Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01280 ATGCCCTACATGCAAATGGAGCCAGAAGAGAAATATGTGATACCATCTTCTCAAATGGCGTTGAAATCCCACTATGGCTCAAATGATGGTGAGAAGACTAGTTTATGGAAAAGGAAAGGAAGGAGGAGAGCAAAAGGATCTTCCATGGAAGGATTGAAGCAAAAGGAGCTCGATCCAAACCTGGAGCTTCCCTCTTCTTCTTGCAAAAGCTTAACATTTCCAAGAAGGCCAGACTTTGGCCAGCTGGGGACTAAATGCTTGGTTAAAGCCAACCACTTCCTAGCCATAATACCTGAATCAGACATAAGCCATTATAATGTTAAGATAACCCCAGAAGTTACTTCTCGTAAAATGAAGAAGAATATACTGACCGAGTTGGTCAAACAATATAGAACTACAGAGCTGGGGATGCGACTGCCGGTTTATGATGGAGGAAGCAACCTGTACACAGCTGGATTGCTGCCTTTCATATCAAAAGAGTTCACTGTCATTTTGGGTAATGAAGAAGAGGGGACAGCTACTCCCAGGGAACGAGAATTTAAAGTGCAGATTAAGTTTGTAACTTTGGCTAGCATGCACCAGTTACGAGAATTACTCGCTGGCAAACAAGTTAATAACCCTCAAGAAGCTTTGACCATTATTGACATCGTCTTGAGGGAGCTCCATGCTCAAAGATATATATCAGTTGGGCGATCCTTTTACTCTCCTTGTATTAAGAAGCCTCAGCATGTTGGGGGTGGTTTGCAAGCATGGCGAGGCTTCTATCAAAGCATCCGGCCTACGCAAATGGGATTGTCTCTAAATATTGACATGTCATCCACTGCATTCATTGAAGCAATCCCGGTCATTGATTTTGTCGCTCAACTTTTAAACAAAGACGTGTACTCAAGAACATTGTCCGATGCTGATCGTATCAAGGTCAAAAAAGTACTTAGAGGTGTAAAAGTTGAAGTTACACATAGAGGAAACGTACGAAGGAAATATCGGATTTCAGGGCTAACATCACAGCCTACAAGAGAGCTAATTTTCCCTCTTGACGAGCAGATGAACATGAAGTCTGTTGTCGAGTACTTCCAAGAGATGTATGGGTATACCATTCAGTATACACATTTGCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGTGAATTATCTACCCATGGAGGCCTGTAAGATACTCAAAGGACAGAGATACACAAAAGGACTTAACGAAAAGCAAATCACTTCCTTGTTGAAGGTTTCATGTCAAAGACCCTCTGATCAGGAAATGGACATTTTACAGACAGTTCATGAGAATGCATATGAGGCAGATCCATACGCAAAAGAATTTCGAATCAGTATCGACAACAAGCTTACATCAGTTGAAGCACGAGTCCTTCCATCTCCATGGCTAAAATTTCATGATACTGGAAAGGAAAAGGAACATCAGCCTCAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTAATAGATGGAAGTGTTATCAGATACTGGGCTTGTATAAATTTCTCACGTAACGTTCAAGATAGCATAGCTCGTGGTTTCTGTCAACAGCTGGTCCAAATGTGCCAGATCTCTGGCATGGAATTTAACCCAGATCCTGCAATTCCTATATACTCAGCAAGACCAGATCAAGTGAAGAAGGCCTTAAAATTTGTATATGGTGCGGTTTATAACAAAAATGAAGAGAAAGAGTTAGATTTGCTGATAGCTATTCTTCCGGACAACAACGGCTCATTATATGGTACCAGTTTTCAATTAATTATAACGGTCACTCTGGTGTATGCCTACCTGCTTGGCACCAATAACTATGAAACGATAGATCATCTAATCCAGGGCCAAAATCTATTAGTGACTTCAAGTCAACATTTCTCATGTATTAAGAAGAGTATTGCTGTTGAAAATAAACTTGTAGGATCTTCAATGTCAGTGCCGGTAAAAAGCTTAGGTCTGGAACATCTGAAGCATTCAACATTACATGAGAACTTCAATTTCAAAGAGTTGAAGTTGAAAAAATTTCCTACATTTCAAATAATGTTACATAACCTTCCATCTTATCTAAGAGCAGTAAACTTCGTATTCAGGTGA 2088 40.33 MPYMQMEPEEKYVIPSSQMALKSHYGSNDGEKTSLWKRKGRRRAKGSSMEGLKQKELDPNLELPSSSCKSLTFPRRPDFGQLGTKCLVKANHFLAIIPESDISHYNVKITPEVTSRKMKKNILTELVKQYRTTELGMRLPVYDGGSNLYTAGLLPFISKEFTVILGNEEEGTATPREREFKVQIKFVTLASMHQLRELLAGKQVNNPQEALTIIDIVLRELHAQRYISVGRSFYSPCIKKPQHVGGGLQAWRGFYQSIRPTQMGLSLNIDMSSTAFIEAIPVIDFVAQLLNKDVYSRTLSDADRIKVKKVLRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVEYFQEMYGYTIQYTHLPCLQVGNQKKVNYLPMEACKILKGQRYTKGLNEKQITSLLKVSCQRPSDQEMDILQTVHENAYEADPYAKEFRISIDNKLTSVEARVLPSPWLKFHDTGKEKEHQPQVGQWNMMNKKVIDGSVIRYWACINFSRNVQDSIARGFCQQLVQMCQISGMEFNPDPAIPIYSARPDQVKKALKFVYGAVYNKNEEKELDLLIAILPDNNGSLYGTSFQLIITVTLVYAYLLGTNNYETIDHLIQGQNLLVTSSQHFSCIKKSIAVENKLVGSSMSVPVKSLGLEHLKHSTLHENFNFKELKLKKFPTFQIMLHNLPSYLRAVNFVFR 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18692973 18701507 - MELO3C025291.2.1 Cme02g01280 321169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01280 695 Pfam Mid domain of argonaute 477 553 IPR032473 -
Cme02g01280 695 SMART DUF1785_2 227 279 IPR014811 -
Cme02g01280 695 PANTHER PROTEIN ARGONAUTE 10 37 583 - -
Cme02g01280 695 Gene3D paz domain 273 398 - -
Cme02g01280 695 Pfam Argonaute linker 2 domain 423 466 IPR032472 -
Cme02g01280 695 SMART PAZ_2_a_3 284 416 IPR003100 GO:0005515
Cme02g01280 695 CDD PAZ_argonaute_like 279 393 - -
Cme02g01280 695 Pfam PAZ domain 284 410 IPR003100 GO:0005515
Cme02g01280 695 ProSiteProfiles PAZ domain profile. 280 394 IPR003100 GO:0005515
Cme02g01280 695 MobiDBLite consensus disorder prediction 23 52 - -
Cme02g01280 695 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 37 583 - -
Cme02g01280 695 Gene3D - 458 592 - -
Cme02g01280 695 SUPERFAMILY PAZ domain 274 433 IPR036085 GO:0005515
Cme02g01280 695 Pfam Argonaute linker 1 domain 228 278 IPR014811 -
Cme02g01280 695 Pfam N-terminal domain of argonaute 85 218 IPR032474 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01280 Cme-Chr2:18692973 Cme06g00567 Cme-Chr6:3593887 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01280 K11593 - csv:101213206 1139.79