACTTAAAAGATAACACAGTAGAATTAGGATTATCAGAACCCAACTTGCGATTCATCACCTTCAGTAGAGGGAGGAGAGGATGTGTTGGAAGCTCACTTGGAACGAACATTACCGTAATGCTATTTGCGAGACTTCTACAAGGATTTTCATGGAGCTTACTACCAGGAATCACACAAATTGACTTCTCTAAAGTGGATCGTGAAGGCTTACTCTTGAATCCATTACAGTTGCATGCAGAGCCACGTCTGTCTCGTAGGATAATTTACATGTTGCGCGGAACTGCATGGGTGAGGGAAGCCCAATGGCGCTGGCCCAACAAGCCTCCAATTTCAAGGGTAAGATCGGGTGGATAG 1713 39.35 MEAAFSIFITQLPHQNSPIAISKAFIVFLFMAFASVMFSRCYNRRKKYSVRKALLPPGPKPWPIVGCLPTMLTNKSPTYQWIHSVMKQFNTEIACIRLGNTYVIPVTSPELALEFLRTHDSVFSSRSSISNTVDILSRGYLTTAFSSMGDQWKKMRRILASEILSPTMLHRMLEQRIAEADTLLHYIFSITSENGGGAVINVRSITQHYCGNIIRTMLFNRRYYGKGREDGGPTSEEEEHNQALLTILRHINAFSISDFMPCLKPFDLDGHEKIMKNALNAVRKYDEPIIDERVQQWKKDKKIEVKDILDILISRKDDNGNSLLSIDEIKAQITELQIATIDNPSNAVEWAMAELINQPEVLKKVVDELDNVVGKERLVQEYDIPKLKYLTACLRESFRLHPFSPFNVPHVPTFDIVVNGYLIPKGSEVLLSRLGLGRNPRIWKDPIKFNPERHLKDNTVELGLSEPNLRFITFSRGRRGCVGSSLGTNITVMLFARLLQGFSWSLLPGITQIDFSKVDREGLLLNPLQLHAEPRLSRRIIYMLRGTAWVREAQWRWPNKPPISRVRSGG 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6786138 6788984 - MELO3C029342.2.1 Cme02g00603 320492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00603 570 Pfam Cytochrome P450 56 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 PANTHER PHENYLALANINE N-MONOOXYGENASE 29 540 - -
Cme02g00603 570 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 29 540 - -
Cme02g00603 570 Gene3D Cytochrome P450 49 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Cme02g00603 570 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00603 570 SUPERFAMILY Cytochrome P450 56 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00595 Cme-Chr2:6631010 Cme02g00603 Cme-Chr2:6786138 0 dispersed
Cme02g00599 Cme-Chr2:6744731 Cme02g00603 Cme-Chr2:6786138 1.71E-07 dispersed
Cme02g00603 Cme-Chr2:6786138 Cme10g01281 Cme-Chr10:13741188 0 dispersed
Cme02g00602 Cme-Chr2:6772122 Cme02g00603 Cme-Chr2:6786138 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00603 - K12153 csv:101217397 969.148