Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01042 ATGCAGAAAGGTGATCAAACTGTTCTAAGCTTGAGACCTGGTGGCGGTCGTCCTAGACTCCTTGGTCCTCGCTTTGACCTTTCATCTTCATCTTCTTCTTCATCCTCTTCATCTTCTTTTGCTTTCGGTTCTTTTTCCTCTGATCTCCCTACCCTTCGTCCCCATGCCGCTTCTTCCGCTTCTTTTTCTGTAAAGGGTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTTCGATATACCCGAGATCAGCTTTTGCAGCTTCGGGAGGGTGTGGAAGTTCCAGATGATATACTAAAAATTAAACGGGAAATTGATGTGGAAATTTTTGGCGAGGAACAAAGTTGGAGTCGTGGAGAGAGCAATCAACTCAATCAATCTCAGAATCGGTATTCTGAGCCTGATAATCGTGACTGGCGTGGGCGCTCTGCCCAATTCTCTGCGTCCGGAGAGGAGAGGTCCAGGGAAACAAATCGAGACAGAGATTTTGGTGGTCATTTTGACTCTAGACAGCAAGATGCAAACAACTTGAATCGTCAAGATTCTCACTCATCTTGGACCCGAACCACTTCTAACCAAGGGGGAGCACCTCCTGCATTAATCAAAGCTGAGGTACCATGGTCAGCTAGGAGAGGAAATCTCTCTGATAAGGATCGTGTCTTGAAGACTGTAAAGGGGATATTGAACAAGTTAACACCAGAAAAGTTCGATCTCCTCAAGGGTCAGCTAATTGACTCTGGAATCACCTCCGCTGATATTTTGAAGGATGTCATTTCACTCATTTTTGACAAGGCTGTTCTTGAGCCCACATTTTGCCCCATGTATGCTCAATTGTGTTCCGATCTGAATCAGAAGCTACCTCAATTTCCATCTGATGAACCTGGTGGCAGGGAAATTACTTTTAAACGAGTCCTCCTAAATATCTGTCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTAGGCAGATGACTGCCCCTGAGCAAGAGAGTGAGCGCAGAGATAAAGACAGACTTGTGAAACTTCGTACTCTTGGAAATATTCGTTTGATTGGAGAGCTTCTAAAGCAAAAGATGGTGCCTGAGAAGATTGTTCACCACATTGTCCAGGAACTTCTAGGACCAGATAACAAAACCTGTCCTGCCGAAGAAAATGTCGAGGCAATTTGTCAATTCTTTAACACCATAGGTAAGCAGCTAGACGAGAACACTAAATCACGACGTATTAATGACATGTACTTTGGCCGATTGAAAGAACTGACCACACACACTCAGTTGGCCCCACGATTGAAGTTCATGGTCCGTGATGTTCTTGATCTGCGTGCTAACAATTGGGTTCCTAGGCGTGAGGAGGTTAAAGCCAAAACTATAACTGAAATACATTCAGAGGCAGAAAAGAATCTGGGACTACGCCCTGGTGCTACTGTTAATATCAGAAATAGTCGTGTTGCATCTGGTTCTGCCGGCAACACTAGCCCTGGAGGCTTTCCTATCAATCGACCTGGTTTTGGGGGCATGATGCCTGGGATGCCAGGAACGAGGAAGATGCCTGGTATGCCAGGTATGGATAATGACAATTGGGAGGTACCTAGGGCTCGTTCTATAACAAGGGGGGCAGATGGATCTGGTATCCAGTCTGCTGGACGTGGTCAACCGTTGGTTGGCAAAGCACCAACATTAAATGCAAGGCTACTGCCCCAAGGTACCGGTGGGCTCATTAGTAATAAGACTAGTGCTCTATTGCAAGGTCAGGGTGCAGGTGGATCCACTACTCGTCCTGTTAACTTTGGGCATGGATTAGAGCCTTCTGGTCAGGTTCATAAACCTGTTACAGCACCGACAGTTCTTTCACCGGCCGAGAGACAACAGGCTCCAGTCACATCTTTAAAACAAGATGATCTCAAAAAGAAAACTCTCTCCCTTCTTGAAGAATACTTCAGTATCCGGCTTCTGGATGAAGCTTTACAGTGCGTGGAAGAACTCATGTCACCGGCTTACCACCCTGAGGTAGTAAAAGAAGCCATTTCCTTGGCTCTAGAGAAAAGCCCACCCTGTGTTGAAGCAGTTGTAAAGTTTCTTGACTATTTACTCTCCAAGAAGGTCTTTACAACCGGTGACATTGAAACTGGATGTTTGGGATATGCGTCTATGCTCCATGACGCAGGTATTGATTTGCCAAAAGCGCCCATCAATTTTGGTGAGATAATTGGGAAACTTGTTCTATCCCGGTGTTTAGATTTTCAGGTGGTGAAAGAAGCCATTAAGAAGGTGGAAGATGACAGGTTCAGGAAAGATGTATTTGATGCTGTCTTGCAAACTATCCGCTCTAATATGTCTGGGCAAGGATTATTGGATTCATTGGCATCGGATATCGAGGAATGTCGAAGTCTGGCATATTAA 2403 45.61 MQKGDQTVLSLRPGGGRPRLLGPRFDLSSSSSSSSSSSSFAFGSFSSDLPTLRPHAASSASFSVKGGDSRFEGRERVRYTRDQLLQLREGVEVPDDILKIKREIDVEIFGEEQSWSRGESNQLNQSQNRYSEPDNRDWRGRSAQFSASGEERSRETNRDRDFGGHFDSRQQDANNLNRQDSHSSWTRTTSNQGGAPPALIKAEVPWSARRGNLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQESERRDKDRLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLKELTTHTQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVNIRNSRVASGSAGNTSPGGFPINRPGFGGMMPGMPGTRKMPGMPGMDNDNWEVPRARSITRGADGSGIQSAGRGQPLVGKAPTLNARLLPQGTGGLISNKTSALLQGQGAGGSTTRPVNFGHGLEPSGQVHKPVTAPTVLSPAERQQAPVTSLKQDDLKKKTLSLLEEYFSIRLLDEALQCVEELMSPAYHPEVVKEAISLALEKSPPCVEAVVKFLDYLLSKKVFTTGDIETGCLGYASMLHDAGIDLPKAPINFGEIIGKLVLSRCLDFQVVKEAIKKVEDDRFRKDVFDAVLQTIRSNMSGQGLLDSLASDIEECRSLAY 800
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15353771 15359172 + MELO3C010207.2.1 Cme02g01042 320931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01042 800 Gene3D - 211 446 - -
Cme02g01042 800 MobiDBLite consensus disorder prediction 114 131 - -
Cme02g01042 800 MobiDBLite consensus disorder prediction 25 44 - -
Cme02g01042 800 SMART if4_15 220 445 IPR003890 GO:0003723|GO:0005515
Cme02g01042 800 SUPERFAMILY ARM repeat 213 448 IPR016024 -
Cme02g01042 800 MobiDBLite consensus disorder prediction 151 167 - -
Cme02g01042 800 SUPERFAMILY ARM repeat 630 788 IPR016024 -
Cme02g01042 800 MobiDBLite consensus disorder prediction 483 503 - -
Cme02g01042 800 MobiDBLite consensus disorder prediction 113 197 - -
Cme02g01042 800 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 798 IPR045208 GO:0003743
Cme02g01042 800 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 798 - -
Cme02g01042 800 MobiDBLite consensus disorder prediction 168 195 - -
Cme02g01042 800 Pfam MIF4G domain 220 445 IPR003890 GO:0003723|GO:0005515
Cme02g01042 800 Gene3D - 628 794 - -
Cme02g01042 800 Pfam MA3 domain 635 747 IPR003891 -
Cme02g01042 800 MobiDBLite consensus disorder prediction 1 44 - -
Cme02g01042 800 SMART ma3_7 635 747 IPR003891 -
Cme02g01042 800 ProSiteProfiles MI domain profile. 634 756 IPR003891 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01042 Cme05g01290 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01042 Cme-Chr2:15353771 Cme05g00798 Cme-Chr5:10069097 2.11E-63 dispersed
Cme06g00346 Cme-Chr6:2143098 Cme02g01042 Cme-Chr2:15353771 1.57E-54 transposed
Cme02g01042 Cme-Chr2:15353771 Cme07g00133 Cme-Chr7:870114 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01042 K03260 - csv:101207520 1472.6