Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00798 ATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACTTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAAACCGTCTTTTGGATCTTCCAGGAAATCAGCTTCTTTTGTAGTTAGAGCTGGAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGGCAACTGTGGTTTGCTTCAAAACAAAGTCTTACTTACTTGGATGGAAGTTTGCCAGGCGATTTTGGGTTCGACCCATTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAAATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCCCCAGAGATCTTTGGATCACTGGGGTTGATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTGGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAATACTTTTTGGGCTTAGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGTGGGCCATTGTTCAACCCACTAGGGTTTGGTAAAGATGAGAAGTCAATGAAGGAATTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAATCTTTTGGATCATTTGTCTGACCCTGTCAACAACAATATTTTGACCAGCCTTAAATTCCACTAG 822 46.84 MATQALVSSSLTSSVGAARQRLGAKPSFGSSRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10216670 10218972 - MELO3C015076.2.1 Cme02g00798 320687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00798 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 272 IPR001344 GO:0009765|GO:0016020
Cme02g00798 273 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 272 - -
Cme02g00798 273 Gene3D Chlorophyll a/b binding protein domain 54 272 - -
Cme02g00798 273 Pfam Chlorophyll A-B binding protein 64 242 IPR022796 -
Cme02g00798 273 SUPERFAMILY Chlorophyll a-b binding protein 52 269 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00798 Cme-Chr2:10216670 Cme06g02076 Cme-Chr6:26050222 4.63E-39 dispersed
Cme02g01877 Cme-Chr2:25348203 Cme02g00798 Cme-Chr2:10216670 2.35E-30 dispersed
Cme10g00664 Cme-Chr10:4242300 Cme02g00798 Cme-Chr2:10216670 9.14E-32 dispersed
Cme12g01983 Cme-Chr12:25597998 Cme02g00798 Cme-Chr2:10216670 2.25E-16 dispersed
Cme02g00798 Cme-Chr2:10216670 Cme08g00160 Cme-Chr8:1124451 7.26E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00798 K08909 - csv:101202993 540.421