Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g01098 | ATGGCATTTGATCAGAACGCCATTCCTACAGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGATTCCCATCTAACGCCGATTGCTAATACTGGTCGAAACCACCAAAGGGTTACTCCTTTGCATCCCTGCGACATTGCCAATGCAGACACTTTGCCTGTTCCTTGTAAGGGGAATGTCTCTGATATGGGACTTGTTGAGCTAGGATATCGAAATTTAGTTGCTGGTGTTACCGCATGGTGCCCTAGAATGCCTCCTCCCCTTGCGCATACTGCAACGGTTCCTGCCGTAGGACTTGGTTATGTCATGAGCAATCGTAGAGGTGCCAATGCCATTGAGCTTGCTAGTAGTTGCATAACAGTTGGGCCTAATCATAATACAAATTTAGGTCATCGAGTTGGGGGAGGTGGAGTGGAATTTGTAAGCAGTAATATGTCAATGGGATCTGGGGATAGTACCAATTTATGCAATAAGGTGACTGGTAATGATGAACAAATTAGTAGTGATAGTACTTCTGGATTTAGCTCTCACTTGAGGAGTCCGGTTGGTGGAAATGGTGGAAATGCGGTTGATCAAGTGAGTGAGGAGGGTGGAGATGGTTCCATTTCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTCGGCGGCAAGATTTTTCCTAGACCGAGTGATGGTATGTTGAGATACATTGGAGGCCAAACAAGGATTATAAGTGTTAGAAGAGATGTGACTTTCAATGAGCTTGAGCGAAAGATGGCTGATACCTGCGGGCAGGCTGTGGTTATAAAGTATCAGCTCCCTGATGAGGATCTTGACGCTTTAATATCTGTTTCATGTCCTGATGATCTTGATAATATGATGGATGAGTATGAGAAGCTGGTTGAGAGGTCTTCAGATGGATCAGCTAAATTGAGGATGTTTTTGTTCTCTGCTTCAGAACTTGACTCTTCAGGTATGGTGCAATTTGGCGATTTGCATGATAGTGGGCAGAGATATGTTGAAACGGTGAATGGGATATTTGATGGTGTTAGTGGCCGTATTACAAGGAAAGAGAGCTGTGTAAGTGCTACCTCAACTCAGAATTCTGACTTAAGTGGGACTGAGGCAATGGATATCCCAAATAATGATCTAGGGGTTGTGAGCGGACCTCCATCCACAACATTGCCCTTACCTGGAGGAAATTTAGGTACTGCAGTTGCTATTGGCCCTGGATTGGTGAAGGTTGATCCCGTCTCTGCAGTTTTGTTAGATGCCTCTGCTGTTCCATCAAGCATTCCTGTGGTTAACCCTGTTCCTCCTGGAGCTTCTTTCCAGCCTGAGATAGAGTTGGGAAGGTCTGTGCCTGTTACTCTAATGCAGCAGCAACCGGGTGTTGAACTTTCTCCACCTGTGTCTTGTTTACAGCCTACTGGTGATCCTCGACAAGCAGCATGTGTGGACTTCATACAATTTCGTCCACAACTAGGCTTTCCAAACTCCCATCATATAGGGGCATCTGGATCTGTGTTTATACAACAGCCAAATACTCTTGGGATTACTCCTCATCAGTTTGTCCCTGCAGTTCACATGACAATGGCTCCTTCTTCTCGCCCCGGTGTTATGCCAAATGCCTACCAATCGTTGGTTCAATATCCACAATCCCAGACAGAATGTTTTTCCAACCCAAGCACATTTGGTCCAAGGGTTGTCCAGCTATCAGCAGAACAAGGCTACAACTCAGTCCAGGTTCCAGCTCCTCCAGTATCAGTAGGGGTTGGATTTGGTTTACATCAGGTACCTTGGTCTGATCAGACAGTTACATCTGATGAATTGGCATCTCATCATCAGGCAACTTTTCCTGAGAAGATTGAGAGGTTGGATGACTGTTACTTCTGCCAGAAAGCAATGCCACATGCTCATTCCAATTCTTCATTGCAGGATCAAAGCGATAATTTGGCGAACCCTGTAACTGATTCAAAATTTTCGTATTACAGTCATCACCCTGAAGATCATTTAACAGCCCATCCAATGAAAAATGTCACAGAAACTGTAGCTTTGGGGCAATCTACAATTGAACATGGTGTTGGAGTTCAAACCAGGATCTTTAATCCCACAGATCCAGAAGTTGAAAAACCTTCTGTGGAGGCTATTAGCTTCCCACAACACTTGGAGGATCGACATGAGAATGAAAACACTCTAAAAGATCAATGTAATCATGATCCTGCTAGGATCTCAGCTCCCCAAGGTGCTCTTGGGAGGCAAGGTGATTTCCAGTCACCCCATGTTGCTGTTGTAGAACAGATTCCTCAGTGTGGTGAAATTGATACTCTCCAGCACCATCATGTAGCTGTAGAGAATCAGTTCCATCCAAATTTAGTCGTGGATAGACACAATATTTGCTTTAGCGCTGCTCCTTTTCTTGCTTCAGAGTACAACACTCACGACAATCCGAAAGAATATTCTAATAGTCATCCTGACATCATTCCAAACCAAAATGCTACCCTCACTGGAATTCAGCATGACCATCTCGGACCAATTGTTGGAAATTTGGAAAGTCTAAGTATATGCCCACCTGATATTTGTGCTAATTTGGATCACTGCAAATCACCCATTGAAAGAACTAGGAAGGAGGACAATTTTGGAAACTGTTTACAACCAGTCTCAGAGAGGGAAGTTCTACTAGACAACAACTTTGTAAAGCCAATGACGTTTCTTGACCCAAATCACATAAAATCAACTACGTTCGCTTGCTCTTCATTAGAGGTTCCCTATTTGATGAATGAAAGGCCTGTTGAGTCCAGTGAAGTGACACAACCTTCTGTCGGGGGCTCTCCCGGAACACTACCACAAACAGAAAAGGGGATACAATATTTAGAATCCAATGAAGTCTGTCATAGCAGAAATCTCCACCTATTTGACATGAAGACTGAACAAAGAAATAATGAAATCCCAGTTTCTGCTGAATGGAAGGACCCTTCTCTATTTGAATCCAGGATAGTATCTGGTGATGTTGAATCCGTGTCTTTGCCTATCAGGACTGGAAATGTAGAGGACACTGCGAATTCACTTTTCAGCAATCAGGATCCTTGGAACTTGCAGCACGACACTCATCTTTTGCCTCCTAGACCAAATAAAATCCAACCAAGGAATGAAGCCCTTGCCACCAGGGAACCCTTGACAGAGACTCCTTTCAGAAACGTTGGTGAACTAAATGTGGAAACGTTACTGGATGATGGAGTATGTCACTCATTGGTTAATTCAAACAAGGGCTCTTCAGAGGAACAAATTAGGAAAGATCTCCAAGCTGTTGCTGAGGGAGTGGCTGCTTCTGTTCTTCAGTCAGCTCAATCCTCCAACTCTGAATTGAATGAAAGAAGCAGTTCAGTTTGTGAGACTAGCACCGAAAGAGATGTTCAAAATAATGATGTGGATGGCAGGACAAGACATTCAGATAAAGCAAATATTGGTTTTCCAATGTCAGAAGGCCTTGGCCGCTTGCAGGTAATAAAGAATAGCGACCTTGAAGAATTAAGAGAATTGGGGTCTGGCACCTTTGGCACTGTTTATCATGGAAAATGGAGGGGAACTGATGTTGCTATCAAACGAGTCAATGATAGGTGTTTTGCTGGAAAGCCTTCTGAACAAGATCGCATGAGAGAAGATTTTTGGAATGAAGCAATTAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTATGGTGTTGTGCTTGATGGTCCTGGGGGATCTGTAGCCACAGTAACAGAATATATGGTCAATGGTTCGCTCAGAAATGCTTTGTTGAAGAATGAAAAGAGTCTTGACAAGCGGAAGCGCCTCTTGATTGCTATGGATGCGGCTTTTGGAATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTGAAAAGTGATAACCTGCTGGTCAATCTTCGAGATCCTCATCGCCCAATATGCAAGGTTGGTGACTTGGGCCTGTCAAAGGTGAAACGTCAGACATTGATTTCAGGTGGTGTGCGAGGAACACTTCCATGGATGGCACCTGAGCTTTTGAATGGTAGTAGCAATATGGTATCTGAGAAGGTCGATGTGTTTTCCTTCGGTATTGTCTTGTGGGAGCTCCTTACTGGAGAAGAACCTTATGCAAATTTGCATTATGGGGTTATTATAGGTGGCATAGTAAGCAACACATTGCGACCAGAAGTACCGGAGTCTTGTGATCCAGAATGGAGGTCACTGATGGAGAGATGCTGGTCATCAGAGCCATTAGAGAGGCCAAGCTTCACTGACATTGCAAGTGAACTCCGCTCCATGGCCGCAAAAGTTCCTTCGAAAGTACCCAACTAG | 4335 | 43.9 | MAFDQNAIPTGLRPLNVARTLVEDSHLTPIANTGRNHQRVTPLHPCDIANADTLPVPCKGNVSDMGLVELGYRNLVAGVTAWCPRMPPPLAHTATVPAVGLGYVMSNRRGANAIELASSCITVGPNHNTNLGHRVGGGGVEFVSSNMSMGSGDSTNLCNKVTGNDEQISSDSTSGFSSHLRSPVGGNGGNAVDQVSEEGGDGSISKKKVKFMCSFGGKIFPRPSDGMLRYIGGQTRIISVRRDVTFNELERKMADTCGQAVVIKYQLPDEDLDALISVSCPDDLDNMMDEYEKLVERSSDGSAKLRMFLFSASELDSSGMVQFGDLHDSGQRYVETVNGIFDGVSGRITRKESCVSATSTQNSDLSGTEAMDIPNNDLGVVSGPPSTTLPLPGGNLGTAVAIGPGLVKVDPVSAVLLDASAVPSSIPVVNPVPPGASFQPEIELGRSVPVTLMQQQPGVELSPPVSCLQPTGDPRQAACVDFIQFRPQLGFPNSHHIGASGSVFIQQPNTLGITPHQFVPAVHMTMAPSSRPGVMPNAYQSLVQYPQSQTECFSNPSTFGPRVVQLSAEQGYNSVQVPAPPVSVGVGFGLHQVPWSDQTVTSDELASHHQATFPEKIERLDDCYFCQKAMPHAHSNSSLQDQSDNLANPVTDSKFSYYSHHPEDHLTAHPMKNVTETVALGQSTIEHGVGVQTRIFNPTDPEVEKPSVEAISFPQHLEDRHENENTLKDQCNHDPARISAPQGALGRQGDFQSPHVAVVEQIPQCGEIDTLQHHHVAVENQFHPNLVVDRHNICFSAAPFLASEYNTHDNPKEYSNSHPDIIPNQNATLTGIQHDHLGPIVGNLESLSICPPDICANLDHCKSPIERTRKEDNFGNCLQPVSEREVLLDNNFVKPMTFLDPNHIKSTTFACSSLEVPYLMNERPVESSEVTQPSVGGSPGTLPQTEKGIQYLESNEVCHSRNLHLFDMKTEQRNNEIPVSAEWKDPSLFESRIVSGDVESVSLPIRTGNVEDTANSLFSNQDPWNLQHDTHLLPPRPNKIQPRNEALATREPLTETPFRNVGELNVETLLDDGVCHSLVNSNKGSSEEQIRKDLQAVAEGVAASVLQSAQSSNSELNERSSSVCETSTERDVQNNDVDGRTRHSDKANIGFPMSEGLGRLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRVNDRCFAGKPSEQDRMREDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALLKNEKSLDKRKRLLIAMDAAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLHYGVIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSEPLERPSFTDIASELRSMAAKVPSKVPN | 1444 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15964784 | 15972410 | - | MELO3C010263.2.1 | Cme02g01098 | 320987 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g01098 | 1444 | MobiDBLite | consensus disorder prediction | 1108 | 1150 | - | - | |
Cme02g01098 | 1444 | MobiDBLite | consensus disorder prediction | 1131 | 1145 | - | - | |
Cme02g01098 | 1444 | MobiDBLite | consensus disorder prediction | 1108 | 1130 | - | - | |
Cme02g01098 | 1444 | Pfam | PB1 domain | 228 | 311 | IPR000270 | GO:0005515 | |
Cme02g01098 | 1444 | CDD | PB1_UP2 | 212 | 310 | - | - | |
Cme02g01098 | 1444 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1293 | 1305 | IPR008271 | GO:0004672|GO:0006468 | |
Cme02g01098 | 1444 | SUPERFAMILY | Protein kinase-like (PK-like) | 1160 | 1429 | IPR011009 | - | |
Cme02g01098 | 1444 | SMART | serkin_6 | 1168 | 1434 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme02g01098 | 1444 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1256 | 1442 | - | - | |
Cme02g01098 | 1444 | Pfam | Protein tyrosine and serine/threonine kinase | 1169 | 1431 | IPR001245 | GO:0004672|GO:0006468 | |
Cme02g01098 | 1444 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1174 | 1205 | IPR017441 | GO:0005524 | |
Cme02g01098 | 1444 | PRINTS | Tyrosine kinase catalytic domain signature | 1250 | 1263 | IPR001245 | GO:0004672|GO:0006468 | |
Cme02g01098 | 1444 | PRINTS | Tyrosine kinase catalytic domain signature | 1287 | 1305 | IPR001245 | GO:0004672|GO:0006468 | |
Cme02g01098 | 1444 | PRINTS | Tyrosine kinase catalytic domain signature | 1358 | 1380 | IPR001245 | GO:0004672|GO:0006468 | |
Cme02g01098 | 1444 | PRINTS | Tyrosine kinase catalytic domain signature | 1402 | 1424 | IPR001245 | GO:0004672|GO:0006468 | |
Cme02g01098 | 1444 | SUPERFAMILY | CAD & PB1 domains | 224 | 316 | - | - | |
Cme02g01098 | 1444 | Gene3D | Phosphorylase Kinase; domain 1 | 1161 | 1255 | - | - | |
Cme02g01098 | 1444 | MobiDBLite | consensus disorder prediction | 167 | 184 | - | - | |
Cme02g01098 | 1444 | PANTHER | KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN | 165 | 1438 | - | - | |
Cme02g01098 | 1444 | MobiDBLite | consensus disorder prediction | 723 | 749 | - | - | |
Cme02g01098 | 1444 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 165 | 1438 | - | - | |
Cme02g01098 | 1444 | CDD | STKc_MAP3K-like | 1174 | 1431 | - | - | |
Cme02g01098 | 1444 | Gene3D | - | 230 | 312 | - | - | |
Cme02g01098 | 1444 | ProSiteProfiles | Protein kinase domain profile. | 1168 | 1435 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme02g01098 | 1444 | SMART | PB1_new | 223 | 312 | IPR000270 | GO:0005515 | |
Cme02g01098 | 1444 | MobiDBLite | consensus disorder prediction | 167 | 203 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g01098 | Cme-Chr2:15964784 | Cme12g01538 | Cme-Chr12:22845384 | 5.27E-32 | dispersed | |
Cme10g00226 | Cme-Chr10:1516549 | Cme02g01098 | Cme-Chr2:15964784 | 3.49E-25 | dispersed | |
Cme10g00571 | Cme-Chr10:3659581 | Cme02g01098 | Cme-Chr2:15964784 | 3.14E-29 | dispersed | |
Cme02g01098 | Cme-Chr2:15964784 | Cme04g02435 | Cme-Chr4:30989682 | 1.47E-48 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64686 | PF07714 | PK_Tyr_Ser-Thr | 2.50E-59 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g01098 | - | - | csv:101203826 | 2672.89 |