Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00846 ATGGGTGTTTCTGGAAAATGGTTCAAAGCATTAGTTGGTTCAAAGAAGTCGGAAAAATCTCAGTCATCAGAACATGACGAAAATGCGAGGACAGTCACCAACAAGTTTTGGCATCGGAGAAAACATTCTGTTGATATTGATGCCAATAAACTTCAGCATGAGTTTAATTCAAACTTTACCCCATTTGTTGAAGAGTCCAATGCTCTTTCAAAGTCAGAAGCTGCTTCTATTCCTTCTGATCCATTTCAAACTTATGATGCATTACATAGTCGACAGATTGATATAGAGGAACAGGCTGCTATACGCATCCAAACAATGTTTCGAGGATTTCTGGCTAGAAGAGCTCTCCGAGCTCTCAAAGGATTGGTTAGACTTCAAGCTCTTGTCAGGGGTCATGCTGTCCGAAAACAAGCTGCTATAACTCTACGGTGTATGCAAGCTTTAGTGAGAGTACAGGCTCGTGTTCGAGCAAGGCGTGTACGTATTGCATTGGAAAGTGAAACTGCACAACAAAAACTTCAACAGCAACTTGAAAACCAGGCTCGAGTTCGAGAAATTGAAGAAGGTTGGTGCGACAGCGTTGGATCTGTTGAAGACATTCAAGCAAAATTATTGAAAAGGCAGGAGGCTGCAGCTAAGCGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCGAGACAGCAGGCTGCCCTCTCTCAGTTTGAACCAGATAAAAGCAGCTGGGGTTGGAACTGGTTGGAAAGATGGATGGCTGTTCGTCCGTGGGAAAACCGCTTTCTTGATATCAATCTGAGAGATGGAGTGATGATTCGTGAGAATGGATCATCTGAGGGCAAAAGTAACACTAAGTCTCATTTAAAAACTACTGGCAAGAAGGCAAACTTAGTAACTGACCAATCAAACCTCTCAAGCCAGAAAACTGCTGCCTCGCATTCTGATGGATGTGGTTCATCATCCTCCACTAAGTCAGCTGGCACTATAGAAATATCCAGTGCACAGGTTCAAAAGCTCAAGCACAAACTGGCACCTGAGAGGCCATTTGAAGACGTCAAACCAAAAGTGGATACTGGTTTAAGATCACATAGCAATCCGAAAGAGAGATCCACACCATTGGTAAAAAATGCAAAGAAGCGATTATCCTTGCCTAATAATGATCCCGGTGGTCAAAACCAAACAGCGAGAAATTCCACTGGCAAAGTGACAATGACGAAGTCAATCAACGATAAACCGAAGTCAATTTCCAGATCAAATGACACAAAATCTGCAAAACCTAAATCACATAATTGA 1302 42.93 MGVSGKWFKALVGSKKSEKSQSSEHDENARTVTNKFWHRRKHSVDIDANKLQHEFNSNFTPFVEESNALSKSEAASIPSDPFQTYDALHSRQIDIEEQAAIRIQTMFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESETAQQKLQQQLENQARVREIEEGWCDSVGSVEDIQAKLLKRQEAAAKRERAMAYALAHQWQAGSRQQAALSQFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMIRENGSSEGKSNTKSHLKTTGKKANLVTDQSNLSSQKTAASHSDGCGSSSSTKSAGTIEISSAQVQKLKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGGQNQTARNSTGKVTMTKSINDKPKSISRSNDTKSAKPKSHN 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11037114 11046371 - MELO3C009991.2.1 Cme02g00846 320735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00846 433 MobiDBLite consensus disorder prediction 279 338 - -
Cme02g00846 433 SMART iq_5 95 117 IPR000048 GO:0005515
Cme02g00846 433 SMART iq_5 118 139 IPR000048 GO:0005515
Cme02g00846 433 MobiDBLite consensus disorder prediction 277 433 - -
Cme02g00846 433 MobiDBLite consensus disorder prediction 416 433 - -
Cme02g00846 433 MobiDBLite consensus disorder prediction 388 415 - -
Cme02g00846 433 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Cme02g00846 433 Gene3D - 96 138 - -
Cme02g00846 433 PANTHER IQ-DOMAIN 5-RELATED 2 402 - -
Cme02g00846 433 MobiDBLite consensus disorder prediction 343 367 - -
Cme02g00846 433 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Cme02g00846 433 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Cme02g00846 433 PANTHER IQ-DOMAIN 5-RELATED 2 402 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02835 Cme-Chr1:35275872 Cme02g00846 Cme-Chr2:11037114 1.09E-37 dispersed
Cme02g00846 Cme-Chr2:11037114 Cme10g00057 Cme-Chr10:431699 5.30E-49 dispersed
Cme06g01146 Cme-Chr6:8843162 Cme02g00846 Cme-Chr2:11037114 2.29E-34 dispersed
Cme11g02434 Cme-Chr11:31128618 Cme02g00846 Cme-Chr2:11037114 3.88E-25 dispersed
Cme02g00846 Cme-Chr2:11037114 Cme07g00215 Cme-Chr7:1429531 1.78E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00846 - - csv:101204117 770.385