Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00990 ATGGCTGCCACTAACACCAATGTCTCCGGCTACGACGAAGATCGGGTCTTGGCCACCGCTCAACAGATCGTTAAGAGCCTCAATACCCCTAAAGAAGTTCGTGAGGATATGCTCTTCATTCTCTCCACTTTTGATAATCGTCTTTCCAGTATTGGTACTATGATCAACAATGACGACTCCAACGTCAAGAACTCTAGGTTAGACGCCGCCGAGAAGGTGATTCTACGTTGGGACCCTAGTTCCGATCAGTCTAGACGGTCGTTTAATTGGGAAGATTCGCCGGAGGAGGCGGCTGAATATTTATCGGCGGTGGATGATATACTTCAGTTACTAGAAGAGCTTTCAATTGGTTCCGAATCAACCGACATCGTAGATCGAGCAGAAAATTTGATCCAAATGGCAATGTGCCAGCTCGAGAGCGAATTTCGCCATATCCTAATTCAGAGCACGATCCCTCTTGACGCCGAGCGGCTTTATGGTTCGATCCGAAGAGTTCATCTCTCATTTGCGTCTCATTACAGTGAAATTGACGACGAATTCGAGAGTTTTGGCGAGGAAACTCGTAGTTCCGGGCGATTTCATGAGCGAGGTGCGACAATTGGAGAAGATTCTTGGGTCGATTTGATCCATCCTGATGCCGCTGTTGATCTTTCGGAGATTGCGGATCGTATGATTCGCTCTGGCTACGAAAAGGAATGTGTTCAAGTCTATAGCACTGTTCGTCGTGATGCTTTAGATGAGTGCTTGATGATTCTTGGCGTCGAACGCCTCAGCATTGAGGAGGTTCAAAAAAGTGATTGGAAATTCTTAGATGAGAAGATGAAGAAATGGATTCAGGCTGTCAAGATTACAGTTCGGTTGATTTTGGAAGGTGAGAAGAGGCTGTATGATCAGATTTTCAATGGCGCCAATGAATCCAAGGAGGTTTGTTTTAATGAAACAGCAAAAGGGTGTGTAATGCAGTTGTTGACTTTTGGTGAGGCAGTGGCTATTGGGAAGAGGTCACCGGAGAAGTTGTTCCGAATCTTGGATATGTACGACGCTTTAGCCGGTGTTTTGCGCGACTTGGAAGCCATGGTTTCTGATGAGTTTTTGATCAGTGAAGCACATGGTGTATTGTGTGGACTGGGTGAAGCAGCCTTAGGGACATTTGTTGAGTTTGAGAATGCCATTGAAAGCGAAAATTCGAAGAAAGCAATGCAAAACGCCGAGATTCACCCACTTGTTCGATATGTAATGAATTACGTTAGATTGTTGGTTGATTACAGTAAGACAATGAACTCTCTTTTAGAAGATGAGGAAGTACAAGGCTCGCCAAACAAGAGGGATAACGTCGATAATCTGCAATTGGAAAGTACGTCGTCGCCTTTAGCTCGTAGATTATTAATGCTATTATCGTCTTTGGAATCAAATCTTATGGAAAAAGCCAAGCTCTATGAGGATGTTGCAATGCAGTTCATATTTCTAATGAACAATATACTGTACATAGTGAAAAAAGTGAAAGATTCTGAGCTTGCCCAACTGCTTGGCGATAACTGGCTTCGCAGGCATAGCGGCCAAATTCGCCAATACGAAACGAGTTACCTTAGGGCTTCTTGGAGCAAAGTTTTGTCATTCTTAAAAGATGAAGGTATTGGTGGCAGCACAAGCAATGCCTCAAAGGTAGCATTGAAGGAAAAGTTCAAGAATTTCAATGCAAGTTTTGAGGAAATATGTAGGGTTCAAACAGCTTGGAAGGTATCAGATGCTCAACTCCGCGATGAGCTGATAATATCCGTTTCGGAGAAGGTGATTCCAGCGTATCGCTCCTTCTTAGGAAGGTTTAAAAATCAATTAGAGAGCGGAAGGCATTCGGGGAAGTACATAAAGTACACGCCAGATGATTTAGAGAACTCTCTATCAGATTTGTTTGAAGGATCACCTGTTGTATCACATCATTTGAGAAGAAAGGGTACTTGA 1959 43.64 MAATNTNVSGYDEDRVLATAQQIVKSLNTPKEVREDMLFILSTFDNRLSSIGTMINNDDSNVKNSRLDAAEKVILRWDPSSDQSRRSFNWEDSPEEAAEYLSAVDDILQLLEELSIGSESTDIVDRAENLIQMAMCQLESEFRHILIQSTIPLDAERLYGSIRRVHLSFASHYSEIDDEFESFGEETRSSGRFHERGATIGEDSWVDLIHPDAAVDLSEIADRMIRSGYEKECVQVYSTVRRDALDECLMILGVERLSIEEVQKSDWKFLDEKMKKWIQAVKITVRLILEGEKRLYDQIFNGANESKEVCFNETAKGCVMQLLTFGEAVAIGKRSPEKLFRILDMYDALAGVLRDLEAMVSDEFLISEAHGVLCGLGEAALGTFVEFENAIESENSKKAMQNAEIHPLVRYVMNYVRLLVDYSKTMNSLLEDEEVQGSPNKRDNVDNLQLESTSSPLARRLLMLLSSLESNLMEKAKLYEDVAMQFIFLMNNILYIVKKVKDSELAQLLGDNWLRRHSGQIRQYETSYLRASWSKVLSFLKDEGIGGSTSNASKVALKEKFKNFNASFEEICRVQTAWKVSDAQLRDELIISVSEKVIPAYRSFLGRFKNQLESGRHSGKYIKYTPDDLENSLSDLFEGSPVVSHHLRRKGT 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14729508 14731698 - MELO3C010152.2.1 Cme02g00990 320879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00990 652 SUPERFAMILY Cullin repeat-like 70 638 IPR016159 -
Cme02g00990 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 52 651 IPR004140 GO:0000145|GO:0006887
Cme02g00990 652 Gene3D Exocyst complex component Exo70 73 646 - -
Cme02g00990 652 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 52 651 - -
Cme02g00990 652 Pfam Exo70 exocyst complex subunit 275 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00990 Cme-Chr2:14729508 Cme12g01592 Cme-Chr12:23218332 0 dispersed
Cme02g00990 Cme-Chr2:14729508 Cme11g01259 Cme-Chr11:19404241 4.26E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00990 K07195 - csv:101205970 1216.83