Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01337 TATAGACGTTGGACTTCATGTTCCACAGCTAGCGGTGCTAAATTTTCCCCTATAAAATCCCCTTTCTCTTTACCCTTTTTTCTCTCAAAAAAATGCAAACTCACCCTCTCCTCTAAAACTTCTTTTTTCCCGTTCACAATATTTAAAACCTCTCATCACTTCTTCCCTCCCCCCACCATGGACCATAATAATAGTCATACTCACTCCAATGGAAAAAAATCTGATTCTCATCTCAATATACCTCAAATCAAATTCACTAAACTCTTCATCAATGGACAGTTCGTTGATTCCGTTTCAGGAAAAACTTTTGATACCATAGATCCGAGGACTGAGGAAGTTATTGCCACGGTTGCCGCCGGTGACAAAGAAGATGTTGATCTCGCCGTGAAAGCCGCCCGTCAAGCCTTTGACCATGGCCCTTGGCCCCGCATGTCCGGCGCCGAGAGAGGGAGGATTATGACGAAACTAGCGGGATTGATAGATGAACACATGGAGGAACTGGCAGCGTTGGATACAATAGACGCTGGAAAATCGTTTCTGTTAGGAAAGATCGTGGATATACCGGGAGCTGCAAATACACTAAGGTACTACGCAGGTGCAGCGGACAAATTCCACGGGGAGGTGTTGAAAATGGCAAAACCGCTTCACGGTTACACGTTATTGGAACCCATTGGAGTGGTGGGACACATCATACCCTGGAATTTTCCGACCACCATGTTCTGGCTTAAAGTCAGCCCGGCCTTAGCCGCCGGTTGCACCATGATCGTCAAGCCCGCCGAACAAACGCCTCTCTCCGCACTCTTTTACGCACATCTTGCTAAACTGGCTGGTATACCCGATGGAGTACTCAACGTTGTGACTGGATATGGGTCGACAGCAGGTTCAAGCATTGCCAACCACATGGACATTGACAAGGTGAGCTTCACAGGATCAACCAAAGTGGGAAGATTGATAATGCAGGCAGCAAGTGCCAGTAATCTGAAGCAAGTGTCCTTAGAATTAGGAGGCAAATCACCACTTTTGATCTTTAATGATGCCGATCTCCAAAAAGCCACTGATCTAGCTCTCCTTGCCATCTTTTACAATAAGGGAGAAATTTGTGTGGCTGGCTCCCGAGTTTTAGTTCAAGAAGGAATCTATGACGAGTTTGTGAAAAAGATAACTGAAAAAGCAAAATCTTGGCTTGTAGGAGACCCTTTTGATCCAAAAGTTAAATATGGACCCCAGGTGGATAAAAAGCAAATGGATAAGATTTTGAAATACATAGAACACGGTAAAAGAGAAGGAGCGACATTGGTAACTGGGGGCAACCGTATAGGCAATGTGGGCTATTACATTGAACCCACAATCTTTACAGATGTCGAGGAAGACTCACTGATTGCTCAAGATGAAATATTCGGACCGGTTCTCTCCGTCATTAAATTCAAGACAATTGAAGATGGAATAAGGAGTGCAAACAATACCAAGTATGGGCTAGCAGCTGGGATAGTGACCAATAGTTTAGACATAGCAAACACGGTGTCAAGATCGATCCGAGCGGGTACGATTTGGATAAATTGTTACTTTGCTTTTGATCCAAGCTGCCCATTTGGAGGCTATAAGGAGAGTGGGTTTGGAAGGGACTCTGGAATGCACGCAATTAACAAGTATCTTCAAATTAAGTCTGTTGTGACTCCATTGGTTAACACTCCTTGGCTTTGA 1701 44.56 YRRWTSCSTASGAKFSPIKSPFSLPFFLSKKCKLTLSSKTSFFPFTIFKTSHHFFPPPTMDHNNSHTHSNGKKSDSHLNIPQIKFTKLFINGQFVDSVSGKTFDTIDPRTEEVIATVAAGDKEDVDLAVKAARQAFDHGPWPRMSGAERGRIMTKLAGLIDEHMEELAALDTIDAGKSFLLGKIVDIPGAANTLRYYAGAADKFHGEVLKMAKPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGSTAGSSIANHMDIDKVSFTGSTKVGRLIMQAASASNLKQVSLELGGKSPLLIFNDADLQKATDLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKITEKAKSWLVGDPFDPKVKYGPQVDKKQMDKILKYIEHGKREGATLVTGGNRIGNVGYYIEPTIFTDVEEDSLIAQDEIFGPVLSVIKFKTIEDGIRSANNTKYGLAAGIVTNSLDIANTVSRSIRAGTIWINCYFAFDPSCPFGGYKESGFGRDSGMHAINKYLQIKSVVTPLVNTPWL 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19320252 19323897 - MELO3C025328.2.1 Cme02g01337 321226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01337 566 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 90 554 IPR016162 GO:0016491
Cme02g01337 566 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 332 339 IPR029510 GO:0016491
Cme02g01337 566 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 336 525 IPR016163 GO:0016620
Cme02g01337 566 Pfam Aldehyde dehydrogenase family 94 556 IPR015590 GO:0016491
Cme02g01337 566 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 71 566 - -
Cme02g01337 566 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 71 566 - -
Cme02g01337 566 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 360 371 IPR016160 GO:0016491
Cme02g01337 566 SUPERFAMILY ALDH-like 80 562 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01337 Cme-Chr2:19320252 Cme02g01959 Cme-Chr2:25859064 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01337 K12355 - csv:101219029 978.393