Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01330 ATGAATCCCAAATCCCATTTCAACTCCCTTTTCCTCTTCTCCCTCCTCTTTCTCCACCTCTCCGCCGCCTATGGCACCCTCTCCGACGCTGAAGCTCTCTTCATCCGCCACCGCCAGCTTCTCTACTACAGAGACGAGTTCGGCGACCGTGGCGAACTAGTCACTGTCGACCCTTCTCTTGTCTTTGAAAATGACAGAATTAGAAATGCTTACATTGCACTTCAAGCTTGGAAACTAGCCATTTTGTCCGACCCTCTAAATCAAACCGCCAACTGGGTCGGATCTAATGTCTGTAACTACTTCGGTGTTTTCTGTGCTCCATCATTGGACAACCCCAAAATCCGTACCGTCGCCGGTATCGATCTCAACCACGGCGACATTGCTGGATACCTCCCTGAAGAGCTCGGTTTGCTTACTGATCTTGCATTGTTCCATATCAACTCTAACAGGTTCTGCGGTACTCTTCCCCACAGATTTGACCGTCTCAAGTTGCTTTATGAATTGGATCTCAGTAATAACCGCTTTGCCGGTAAGTTTCCCGATGTTGTTCTCAAGCTTCCGACGCTCAAGTTCTTGGATCTGAGGTTTAATGAATTCGAAGGGAGTGTACCTAGAGAGCTGTTTGATAAGGATTTGGACGCCATTTTTATTAACCATAACAGGTTTAGATTTGAGTTGCCGGATAATTTTGGGAACTCGCCGGTGTCGGTGATTGTTCTTGCGAACAATAAGTTTCATGGGTGTGTGCCCTCGAGCTTGGGGAATATGACGAGGTTGAATGAGATTATTATGATGAATAATGGGCTTAATTCTTGCTTACCGCCGGAAATTGGGGCATTGAAGAATTTGACGGTGTTTGATGTTAGTTCGAATGAGTTGGTGGGGCCGTTGCCGGAGACTTTTGGAGGGCTTGTGAGTTTGGAGCAACTTAATGTGGCGGATAATTTTCTCTCTGGGAAGATTCCGGAGAGTATTTGTGAGTTGCCTAAGCTTCAAAACTTTACGTTCTCGAATAACTTCTTCTCCGGTGAGCCACCGGCGTGTTTGAGAGTTCCGGATTTCAGTGATCGGAGGAATTGTTTGGCTGGACGGCCGGGGCAGCGGTCGACTGGGCAATGTAATGCGTTCTTGTCGAGACCTGTTGATTGTAATGCGTTTAAATGTGGTGGTTCATCTTCTGGTTCGCCTTCTACTCCATTTACACCGCCGGTGGTTTCGCCGTCTTCGCCTCCGTCACCGGCAGGTACGGTGTCTCCTCCATTGCCGTCTCATTCTCCCAATGCACCACCGGCGCCGCCACTCTCGCCTCATTTTCCTCCTCTGTCGCCACAATCACCACCGTCGCCGCCTTCTTCCCCATCTACGCCGTCGCAGCCGTCAGCACCGCCTTCTTCTCCATCTACCCCTTCAACTCCTTCCTCGCCGCCGCATTTTCCCTCTCCGACTGCACCGTCGCCTTCATCTGCTCCGCCGTCATTGCCGTCACCTTCATCACCCCCAAAAGATCATACTCCGCCGTCTGAGCCTTCGCCATCATCACCACCGCAAGACCATACTCCGCCAGGTCCACCTTCGTCCGTGCCTTCACCACCATTGCCGCCACAAGATCACAGTCCACCAGCATCCCCTTCGCCGTCCAAGCCCTCGCCTTCATCCCCGCCACAAGGTCACGCTCCTACGATTCCCCCTTCGCCTTTCGAACCATCACCGCCTCAAGGCAACAATCCGCCGGCGGAGCCTTCTCCTCCAGGAACATCAACACCACCATTCCCAGTTTATAGTCCGCCTCCGCCACCGCCACATTTCCCAGATTTTCCCTCGCCACCATCTACACAACCTCCGGTCTACTGCCCGCGATCCCCATATCCACCATCTCCTCCATCCTTCTCCCCAAACCCACCTCTCACTCACCCCAACTCCCCTCCGCCGCCATCACCGCCGCTACACGTTCATTCTCCCCCTCCCCCTCTTCATACAACCCCATCGCCGCTTCCTCCTCCTTGCATTCAACCTCCTCCACCAAATGTTCAATATCCACAACCGCCACCCTCTTCTTCACCAAACCCGTCATCTCCAATTCACTACAATACCCCACCACCGTCGGTCCATTACCAAGCTCCTCCCTCACCTTCACCACCCGTCCACATATATCCGCCGCCATCTCCAACGCCCCCTCCTCCAGTAGTTTACGAAAACCCGCCACCGCCAGTTGTCTACCAAAGCCCACCGCCGCCTCCAACTCCAGTATACGGAGGCCCACTGCCACCAATCTACGGAGTTCCGTACGCCTCTCCTCCTCCACCACCCTTCTATTAA 2316 53.02 MNPKSHFNSLFLFSLLFLHLSAAYGTLSDAEALFIRHRQLLYYRDEFGDRGELVTVDPSLVFENDRIRNAYIALQAWKLAILSDPLNQTANWVGSNVCNYFGVFCAPSLDNPKIRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINSNRFCGTLPHRFDRLKLLYELDLSNNRFAGKFPDVVLKLPTLKFLDLRFNEFEGSVPRELFDKDLDAIFINHNRFRFELPDNFGNSPVSVIVLANNKFHGCVPSSLGNMTRLNEIIMMNNGLNSCLPPEIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVADNFLSGKIPESICELPKLQNFTFSNNFFSGEPPACLRVPDFSDRRNCLAGRPGQRSTGQCNAFLSRPVDCNAFKCGGSSSGSPSTPFTPPVVSPSSPPSPAGTVSPPLPSHSPNAPPAPPLSPHFPPLSPQSPPSPPSSPSTPSQPSAPPSSPSTPSTPSSPPHFPSPTAPSPSSAPPSLPSPSSPPKDHTPPSEPSPSSPPQDHTPPGPPSSVPSPPLPPQDHSPPASPSPSKPSPSSPPQGHAPTIPPSPFEPSPPQGNNPPAEPSPPGTSTPPFPVYSPPPPPPHFPDFPSPPSTQPPVYCPRSPYPPSPPSFSPNPPLTHPNSPPPPSPPLHVHSPPPPLHTTPSPLPPPCIQPPPPNVQYPQPPPSSSPNPSSPIHYNTPPPSVHYQAPPSPSPPVHIYPPPSPTPPPPVVYENPPPPVVYQSPPPPPTPVYGGPLPPIYGVPYASPPPPPFY 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19221068 19223791 - MELO3C025324.2.1 Cme02g01330 321219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01330 771 MobiDBLite consensus disorder prediction 400 751 - -
Cme02g01330 771 SUPERFAMILY L domain-like 79 349 - -
Cme02g01330 771 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 6 540 - -
Cme02g01330 771 Gene3D Ribonuclease Inhibitor 70 231 IPR032675 -
Cme02g01330 771 Gene3D Ribonuclease Inhibitor 232 364 IPR032675 -
Cme02g01330 771 Pfam Leucine rich repeat 282 339 IPR001611 GO:0005515
Cme02g01330 771 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 6 540 - -
Cme02g01330 771 MobiDBLite consensus disorder prediction 390 751 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01330 Cme05g01968 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01330 Cme-Chr2:19221068 Cme06g00581 Cme-Chr6:3740501 1.06E-152 dispersed
Cme02g01330 Cme-Chr2:19221068 Cme05g01968 Cme-Chr5:28235872 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01330 - - csv:101220934 773.081