Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01098 ATGGCATTTGATCAGAACGCCATTCCTACAGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGATTCCCATCTAACGCCGATTGCTAATACTGGTCGAAACCACCAAAGGGTTACTCCTTTGCATCCCTGCGACATTGCCAATGCAGACACTTTGCCTGTTCCTTGTAAGGGGAATGTCTCTGATATGGGACTTGTTGAGCTAGGATATCGAAATTTAGTTGCTGGTGTTACCGCATGGTGCCCTAGAATGCCTCCTCCCCTTGCGCATACTGCAACGGTTCCTGCCGTAGGACTTGGTTATGTCATGAGCAATCGTAGAGGTGCCAATGCCATTGAGCTTGCTAGTAGTTGCATAACAGTTGGGCCTAATCATAATACAAATTTAGGTCATCGAGTTGGGGGAGGTGGAGTGGAATTTGTAAGCAGTAATATGTCAATGGGATCTGGGGATAGTACCAATTTATGCAATAAGGTGACTGGTAATGATGAACAAATTAGTAGTGATAGTACTTCTGGATTTAGCTCTCACTTGAGGAGTCCGGTTGGTGGAAATGGTGGAAATGCGGTTGATCAAGTGAGTGAGGAGGGTGGAGATGGTTCCATTTCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTCGGCGGCAAGATTTTTCCTAGACCGAGTGATGGTATGTTGAGATACATTGGAGGCCAAACAAGGATTATAAGTGTTAGAAGAGATGTGACTTTCAATGAGCTTGAGCGAAAGATGGCTGATACCTGCGGGCAGGCTGTGGTTATAAAGTATCAGCTCCCTGATGAGGATCTTGACGCTTTAATATCTGTTTCATGTCCTGATGATCTTGATAATATGATGGATGAGTATGAGAAGCTGGTTGAGAGGTCTTCAGATGGATCAGCTAAATTGAGGATGTTTTTGTTCTCTGCTTCAGAACTTGACTCTTCAGGTATGGTGCAATTTGGCGATTTGCATGATAGTGGGCAGAGATATGTTGAAACGGTGAATGGGATATTTGATGGTGTTAGTGGCCGTATTACAAGGAAAGAGAGCTGTGTAAGTGCTACCTCAACTCAGAATTCTGACTTAAGTGGGACTGAGGCAATGGATATCCCAAATAATGATCTAGGGGTTGTGAGCGGACCTCCATCCACAACATTGCCCTTACCTGGAGGAAATTTAGGTACTGCAGTTGCTATTGGCCCTGGATTGGTGAAGGTTGATCCCGTCTCTGCAGTTTTGTTAGATGCCTCTGCTGTTCCATCAAGCATTCCTGTGGTTAACCCTGTTCCTCCTGGAGCTTCTTTCCAGCCTGAGATAGAGTTGGGAAGGTCTGTGCCTGTTACTCTAATGCAGCAGCAACCGGGTGTTGAACTTTCTCCACCTGTGTCTTGTTTACAGCCTACTGGTGATCCTCGACAAGCAGCATGTGTGGACTTCATACAATTTCGTCCACAACTAGGCTTTCCAAACTCCCATCATATAGGGGCATCTGGATCTGTGTTTATACAACAGCCAAATACTCTTGGGATTACTCCTCATCAGTTTGTCCCTGCAGTTCACATGACAATGGCTCCTTCTTCTCGCCCCGGTGTTATGCCAAATGCCTACCAATCGTTGGTTCAATATCCACAATCCCAGACAGAATGTTTTTCCAACCCAAGCACATTTGGTCCAAGGGTTGTCCAGCTATCAGCAGAACAAGGCTACAACTCAGTCCAGGTTCCAGCTCCTCCAGTATCAGTAGGGGTTGGATTTGGTTTACATCAGGTACCTTGGTCTGATCAGACAGTTACATCTGATGAATTGGCATCTCATCATCAGGCAACTTTTCCTGAGAAGATTGAGAGGTTGGATGACTGTTACTTCTGCCAGAAAGCAATGCCACATGCTCATTCCAATTCTTCATTGCAGGATCAAAGCGATAATTTGGCGAACCCTGTAACTGATTCAAAATTTTCGTATTACAGTCATCACCCTGAAGATCATTTAACAGCCCATCCAATGAAAAATGTCACAGAAACTGTAGCTTTGGGGCAATCTACAATTGAACATGGTGTTGGAGTTCAAACCAGGATCTTTAATCCCACAGATCCAGAAGTTGAAAAACCTTCTGTGGAGGCTATTAGCTTCCCACAACACTTGGAGGATCGACATGAGAATGAAAACACTCTAAAAGATCAATGTAATCATGATCCTGCTAGGATCTCAGCTCCCCAAGGTGCTCTTGGGAGGCAAGGTGATTTCCAGTCACCCCATGTTGCTGTTGTAGAACAGATTCCTCAGTGTGGTGAAATTGATACTCTCCAGCACCATCATGTAGCTGTAGAGAATCAGTTCCATCCAAATTTAGTCGTGGATAGACACAATATTTGCTTTAGCGCTGCTCCTTTTCTTGCTTCAGAGTACAACACTCACGACAATCCGAAAGAATATTCTAATAGTCATCCTGACATCATTCCAAACCAAAATGCTACCCTCACTGGAATTCAGCATGACCATCTCGGACCAATTGTTGGAAATTTGGAAAGTCTAAGTATATGCCCACCTGATATTTGTGCTAATTTGGATCACTGCAAATCACCCATTGAAAGAACTAGGAAGGAGGACAATTTTGGAAACTGTTTACAACCAGTCTCAGAGAGGGAAGTTCTACTAGACAACAACTTTGTAAAGCCAATGACGTTTCTTGACCCAAATCACATAAAATCAACTACGTTCGCTTGCTCTTCATTAGAGGTTCCCTATTTGATGAATGAAAGGCCTGTTGAGTCCAGTGAAGTGACACAACCTTCTGTCGGGGGCTCTCCCGGAACACTACCACAAACAGAAAAGGGGATACAATATTTAGAATCCAATGAAGTCTGTCATAGCAGAAATCTCCACCTATTTGACATGAAGACTGAACAAAGAAATAATGAAATCCCAGTTTCTGCTGAATGGAAGGACCCTTCTCTATTTGAATCCAGGATAGTATCTGGTGATGTTGAATCCGTGTCTTTGCCTATCAGGACTGGAAATGTAGAGGACACTGCGAATTCACTTTTCAGCAATCAGGATCCTTGGAACTTGCAGCACGACACTCATCTTTTGCCTCCTAGACCAAATAAAATCCAACCAAGGAATGAAGCCCTTGCCACCAGGGAACCCTTGACAGAGACTCCTTTCAGAAACGTTGGTGAACTAAATGTGGAAACGTTACTGGATGATGGAGTATGTCACTCATTGGTTAATTCAAACAAGGGCTCTTCAGAGGAACAAATTAGGAAAGATCTCCAAGCTGTTGCTGAGGGAGTGGCTGCTTCTGTTCTTCAGTCAGCTCAATCCTCCAACTCTGAATTGAATGAAAGAAGCAGTTCAGTTTGTGAGACTAGCACCGAAAGAGATGTTCAAAATAATGATGTGGATGGCAGGACAAGACATTCAGATAAAGCAAATATTGGTTTTCCAATGTCAGAAGGCCTTGGCCGCTTGCAGGTAATAAAGAATAGCGACCTTGAAGAATTAAGAGAATTGGGGTCTGGCACCTTTGGCACTGTTTATCATGGAAAATGGAGGGGAACTGATGTTGCTATCAAACGAGTCAATGATAGGTGTTTTGCTGGAAAGCCTTCTGAACAAGATCGCATGAGAGAAGATTTTTGGAATGAAGCAATTAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTATGGTGTTGTGCTTGATGGTCCTGGGGGATCTGTAGCCACAGTAACAGAATATATGGTCAATGGTTCGCTCAGAAATGCTTTGTTGAAGAATGAAAAGAGTCTTGACAAGCGGAAGCGCCTCTTGATTGCTATGGATGCGGCTTTTGGAATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTGAAAAGTGATAACCTGCTGGTCAATCTTCGAGATCCTCATCGCCCAATATGCAAGGTTGGTGACTTGGGCCTGTCAAAGGTGAAACGTCAGACATTGATTTCAGGTGGTGTGCGAGGAACACTTCCATGGATGGCACCTGAGCTTTTGAATGGTAGTAGCAATATGGTATCTGAGAAGGTCGATGTGTTTTCCTTCGGTATTGTCTTGTGGGAGCTCCTTACTGGAGAAGAACCTTATGCAAATTTGCATTATGGGGTTATTATAGGTGGCATAGTAAGCAACACATTGCGACCAGAAGTACCGGAGTCTTGTGATCCAGAATGGAGGTCACTGATGGAGAGATGCTGGTCATCAGAGCCATTAGAGAGGCCAAGCTTCACTGACATTGCAAGTGAACTCCGCTCCATGGCCGCAAAAGTTCCTTCGAAAGTACCCAACTAG 4335 43.9 MAFDQNAIPTGLRPLNVARTLVEDSHLTPIANTGRNHQRVTPLHPCDIANADTLPVPCKGNVSDMGLVELGYRNLVAGVTAWCPRMPPPLAHTATVPAVGLGYVMSNRRGANAIELASSCITVGPNHNTNLGHRVGGGGVEFVSSNMSMGSGDSTNLCNKVTGNDEQISSDSTSGFSSHLRSPVGGNGGNAVDQVSEEGGDGSISKKKVKFMCSFGGKIFPRPSDGMLRYIGGQTRIISVRRDVTFNELERKMADTCGQAVVIKYQLPDEDLDALISVSCPDDLDNMMDEYEKLVERSSDGSAKLRMFLFSASELDSSGMVQFGDLHDSGQRYVETVNGIFDGVSGRITRKESCVSATSTQNSDLSGTEAMDIPNNDLGVVSGPPSTTLPLPGGNLGTAVAIGPGLVKVDPVSAVLLDASAVPSSIPVVNPVPPGASFQPEIELGRSVPVTLMQQQPGVELSPPVSCLQPTGDPRQAACVDFIQFRPQLGFPNSHHIGASGSVFIQQPNTLGITPHQFVPAVHMTMAPSSRPGVMPNAYQSLVQYPQSQTECFSNPSTFGPRVVQLSAEQGYNSVQVPAPPVSVGVGFGLHQVPWSDQTVTSDELASHHQATFPEKIERLDDCYFCQKAMPHAHSNSSLQDQSDNLANPVTDSKFSYYSHHPEDHLTAHPMKNVTETVALGQSTIEHGVGVQTRIFNPTDPEVEKPSVEAISFPQHLEDRHENENTLKDQCNHDPARISAPQGALGRQGDFQSPHVAVVEQIPQCGEIDTLQHHHVAVENQFHPNLVVDRHNICFSAAPFLASEYNTHDNPKEYSNSHPDIIPNQNATLTGIQHDHLGPIVGNLESLSICPPDICANLDHCKSPIERTRKEDNFGNCLQPVSEREVLLDNNFVKPMTFLDPNHIKSTTFACSSLEVPYLMNERPVESSEVTQPSVGGSPGTLPQTEKGIQYLESNEVCHSRNLHLFDMKTEQRNNEIPVSAEWKDPSLFESRIVSGDVESVSLPIRTGNVEDTANSLFSNQDPWNLQHDTHLLPPRPNKIQPRNEALATREPLTETPFRNVGELNVETLLDDGVCHSLVNSNKGSSEEQIRKDLQAVAEGVAASVLQSAQSSNSELNERSSSVCETSTERDVQNNDVDGRTRHSDKANIGFPMSEGLGRLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRVNDRCFAGKPSEQDRMREDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALLKNEKSLDKRKRLLIAMDAAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLHYGVIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSEPLERPSFTDIASELRSMAAKVPSKVPN 1444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15964784 15972410 - MELO3C010263.2.1 Cme02g01098 320987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01098 1444 MobiDBLite consensus disorder prediction 1108 1150 - -
Cme02g01098 1444 MobiDBLite consensus disorder prediction 1131 1145 - -
Cme02g01098 1444 MobiDBLite consensus disorder prediction 1108 1130 - -
Cme02g01098 1444 Pfam PB1 domain 228 311 IPR000270 GO:0005515
Cme02g01098 1444 CDD PB1_UP2 212 310 - -
Cme02g01098 1444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1293 1305 IPR008271 GO:0004672|GO:0006468
Cme02g01098 1444 SUPERFAMILY Protein kinase-like (PK-like) 1160 1429 IPR011009 -
Cme02g01098 1444 SMART serkin_6 1168 1434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01098 1444 Gene3D Transferase(Phosphotransferase) domain 1 1256 1442 - -
Cme02g01098 1444 Pfam Protein tyrosine and serine/threonine kinase 1169 1431 IPR001245 GO:0004672|GO:0006468
Cme02g01098 1444 ProSitePatterns Protein kinases ATP-binding region signature. 1174 1205 IPR017441 GO:0005524
Cme02g01098 1444 PRINTS Tyrosine kinase catalytic domain signature 1250 1263 IPR001245 GO:0004672|GO:0006468
Cme02g01098 1444 PRINTS Tyrosine kinase catalytic domain signature 1287 1305 IPR001245 GO:0004672|GO:0006468
Cme02g01098 1444 PRINTS Tyrosine kinase catalytic domain signature 1358 1380 IPR001245 GO:0004672|GO:0006468
Cme02g01098 1444 PRINTS Tyrosine kinase catalytic domain signature 1402 1424 IPR001245 GO:0004672|GO:0006468
Cme02g01098 1444 SUPERFAMILY CAD & PB1 domains 224 316 - -
Cme02g01098 1444 Gene3D Phosphorylase Kinase; domain 1 1161 1255 - -
Cme02g01098 1444 MobiDBLite consensus disorder prediction 167 184 - -
Cme02g01098 1444 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 165 1438 - -
Cme02g01098 1444 MobiDBLite consensus disorder prediction 723 749 - -
Cme02g01098 1444 PANTHER SERINE-THREONINE PROTEIN KINASE 165 1438 - -
Cme02g01098 1444 CDD STKc_MAP3K-like 1174 1431 - -
Cme02g01098 1444 Gene3D - 230 312 - -
Cme02g01098 1444 ProSiteProfiles Protein kinase domain profile. 1168 1435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01098 1444 SMART PB1_new 223 312 IPR000270 GO:0005515
Cme02g01098 1444 MobiDBLite consensus disorder prediction 167 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01098 Cme-Chr2:15964784 Cme12g01538 Cme-Chr12:22845384 5.27E-32 dispersed
Cme10g00226 Cme-Chr10:1516549 Cme02g01098 Cme-Chr2:15964784 3.49E-25 dispersed
Cme10g00571 Cme-Chr10:3659581 Cme02g01098 Cme-Chr2:15964784 3.14E-29 dispersed
Cme02g01098 Cme-Chr2:15964784 Cme04g02435 Cme-Chr4:30989682 1.47E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64686 PF07714 PK_Tyr_Ser-Thr 2.50E-59 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01098 - - csv:101203826 2672.89