Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01542 ATGCAGAGGCAGACAAGGTATATGGAGAGGACAAACTCCATGAGGGAGAAAAGGGGCTTGGAGGGTGGAGAAGATGAGCTGCCAGAGCGAAAGCGACCAGCTTTAGCTAGTGTGATTGTAGAAGCCCTGAAGGTGGATAGTTTACAAAAGCTGTGCTCGTCATTGGAACCAATACTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTTCTGGAAGGTCTTCCCCTAAAAGGATCGAAGGTCCTGATGGAAGAAACTTGCAACTTCACTTTAGGTCTAGATTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGTGAACAGGGTGCAGCAATTCACGTCGTTCTGGTTGATGCCAACACAGGCCATGTAGTAACGTCTGGACAGGAGGCCTTGACTAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACGGAGGAAGAATTTGAAAGTCATGTCGTTAAAGAGCGTGAAGGAAAGAGGCCTCTATTGACTGGTGACCTGCAGGTTACCCTCAAGGAAGGCATTGGAACACTAGGGGATTTGACCTTCACTGATAATTCAAGTTGGATTAGGAGCAGAAAGTTCCGACTTGGGTTAAAGGTGGCTTCAGGATTTTGTGAAGGTGTACGTATTCGTGAAGCAAAAACTGAAGCTTTTACAGTTAAAGATCACAGAGGAGAATTGTATAAAAAACATTACCCACCTGCATTAAACGATGAGGTGTGGAGATTGGAGAAGATTGGAAAGGATGGTTCCTTTCACAAGCGTCTTAACAAAAATGGAATATTCTCTGTTGAAGACTTTCTCCGAATGGTGGTTCGAGATTCCCAAAAGTTACGGAGTATCCTTGGTAGTGGTATGTCAAATAAAATGTGGGAGGCTCTCCTAGAACATGCTAAGACCTGTGTCCTGAGTGGGAAGCTGTATATTTATTATCCAGAAGAAACGAGAAATGTTGGTGTTGTTTTTAACAATATCTATGAGCTCAATGGACTGATAACAGGGGAACAATACTTTTCTGCTGATTCTCTGTCTGATAGCCAGAAGGTTTATGTAGATACGTTAGTGAATAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGCAAGTCACTTTTGAGCTCTAAGCAGCCTAAGAAGTCAAATGCATCCCGAAATGACTTTCAAGGTGGTCATCTTGATCTTTCTAATACTCTAGATCACGGATCATTGGCCCGCATGCCAGTGTCAGTTCAACCTCAACAGCCTGTTGTGGATCCAGGACTCTCAGTTGCAGGGTATAATGATAGTACAGCCACAAGATATTCAACTCAGCCTCAGTTTGTGAATTCAACTTCTCGGCCACAGTTTGACAATTCTCCATATACTTCTAATGAATTGGTGGGCAATTCTAACCAAGTTCATGTTGCGAGAAATGACAATAGTTCTTTTGGTTTGGCTCTTGGTCCTCCACAAGCATCATCTTCAGGGTTTCAGGCACTCGGTTCTTCAATGCAGGAATCTAATCTGAATCCATTTGATTGGTCTAACAATAGGGACAAGGGAGTTGACGACTTCTTTTCTGAGGATGAGATTCGTATGAGAAGTCATGAAATGCTTGAAAATGAAGATATGCAACAATTGTTGCGGATGTTTAGCATGGGAGGGCATGCATCTGTTAACGTCCATGATGAGGGTTTTTCATTCCCATCATTCATGCCTTCACCAATGCCAAGTTTTGACGACCGTAACCGATCTGGTAAAGCTGTGGTGGGTTGGCTGAAGATCAAAGCTGCAATGAGGTGGGGATTCTTCATCAGGAAGAAAGCAGCTGAGAGACGTGCACAGATTGTCGAGTTGGACGATGAATAG 1914 43.31 MQRQTRYMERTNSMREKRGLEGGEDELPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKIGPARISGRSSPKRIEGPDGRNLQLHFRSRLSLPLFTGGKVEGEQGAAIHVVLVDANTGHVVTSGQEALTKLDIVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGDLQVTLKEGIGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKNGIFSVEDFLRMVVRDSQKLRSILGSGMSNKMWEALLEHAKTCVLSGKLYIYYPEETRNVGVVFNNIYELNGLITGEQYFSADSLSDSQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKQPKKSNASRNDFQGGHLDLSNTLDHGSLARMPVSVQPQQPVVDPGLSVAGYNDSTATRYSTQPQFVNSTSRPQFDNSPYTSNELVGNSNQVHVARNDNSSFGLALGPPQASSSGFQALGSSMQESNLNPFDWSNNRDKGVDDFFSEDEIRMRSHEMLENEDMQQLLRMFSMGGHASVNVHDEGFSFPSFMPSPMPSFDDRNRSGKAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELDDE 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22492672 22499222 + MELO3C017483.2.1 Cme02g01542 321431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01542 637 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Cme02g01542 637 MobiDBLite consensus disorder prediction 9 28 - -
Cme02g01542 637 PANTHER OS02G0177800 PROTEIN 7 635 IPR012416 GO:0005516
Cme02g01542 637 MobiDBLite consensus disorder prediction 393 413 - -
Cme02g01542 637 PANTHER CALMODULIN-BINDING PROTEIN 60 B 7 635 - -
Cme02g01542 637 MobiDBLite consensus disorder prediction 1 28 - -
Cme02g01542 637 Pfam Calmodulin binding protein central domain 255 321 IPR046830 -
Cme02g01542 637 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00056 Cme-Chr2:508369 Cme02g01542 Cme-Chr2:22492672 1.74E-49 dispersed
Cme02g01542 Cme-Chr2:22492672 Cme02g01942 Cme-Chr2:25746744 7.51E-111 dispersed
Cme02g01542 Cme-Chr2:22492672 Cme05g01572 Cme-Chr5:24967705 1.12E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01542 - - cmo:103494282 1232.62