Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g01495 | ATGAGGATTATGATAAAAGGTGGTGTGTGGAAGAACACGGAAGATGAGATCCTTAAAGCTGCGGTTATGAAATATGGCAAAAACCAGTGGGCTCGAATTTCCTCGCTTCTTGTTAGGAAATCTGCTAAGCAGTGCAAGGCTCGATGGTATGAGTGGCTTGACCCCTCCATTAAAAAGACTGAGTGGACAAGAGAGGAGGATGAGAAACTACTCCATCTTGCTAAGCTAATGCCAACCCAGTGGAGAACTATTGCACCAATTGTTGGACGTACTCCATCCCAGTGTCTCGAGCGGTATGAGAAGCTTCTTGATGCTGCTTGTGTTAAGGATGACAATTACGAACCAGGAGATGATCCAAGAAAATTGCGCCCTGGAGAAATTGATCCAAACCCAGAGTCAAAGCCTGCACGTCCCGATCCTGTTGACATGGACGAAGATGAAAAGGAAATGCTTTCTGAAGCACGAGCAAGGTTAGCAAATACTAGGGGAAAGAAGGCAAAAAGGAAAGCCCGAGAGAAACAACTTGAAGAGGCCAGAAGGCTTGCTTCGCTGCAAAAAAGAAGAGAGCTAAAAGCTGCAGGGATTGATACTCGACAAAGGAAGAGAAAGAGAAAAGGAATAGATTACAATGCTGAAATTCCTTTTGAGAAAAAACCTCCTCCAGGATTTTTTGATGTTAGTGAGGAAGATAGACCAGTGGAGCAGCCCAAGTTTCCAACAACGATTGAAGAACTTGAAGGAAAAAGAAGGATCGATGTAGAAGCCCAATTAAGAAAGCAAGATATTGCAAAGAATAAAATTGCTCAGAGACAAGATGCTCCATCAGCTGTGCTGCAAGCAAATAAGCTGAATGACCCAGAAATGGTGCGGAAAAGATCTAAACTTATGCTGCCTGCACCTCAAATTTCAGATCATGAATTGGAGGAAATTGCAAAGATGGGATATGCAAGTGATCTTCTAGCTGGTAATGAAGAGCTTGCAGGGGGAAGTGGTGCTACACGAGCTTTGCTTGCAAATTATGCACAGACACCACGGCAAGGAATGACACCTTTTCGAACTCCCCAGAGGACGCCGGCTGGGAAGGGCGATGCCATAATGATGGAGGCAGAAAACCTTGCTAGGCTGAGAGAATCTCAGACTCCATTGTTGGGAGGAGAGAATCCAGAGCTGCATCCTTCAGATTTTTCAGGAGTCACCCCAAGGAAAAAGGAGATTCAAACACCAAATCCTATGTTAACACCATCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGGAGTGGCATGACACCAGCTAGGGATGCTTACTCATTTGGCATGACTCCAAAAGGTACACCTATTAGAGATGAGTTACGTATCAATGAAGATATGGATGCAGATGATAGTGCAAAACTGGAGTCTCAAAGACAAGCTGATTTGAGAAGGAATCTTAGCCTAGGATTAGGAAATCTTCCACAGCCTAAGAATGAGTACCAGGTAGTTATGCAACCAATTCCAGAAGACAAAGAAGAACCTGAGGAGATGATTGAAGAGGACATGTCTGATAGGATTGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCAGCAGGCTTTACTTAGGAAAAGATCAAAAGTGCTACAGAGAGAGCTTCCTCGGCCTCCTACTGCTTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGATAAGAGTTCATTTGTTCCACCTACCCCTATTGAGCAAGCTGATGAAATGATGAGAAAGGAACTTCTTGCTTTGTTAGAGCATGATAACGCAAAGTATCCAATTGATGAAAAGGTCAACAAGGAGAAAAAGAAGGGTTCCAAGCGCACTGGAAATGGACCAACTGCTGTCATCCCCACAATAGATGACTTTGAAGAAACTGAGATGGAGGAGGCCGATTATTTGATAAAGGAAGAGGCTCGGTATCTGTGTGCTGCAATGGGGCATGAAAATGAATCCTTAGATGAGTTTGTGGAAGCGCACAGAACCTGCTTGAATGATCTTATGTACTTCCCCACTAGAAATGCTTATGGACTTTCGAGTGTTGCTGGATATCATGAGAAATTAGCCGCCTTGCAGGATGAATTTGAGTATGTTAAAAAGAAAATGGATGATGATACTGAGAAGGCTGTCCGGTTGGAGAAGAAAGTTAAAGTTCTCACACATGGCTATGAGACACGGGCAAAACAAAGCCTTTGGCCACAAATTGAAGCAACTTTCAAGCAGATAGACACTGCAGCTACAGAGCTGGAGTGCTTTGAAGCTCTTCAAAAGCAAGAGCTATCAGCTGCTTCACACCGGATTAGTGGTATCTGGGAGGAGGTTCAAAAACAAAAAGAGCTGGAGAGAACACTTCAGTTACGTTATGGAAACCTTTTGGAGGACTTGGAAAAGATGGAGAAAATCATGGTTGATCGCAAGGCACAGGCACAAAAGGAAGAAGAGATCGCTGCAGAGAGTCACGCTCTTCAGTTGGCTGAGGTTGAGCCTAACCAAAACGTTGGAGAAAATGCTGATAGTTCCGAAGCCATGTCTGCATCAGTAGCGGCAGTTGATCGTGAAAATTCAGTGCCTGTTCCCACCTCCATTGAATTAATGGGTGAACAACTAAACTCATCTGTGGGACATGAAAACAAAACTAACAAGGCCATGGATATCCACACTGAAAAGGAAAGTGTAGCAGTGGATTTGGATATTGGTTTGTCTGATAACAAACTACCTTCTGCAGCGGGAGATGCATCACTGCCTGACAATGGCTTTGAAGAGTCTGATAAAAGTCAAACCATTGATGTTCCTTCTCAAGAACTCTTGGGCCCTGATGCAAATGGCATGTCAGATTCGGTTGATGGTGCAACTATTGAAAATGATAAATGTAGTACTGATATTGTCGAGGAAGTAAAAGATGTCGAAACTCAGCAGCCTGTGATTGAAACTGAAAATAACTCAGATATGCATTCGATTGATCTGGATGCAGCTGCACCTGCATCTTCTTATGAGGATGGCCCTGTGAATGATGGCAACACAGGAGAAATGGAATCAAATGTCTAG | 3057 | 43.8 | MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKKPPPGFFDVSEEDRPVEQPKFPTTIEELEGKRRIDVEAQLRKQDIAKNKIAQRQDAPSAVLQANKLNDPEMVRKRSKLMLPAPQISDHELEEIAKMGYASDLLAGNEELAGGSGATRALLANYAQTPRQGMTPFRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPRKKEIQTPNPMLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDADDSAKLESQRQADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEEPEEMIEEDMSDRIARERAEEEARQQALLRKRSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMMRKELLALLEHDNAKYPIDEKVNKEKKKGSKRTGNGPTAVIPTIDDFEETEMEEADYLIKEEARYLCAAMGHENESLDEFVEAHRTCLNDLMYFPTRNAYGLSSVAGYHEKLAALQDEFEYVKKKMDDDTEKAVRLEKKVKVLTHGYETRAKQSLWPQIEATFKQIDTAATELECFEALQKQELSAASHRISGIWEEVQKQKELERTLQLRYGNLLEDLEKMEKIMVDRKAQAQKEEEIAAESHALQLAEVEPNQNVGENADSSEAMSASVAAVDRENSVPVPTSIELMGEQLNSSVGHENKTNKAMDIHTEKESVAVDLDIGLSDNKLPSAAGDASLPDNGFEESDKSQTIDVPSQELLGPDANGMSDSVDGATIENDKCSTDIVEEVKDVETQQPVIETENNSDMHSIDLDAAAPASSYEDGPVNDGNTGEMESNV | 1018 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 21983990 | 21999604 | + | MELO3C017522.2.1 | Cme02g01495 | 321384 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g01495 | 1018 | Gene3D | - | 5 | 58 | - | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
Cme02g01495 | 1018 | Pfam | pre-mRNA splicing factor component | 407 | 658 | IPR021786 | - | |
Cme02g01495 | 1018 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 2 | 57 | IPR017930 | - | |
Cme02g01495 | 1018 | Coils | Coil | 796 | 816 | - | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 600 | 621 | - | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 911 | 1018 | - | - | |
Cme02g01495 | 1018 | Coils | Coil | 167 | 187 | - | - | |
Cme02g01495 | 1018 | SMART | sant | 58 | 105 | IPR001005 | - | |
Cme02g01495 | 1018 | SMART | sant | 6 | 55 | IPR001005 | - | |
Cme02g01495 | 1018 | Gene3D | - | 59 | 114 | - | - | |
Cme02g01495 | 1018 | SUPERFAMILY | Homeodomain-like | 33 | 106 | IPR009057 | - | |
Cme02g01495 | 1018 | PANTHER | - | 1 | 901 | - | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 1004 | 1018 | - | - | |
Cme02g01495 | 1018 | ProSiteProfiles | Myb-like domain profile. | 2 | 53 | IPR001005 | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 400 | 414 | - | - | |
Cme02g01495 | 1018 | CDD | SANT | 10 | 53 | IPR001005 | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 961 | 975 | - | - | |
Cme02g01495 | 1018 | ProSiteProfiles | Myb-like domain profile. | 54 | 103 | IPR001005 | - | |
Cme02g01495 | 1018 | CDD | SANT_CDC5_II | 55 | 106 | - | - | |
Cme02g01495 | 1018 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 58 | 107 | IPR017930 | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 382 | 421 | - | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 212 | 234 | - | - | |
Cme02g01495 | 1018 | Pfam | Myb-like DNA-binding domain | 10 | 70 | - | - | |
Cme02g01495 | 1018 | MobiDBLite | consensus disorder prediction | 110 | 150 | - | - | |
Cme02g01495 | 1018 | PANTHER | CELL DIVISION CYCLE 5-LIKE PROTEIN | 1 | 901 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g01495 | Cme-Chr2:21983990 | Cme04g02621 | Cme-Chr4:32085347 | 1.35E-10 | dispersed | |
Cme02g01495 | Cme-Chr2:21983990 | Cme03g01729 | Cme-Chr3:25877481 | 2.53E-11 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
40907 | PF11831 | Myb_Cef | 1.90E-57 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g01495 | K12860 | - | csv:101205030 | 1845.86 |