Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01208 ATGGGGTACATTTGGTGGAATTTTGTGGCAATTTTAGCAATGGTTTTGCCAGTGAAATCTCAGCTGAGTGTTGGATTTTATTCAAAGTCTTGTCCTAAAGTTGAGTCCATTGTTAGGTCAACTGTTGAGTCTTATTTCAAGGCTGATCCTACCATTGCTGCTGGCTTGCTCAGGCTGCACTTCCATGATTGTTTTGTTCAGGGATGCGATGGCTCAGTATTGATAATGGATGAAAATGCTGAAATAAATGCAGGGCCAAACATGGGTTTAAGAGGATTTGAAGTCGTAGATGATGCAAAAGCCAAACTCGAAAATTTGTGTCCTGGTGTTGTTTCTTGTGCAGATATTCTTGCTTTGGCTACTCGTGATGCCGTATACTTGAGTGATGGTCCAAGTTGGTCCGTGCCCACTGGAAGAAGGGACGGAAAAGTTTCGATCAGTTTTGAAGCAGAAGACCTGCCTTCTCCATTCGAGCCCATCGATAACCACATACAAAAGTTTGCAGAGAAAGGCCTCGATGAAGAAGATCTTGTGACCTTAGTTGGTGCTCATACGGTCGGGCGAACGGATTGCCAACTATTCAGTTACCGTCTACAAAACTTCACAAGCACAGGGAATCCAGACCCAACCATAAGCCCATCGTTCTTGACTGAACTGAGAACTCTTTGTCCTTTAGATGGAGATCCATTCAGAGGAGTGGCCATGGACAAAGATAGCCAGTTGAAATTTGACAACAGCTTTTACAAGAACTTGATGAACGGAAATGGGGTTTTGGAGTCAGACCAAAGACTTTGGAGCCATCCGTCAACCAGAGATATTGTGAAGAGATATGGTGGAAACTTAAGGGGATTGTTGGGCCTCAGATTTAGCTTTGAGTTCAAGAAAGCTATGGTTAAGTTGAGTAGCATTGGTGTTAAGACTGGCACACAAGGGGAGATTAGAAAAGTTTGTTATCTGTTCAATAAGTAG 969 43.14 MGYIWWNFVAILAMVLPVKSQLSVGFYSKSCPKVESIVRSTVESYFKADPTIAAGLLRLHFHDCFVQGCDGSVLIMDENAEINAGPNMGLRGFEVVDDAKAKLENLCPGVVSCADILALATRDAVYLSDGPSWSVPTGRRDGKVSISFEAEDLPSPFEPIDNHIQKFAEKGLDEEDLVTLVGAHTVGRTDCQLFSYRLQNFTSTGNPDPTISPSFLTELRTLCPLDGDPFRGVAMDKDSQLKFDNSFYKNLMNGNGVLESDQRLWSHPSTRDIVKRYGGNLRGLLGLRFSFEFKKAMVKLSSIGVKTGTQGEIRKVCYLFNK 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17409595 17412330 + MELO3C010344.2.1 Cme02g01208 321097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01208 322 ProSiteProfiles Plant heme peroxidase family profile. 21 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Cme02g01208 322 CDD secretory_peroxidase 21 317 IPR033905 GO:0004601|GO:0042744
Cme02g01208 322 Gene3D Peroxidase, domain 2 154 300 - -
Cme02g01208 322 SUPERFAMILY Heme-dependent peroxidases 21 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 Pfam Peroxidase 38 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Cme02g01208 322 PANTHER PEROXIDASE 8 319 - -
Cme02g01208 322 PANTHER PEROXIDASE 25-RELATED 8 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g01208 322 Gene3D - 25 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00252 Cme-Chr1:1841521 Cme02g01208 Cme-Chr2:17409595 2.26E-40 dispersed
Cme01g00253 Cme-Chr1:1843010 Cme02g01208 Cme-Chr2:17409595 1.14E-128 dispersed
Cme01g00270 Cme-Chr1:2003894 Cme02g01208 Cme-Chr2:17409595 9.24E-95 dispersed
Cme01g01517 Cme-Chr1:19973538 Cme02g01208 Cme-Chr2:17409595 1.48E-78 dispersed
Cme02g01208 Cme-Chr2:17409595 Cme05g00100 Cme-Chr5:631104 6.60E-98 dispersed
Cme02g01208 Cme-Chr2:17409595 Cme02g01212 Cme-Chr2:17452736 8.06E-57 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01208 K00430 - csv:101214998 624.394