Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01435 ATGGACACAACCGATTCAATCACTGCTTTCTCTCATCTTCTTCAACCTCCAGATTTCTCTCACTATGTTGAAATTGATCCCACTGGCAGATATGGAAGATATAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTTTACAGAGCATTTGATGAGTATGAAGGGATTGAAGTTGCTTGGAATCAGGTCAAACTCTGTAACTTCCTTCAATGTCCTGAAGATCTTGAGAGGCTATACTCTGAGATTCATCTCTTAAAAACATTGAAACATAAAAACATAATGAAATTCTATACCTCTTGGGTCGATACTGCAAATAAGAACATCAACTTTGTAACTGAAATGTTCACTTCTGGGACTCTGAGGCAGTATAGGCTAAAGCATAGGAGAGCTAACATTAGGGCAGTGAAGCGATGGTGTAGACAAATTTTGAGGGGTCTTCATTATCTCCATAGCCAAGACCCCCCTGTGATCCACAGAGATCTCAAGTGTGACAACATTTTTGTTAATGGTAACCAGGGAGAAATTAAAATTGGAGACCTTGGTCTTGCTGCTATCCTCCAGAAATCACATGCTGATCATTGTGTTGGGACACCAGAGTTCATGGCTCCTGAAGTATATGAGGAGGCATATAATGAATTGGTAGACATTTATTCTTTTGGGATGTGTGTTTTGGAGATGGTTACGTTTGAATATCCATATAGTGAATGTAATCATCCTGTTCAAATCTATAAGAAAGTAATTTCTGGGAAAAAACCAGATGCCTTGTATAAAGTGAAGGATCCAAGCATGCGACAATTCGTTGAGAAATGCTTGGCACCAGTCTCTTGTAGACTTTCAGCAAGGGAGCTTTTGAGTGACCCTTTTCTTGAAATTGATATTTGTGAAAGCAAGTTGAAAATTTCAGATTCTCGGAGAGAACTGGACGATTTTGCTTCCACTATAGTGCGGCCTTTTCTTGAACGAGAAAAAAGATTTAGCTCAATTAGTTACAGTTTGGAGGCCTCAGATGAATGGAGGTACCGTTCAGTCCAGAAGGAACGTGATGGGATTGAACTTTTTGAGGACAATGATAATGACCAATTGGAAAATCTTGATAAAAATATTAAGGGGAAAATACGTGAAGATGGCAGCATTGTTTTAAGACTTAGGATTACGGATAAAGAAGGGCTTATTCGGAACATATATTTCCCATTTGACACCAAGAATGATACAGCATTAACAGTAGCCACCGAAATGATTGCAGAACTTGATATTACTGACCAAGATGTGATCAAGATAGCTGAAAAAATTGATGGGGAAATTTCTTCCTTGGTACCCGAGTGGAAGCCAGGGCCTGGCATAGACGAAACACCTCGCATCTCTTACGATGGTGGCTCTCAAAGCTACAACGCTTCTAATCAACCATCTGATAATATTTTGATAGAGAATAAAGGAAATGGAATCAAACTTTATCAGATTTTGAACTTAAGCACAGATGGGCATGCTTTGGCACATAAACATTTCGAGCAAGAGCAGTTCTCGCTCAAAGCAGATCGGCCTACACAACCTGTGGTAGGGAGCATACCAAATGTGTCAAGCCAGCACTATCAGCCAGATTCTGTCCTCCCTGAAAACCAAGCTCTTAGTTCTCGTAGTTTTAGGCAAAGACATTATGATGATAATTACAAGAAAACTGACCAATCACTCGCTGTTGGGTATAAAGAAAAACTACCAGATAAGAAAGCCACTGTCATTGACACTTCACAAAGAAGCTTATTGGGTTCCCGATCACTGTCCAGGGTTTCATCCTATTGCGAAGATAAATTTTCCTCTCAAATCCATTGGGAAATTAGATGGCTGTGGAATTGA 1848 39.83 MDTTDSITAFSHLLQPPDFSHYVEIDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLCNFLQCPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANKNINFVTEMFTSGTLRQYRLKHRRANIRAVKRWCRQILRGLHYLHSQDPPVIHRDLKCDNIFVNGNQGEIKIGDLGLAAILQKSHADHCVGTPEFMAPEVYEEAYNELVDIYSFGMCVLEMVTFEYPYSECNHPVQIYKKVISGKKPDALYKVKDPSMRQFVEKCLAPVSCRLSARELLSDPFLEIDICESKLKISDSRRELDDFASTIVRPFLEREKRFSSISYSLEASDEWRYRSVQKERDGIELFEDNDNDQLENLDKNIKGKIREDGSIVLRLRITDKEGLIRNIYFPFDTKNDTALTVATEMIAELDITDQDVIKIAEKIDGEISSLVPEWKPGPGIDETPRISYDGGSQSYNASNQPSDNILIENKGNGIKLYQILNLSTDGHALAHKHFEQEQFSLKADRPTQPVVGSIPNVSSQHYQPDSVLPENQALSSRSFRQRHYDDNYKKTDQSLAVGYKEKLPDKKATVIDTSQRSLLGSRSLSRVSSYCEDKFSSQIHWEIRWLWN 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20933388 20936606 + MELO3C024678.2.1 Cme02g01435 321324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01435 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Cme02g01435 615 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 615 - -
Cme02g01435 615 Gene3D - 376 442 - -
Cme02g01435 615 Gene3D Transferase(Phosphotransferase) domain 1 115 294 - -
Cme02g01435 615 MobiDBLite consensus disorder prediction 509 534 - -
Cme02g01435 615 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 14 615 - -
Cme02g01435 615 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 432 IPR024678 GO:0004674|GO:0005524
Cme02g01435 615 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01435 615 Gene3D Phosphorylase Kinase; domain 1 18 113 - -
Cme02g01435 615 MobiDBLite consensus disorder prediction 518 534 - -
Cme02g01435 615 CDD STKc_WNK 30 289 - -
Cme02g01435 615 SMART serkin_6 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01435 615 ProSiteProfiles Protein kinase domain profile. 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01435 615 SUPERFAMILY Protein kinase-like (PK-like) 35 290 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01435 Cme-Chr2:20933388 Cme05g01762 Cme-Chr5:26633620 0 dispersed
Cme02g01435 Cme-Chr2:20933388 Cme11g01446 Cme-Chr11:21379247 3.04E-165 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64696 PF00069 Pkinase 1.60E-49 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01435 K08867 - csv:101222641 1167.53