Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01129 ATGGGCGCCACCATTCTTCCAGATCTCGGTGCTCAGATTTTCATTCCTCTTTGTGCTATTATTGGAATCCTTTTTTCTTTAGTCCAGTGGTACTACGTTTCACAAGTTAAACTCTCTTCTGCTCGTGATTCCGCTAATAACAACTCCTCTTCTGCTAAAAATGGCTACTCTGACTACCTTATTGAAGAGGAAGAAGGTGTTAATGACCATAACGTTGTTATTAAATGTGCCGAAATTCAAAACGCCATCTCTGAGGGGGCAACCTCCTTCCTTTTCACGGAGTACAAGTATGTTGGCATCTTTATGATATTGTTTGCAGCATTGATTTTTGTATTCCTTGGATCAGTGGAGGGTTTTAGTACCAAGCCCCAACCGTGCTCATATGACAAAACAAAAACTTGTAAGCCAGCTTTGGCAACGGCTACATTCAGTACTATATCATTTCTGCTTGGTGCAGTTACTTCAGTGGTTTCTGGTTTTCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAACGGTCTCTTGGTTTTGTTTATTGCCATTAACATCTTCAAATTGTACTATGGTGAAGATTGGGGTGGTCTTTTCGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACTAAAGCTGCTGATGTTGGTGCCGACCTTGTGGGTAAGGTGGAAAGGAACATTCCTGAGGACGACCCAAGAAATCCAGCTGTGATTGCTGATAATGTGGGTGACAACGTTGGGGATATTGCGGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAGTCATCCTGTGCTGCTCTCGTTGTTGCTTCTATCTCCTCTTTCGGCAACAACCATGAGTTCACAGCAATGCTCTATCCACTCATCGTTAGTTCTATGGGTATCCTTGTCTGCCTGGTCACCACTTTATTTGCAACGGATTTTTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAAAATCAACTCATTATTTCCACTGTTATAATGACCTTTGGAATTGCAATTGTTACTTGGGTGGGTGTTCCAGCAAAATTCACCATCTTCAACTTTGGAACTCAAAAAGTTGTACAGAACTGGGAACTTTTCTTGTGCGTTGCTGTTGGTCTTTGGGCTGGGCTGATAATAGGATTTGTGACAGAGTACTATACTAGCAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCTTGTCGAACTGGAGCTGCTACAAATGTTATTTTTGGCTTGGCCTTGGGATACAAATCTGTCATTATCCCTATCTTTGCAATTGCAGTTAGTATTTTTGTGAGTTTCTCCTTTGCTGCAATGTACGGCATTGCTGTTGCGGCCCTTGGAATGTTGAGTACAATTGCTACTGGTTTGGCCATCGATGCGTACGGTCCAATCAGTGACAATGCTGGAGGCATTGCAGAGATGGCTGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTTGATGCTGCTGGAAACACAACTGCAGCAATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCTCTTGTGTCCCTTGCCCTCTTTGGTGCCTTCGTTAGCCGTGCTGGTGTTGTCGTTGTTGACCTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTTGGTGCTATGCTGCCATACTGGTTTTCTGCCATGACAATGAAGAGCGTTGGGAGTGCAGCCCTGAAGATGGTTGAGGAGGTCCGAAGGCAATTCAACACAATCCCAGGTCTCATGGAGGGTACTGCCAAGCCCGACTATGCTACATGTGTCAAGATCTCAACTGATGCTTCTATTAAGGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACACCCCTCATTGTTGGTATCCTATTTGGAGTCGAAACTCTTTCTGGTGTCCTTGCTGGATCCCTTGTTTCTGGTGTCCAGATTGCTATCTCCGCATCCAACACCGGAGGTGCCTGGGACAATGCTAAGAAGTACATCGAGGCTGGTACCTCTGAGCACGCAAGAACCCTTGGCCCGAAAGGATCAGATCCACACAAAGCTGCTGTTATCGGGGACACAATCGGAGACCCACTCAAGGATACATCTGGACCTTCTCTCAACATTCTCATCAAGTTGATGGCTGTGGAGTCACTCGTGTTTGCTCCTTTCTTTGCCAGCCACGGTGGTATTCTGTTCAAGATCTTCTAA 2307 45.38 MGATILPDLGAQIFIPLCAIIGILFSLVQWYYVSQVKLSSARDSANNNSSSAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMILFAALIFVFLGSVEGFSTKPQPCSYDKTKTCKPALATATFSTISFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINIFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHEFTAMLYPLIVSSMGILVCLVTTLFATDFFEIKAVKEIEPALKNQLIISTVIMTFGIAIVTWVGVPAKFTIFNFGTQKVVQNWELFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVVVVDLLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGTSEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGGILFKIF 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16296979 16301937 - MELO3C010286.2.1 Cme02g01129 321018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01129 768 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 12 763 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme02g01129 768 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 767 - -
Cme02g01129 768 PIRSF H+-PPtase 11 766 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme02g01129 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 767 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme02g01129 768 Pfam Inorganic H+ pyrophosphatase 22 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme02g01129 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02726 Cme-Chr1:34466928 Cme02g01129 Cme-Chr2:16296979 7.48E-152 dispersed
Cme02g01129 Cme-Chr2:16296979 Cme05g01560 Cme-Chr5:24875677 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01129 K23025 - csv:101222673 1469.91