Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01367 ATGTCGTCTCCGTCTCCAACCTCGCCGCCGGCGACTAACACCACCTCACCCCCACCTCCCACCACCACTGCACCACCTCCGGCAACCCCATCTCTCTCACCGCCTCCTCCCGACTCTGCCTCTCAGCCTCCTCCTGCTTCTTCATCTCCTCCGCCTTCTACTACTCCTTCCCCGCCACCTCCGGATACTTCCACTCCATCTCCGCCTACTTCTTCTCCTTCACCACCAACCCCACCTTCGACCTCTTCGCCTGCGCCTCCATCTACAAACTCGACTACTCCCCCGCAGCTGCCTAGTCCGACGCCGCCTTCGGGTTCTGGTACACCTGCGAGTCCCGGAGAAAATTTGACTCCGTCGTCTCCCTCACCGTCGTCGGGAGTTTCGGCTGGACTTGTGGCTGGAGTCGCCATTGCTGGAGTGGTGGTGGTTGTTGTGGCGTTGATTGTTATGTTTTTGTGTATGAGAAAGAAGAGAAGACGCGACGAGGAGGCTTACTACAGGCCGCCGCCGCCACCCCCGGCGTATAAAGATGGCCCATATGGTCAACAACAGCACCACTGGCAATCACATCCCCCGCCGCCGGCAGATCATATTGTCGGGGCAGTGCCGAAGCCATCTCCTCCACCAGCACCACGGCCACCGCTGTCACCTCCGATTATAAACAGCAGTGGGGGCTCTGGATCTAATTATTCAGGGTCTGAAAATTCGCTTGCTCCTGCTTCATCTTCTATTCCCTTAGGCTTTTCACAAAGCAGTTTTACTTATGAAGAGTTAGCAATGGCCACAGATGGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGGGTTCTTCCAAATGGAAAGGAAGTGGCAGTGAAGCAACTTAAAGCTGGAAGTGGACAGGGAGAACGTGAATTTCAAGCTGAAGTGGAAATAATCAGCCGTGTTCATCATAGACATCTTGTTTCCTTAGTTGGATATTGCATTACCGGCTCCAAACGATTGCTGGTTTATGAATTTGTTCCTAACAACACATTGGAGTTTCACTTGCATGGGAAAGGACGACCCACCATGGATTGGCCAACGAGATTGAAAATTGCTCTCGGATCTGCCAAGGGATTGGCTTACCTTCACGAGGATTGTAATCCTAAGATCATTCATCGCGACATCAAAGCTGCAAATATACTTTTGGATTTGAAATTTGAAGCAAAGGTTGCTGATTTTGGGCTTGCTAAGTTGTCTTCTGATGTTAATACTCATGTTTCAACCCGAGTCATGGGAACTTTTGGATACCTTGCTCCAGAATACGCTTCAAGTGGGAAACTCACTGAGAAATCAGATGTCTTCTCCTTTGGAGTGATGCTTTTGGAGATGATTACTGGACGTAGACCTGTAGATACAACTCAATCATTCATGGACGATGGATTGCTCGATTGGGCAAGGCCATTACTACTTCGGGCCACGGAAGATGGGCACTACGATGGTTTAGTAGATCCAAAGCTGAGAGATAACTACGACCACAATGAAATGGCTCGCATGGTTGCTTGTGCAGCTGCCTGTGTGCGCCATTCAGCGAGGCGCCGACCACGGATGAGTCAGGTGGTTCATGCTCTTGAAGGTGAATCCTCACTTTCTGATCTTAACGAAGGGATACGGCCTGGACATAGCTCTGTCTACAGTTCTTATGGAAGCTCTGACTACGACACAGCTCAGTACAATGAGGACCTGAAAAAGTTCAGGAAGATGGCGTTGGCAAGTCAGGAGTACGGCAGTGAGTTCAGCGAGCAAACGAGTGAGTATGGTTTGTATCCATCTGGGTCGAGTGGCGATGGCCAAACAACCAGGGAAATGGAGATGAGAATGACGGCGAAGAAAGAAAGTGGAGGTTTTAGTGGAAGCTCATGGGGAGAGGAAGTAAAGAAGCACTGA 1929 50.49 MSSPSPTSPPATNTTSPPPPTTTAPPPATPSLSPPPPDSASQPPPASSSPPPSTTPSPPPPDTSTPSPPTSSPSPPTPPSTSSPAPPSTNSTTPPQLPSPTPPSGSGTPASPGENLTPSSPSPSSGVSAGLVAGVAIAGVVVVVVALIVMFLCMRKKRRRDEEAYYRPPPPPPAYKDGPYGQQQHHWQSHPPPPADHIVGAVPKPSPPPAPRPPLSPPIINSSGGSGSNYSGSENSLAPASSSIPLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSKRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEMITGRRPVDTTQSFMDDGLLDWARPLLLRATEDGHYDGLVDPKLRDNYDHNEMARMVACAAACVRHSARRRPRMSQVVHALEGESSLSDLNEGIRPGHSSVYSSYGSSDYDTAQYNEDLKKFRKMALASQEYGSEFSEQTSEYGLYPSGSSGDGQTTREMEMRMTAKKESGGFSGSSWGEEVKKH 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19773821 19777004 + MELO3C025348.2.1 Cme02g01367 321256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01367 642 MobiDBLite consensus disorder prediction 1 107 - -
Cme02g01367 642 MobiDBLite consensus disorder prediction 595 615 - -
Cme02g01367 642 Pfam Protein tyrosine and serine/threonine kinase 269 538 IPR001245 GO:0004672|GO:0006468
Cme02g01367 642 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 11 620 - -
Cme02g01367 642 MobiDBLite consensus disorder prediction 196 218 - -
Cme02g01367 642 MobiDBLite consensus disorder prediction 595 642 - -
Cme02g01367 642 PRINTS Proline rich extensin signature 3 19 - -
Cme02g01367 642 PRINTS Proline rich extensin signature 23 35 - -
Cme02g01367 642 PRINTS Proline rich extensin signature 40 61 - -
Cme02g01367 642 SUPERFAMILY Protein kinase-like (PK-like) 240 538 IPR011009 -
Cme02g01367 642 MobiDBLite consensus disorder prediction 219 236 - -
Cme02g01367 642 ProSiteProfiles Protein kinase domain profile. 265 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01367 642 MobiDBLite consensus disorder prediction 160 236 - -
Cme02g01367 642 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 11 620 - -
Cme02g01367 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Cme02g01367 642 MobiDBLite consensus disorder prediction 108 127 - -
Cme02g01367 642 Gene3D Phosphorylase Kinase; domain 1 224 340 - -
Cme02g01367 642 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Cme02g01367 642 Gene3D Transferase(Phosphotransferase) domain 1 341 550 - -
Cme02g01367 642 SMART serkin_6 265 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01367 642 MobiDBLite consensus disorder prediction 1 127 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01367 Cme05g01976 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01367 Cme-Chr2:19773821 Cme07g01715 Cme-Chr7:22658448 0 dispersed
Cme06g00940 Cme-Chr6:6604592 Cme02g01367 Cme-Chr2:19773821 1.90E-16 dispersed
Cme11g02528 Cme-Chr11:31739862 Cme02g01367 Cme-Chr2:19773821 1.51E-17 dispersed
Cme04g01614 Cme-Chr4:23352235 Cme02g01367 Cme-Chr2:19773821 4.25E-58 transposed
Cme05g00236 Cme-Chr5:1703164 Cme02g01367 Cme-Chr2:19773821 3.44E-32 transposed
Cme05g01388 Cme-Chr5:23092773 Cme02g01367 Cme-Chr2:19773821 1.29E-73 transposed
Cme06g00943 Cme-Chr6:6637827 Cme02g01367 Cme-Chr2:19773821 4.08E-86 transposed
Cme07g02042 Cme-Chr7:25371704 Cme02g01367 Cme-Chr2:19773821 5.40E-95 transposed
Cme09g01120 Cme-Chr9:15884269 Cme02g01367 Cme-Chr2:19773821 2.19E-50 transposed
Cme10g00700 Cme-Chr10:4401121 Cme02g01367 Cme-Chr2:19773821 2.18E-49 transposed
Cme12g00308 Cme-Chr12:4007837 Cme02g01367 Cme-Chr2:19773821 6.05E-76 transposed
Cme12g01545 Cme-Chr12:22912626 Cme02g01367 Cme-Chr2:19773821 2.77E-63 transposed
Cme02g01367 Cme-Chr2:19773821 Cme05g01976 Cme-Chr5:28312913 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64692 PF07714 PK_Tyr_Ser-Thr 3.00E-46 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01367 - - csv:101222748 870.537