Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01552 ATGGCAGCCCTCCAATTTCATGGCATGGAAGCCGAAATCTCCGCAGCGTTTCTGGTAGATCGAATCATTGACCTTCATCAAAGCATCTTGAAGCTTGAAACCTTAAGGCCATGCAAGAAAGTGAACAACCTCTTCACCAACCTAGTGAACTTATGCATTTTGCCTTGTTCAATAGATGTCTCCACGTTGCCACCAAATTTACAAGCCATTCGTGAGAGCCTCATAATTCTCTGTGGCCAAGCTGAAGGCTTACTCGAGTTAGAATTCTCAACTTTGCTAAGCAAAATCCCAAAGCCTCTCAACAACCTCACTTTATTTCCATATTACCAAAACTACGTCAAATTAGCCAACCTTGAAAACAAAATTCTAAATGACAATGGAATCGTCAATCCTAAGAAGGTAGCTTTTGTGGGGTCAGGTCCTTTGCCTCTAACTTCAATTATTATGGCCATGCAACACATGAAGGGCACATATTTTGATAACTACGACGTAGACAGTGTAGCGAATGATGTAGCGAGAAAGATCGTGGGGTCGGATGCTGAGCTGGAGGGGAGAATGAAGTTTTGCTCTAGTGATATTGTTGAGGTAAAAGAAGAGCTTGGAGGATATGATTGTGTGTTTTTGGCTGCTCTCGTGGGGATGAATAAGGAAGAAAAAGTGAAGATTGTAAGGCATTTAAGGAAATATATGAAAGAAGGTGGGATTTTGTTGGTGAGAAGTGCTCAAGGAGGGAGAGCGTTTTTGTATCCTGTGGTTGAAGTTGGAGATTTGGTTGGGTTCGAGATTCTCTCTATTTTTCATCCAACTGATGATGTTGTCAATTCAGTTATCTTAGCTCGTAAGCAAACTAGTTAG 855 41.52 MAALQFHGMEAEISAAFLVDRIIDLHQSILKLETLRPCKKVNNLFTNLVNLCILPCSIDVSTLPPNLQAIRESLIILCGQAEGLLELEFSTLLSKIPKPLNNLTLFPYYQNYVKLANLENKILNDNGIVNPKKVAFVGSGPLPLTSIIMAMQHMKGTYFDNYDVDSVANDVARKIVGSDAELEGRMKFCSSDIVEVKEELGGYDCVFLAALVGMNKEEKVKIVRHLRKYMKEGGILLVRSAQGGRAFLYPVVEVGDLVGFEILSIFHPTDDVVNSVILARKQTS 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22558673 22559527 - MELO3C017475.2.1 Cme02g01552 321441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01552 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Cme02g01552 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 240 IPR029063 -
Cme02g01552 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Cme02g01552 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Cme02g01552 284 Gene3D Vaccinia Virus protein VP39 14 283 IPR029063 -
Cme02g01552 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Cme02g01552 284 CDD AdoMet_MTases 163 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01552 Cme-Chr2:22558673 Cme05g01548 Cme-Chr5:24818750 2.10E-91 dispersed
Cme02g01552 Cme-Chr2:22558673 Cme02g00033 Cme-Chr2:324312 1.07E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01552 K05953 - csv:101209464 529.635