Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01554 ATGGCTGCCGCCGACGGTTCCTCACCCGAATTCCTATTCCGTTCAAAACTCCCGGAAATTCCCATCTCCACCCACCTCCCATTGCACACATATTGTTTCGAAAATATCTCCGAATTCAAACAACGTCCATGTCTAATCAACGCCGCCACCGGCCACACCTACACCTATGGCGAAGTTCAAGCAACATCCCGCCGAGTGGCCGCAGGTCTCCACAAGTTAGGTATCGGAAAAGGTGACGTCATCATGCTCCTCCTCCAAAACACCCCAGAGTTCGTTTTAGCTTTCCTCGCAGCCTCCTACCTCGGCGCCGCCGCCACCATGGCCAACCCATTCTTCATGCCGGCGGAAATTGCAAAACAAGCTGTGTCATCTGGGGCCAAGGTGATCATAACCCAATCTGCGTTTGCAGAAAAAGTGAAAAAACTATCTCAGGGAAGTGAGATGATCATTAAAGTAATATTCATCGACGACGACGATCCTCCGACGAAGGGAGGATATAAATTTTCGTCGTTGATTGATGACGTGGCAAAAGAGGAGGAGTTGGAAATGGGAGATGTGAAAATCAGTCCAGACGACGTCGTTGCGTTGCCTTATTCGTCGGGAACCACTGGTCTTCCAAAAGGAGTTATGCTGACTCATAAAGGATCAGTGACCAGCGTGGCACAACAGGTGGATGGTGAAAATCCACACCTCTATATCCGAAGCGACGATGTCGTTTTATGCCTTCTTCCTTTATTTCACATATATTCTCTCAACTCAATTATGATGTGTTCGTTACGAGTGGGAGCTGCGATTTTAATCGTTCAAAAGTTCGACATTAATTCACTTCTGGAATTGGTTCCTAAATACAAAGTCACCTTTGCGCCGGTAGTGCCTCCTATTGTACTTGCAATTGCCAAAAGTCCAGCTGTTGACCATTTTGACATGTCGTCTTTGCGCATGGTGTTGTCGGGAGCCGCACCACTGGGGAAGAATCTTGAAGATGCCTTTCGAGCCAAGCTTCCCCATGTCATTCTTGGCCAGGGATATGGAATGACTGAGGCGGGGTCAGTGATGACTATGTCGTTAGCCTTTGCAAAGGAGGGTTTCGGGATAAAATCGGGAGGTTGTGGAACAATAATGAGAAATTCAGAAATGAAGATAGTATGCCCGCAAACGGGAGTGTCCCTTCCAAGGAATCGAACTGGGGAGATTTGTATAAGAAGTTTTCAAATGATGAAAGGATACCTCAACGACGAAGAGGCCACCAAGGCTATAATCGACAAAGATGGATGGCTGCACACCGGCGACATAGGTTACGTCGACGACGACGATGAGCTCTTCATTGTCGATCGTCTCAAGGAACTGATCAAATATAAAGGCTTCCAGGTAGCGCCGGCGGAGCTGGAAGCCCTGCTTATATCCCACGGCCACATCGCCGACGCCGCGGTTATACCTATGAATGATGAAGTTGCTGGGGAGGTTCCGGTTACGTTCATTGTCCGATTCGATGGCTCCAACATCACTGAGGATGAAATTAAGCAATACATCTCCAAACAGGTTGTGTTTTATAAGAGGATTAATCGTGTCTTCTTCGTGGATTCCATTCCTAAAAGTCCTTCCGGCAAAATCTTGAGGAGACAACTTAGAGCTTTGCTCGCAGCCAGCATTCTTAGTTAG 1659 47.74 MAAADGSSPEFLFRSKLPEIPISTHLPLHTYCFENISEFKQRPCLINAATGHTYTYGEVQATSRRVAAGLHKLGIGKGDVIMLLLQNTPEFVLAFLAASYLGAAATMANPFFMPAEIAKQAVSSGAKVIITQSAFAEKVKKLSQGSEMIIKVIFIDDDDPPTKGGYKFSSLIDDVAKEEELEMGDVKISPDDVVALPYSSGTTGLPKGVMLTHKGSVTSVAQQVDGENPHLYIRSDDVVLCLLPLFHIYSLNSIMMCSLRVGAAILIVQKFDINSLLELVPKYKVTFAPVVPPIVLAIAKSPAVDHFDMSSLRMVLSGAAPLGKNLEDAFRAKLPHVILGQGYGMTEAGSVMTMSLAFAKEGFGIKSGGCGTIMRNSEMKIVCPQTGVSLPRNRTGEICIRSFQMMKGYLNDEEATKAIIDKDGWLHTGDIGYVDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHGHIADAAVIPMNDEVAGEVPVTFIVRFDGSNITEDEIKQYISKQVVFYKRINRVFFVDSIPKSPSGKILRRQLRALLAASILS 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22576638 22579910 - MELO3C017473.2.1 Cme02g01554 321443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01554 552 Pfam AMP-binding enzyme 34 452 IPR000873 -
Cme02g01554 552 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 7 545 - -
Cme02g01554 552 Gene3D - 448 549 IPR045851 -
Cme02g01554 552 SUPERFAMILY Acetyl-CoA synthetase-like 24 548 - -
Cme02g01554 552 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Cme02g01554 552 CDD 4CL 22 542 - -
Cme02g01554 552 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
Cme02g01554 552 Gene3D - 10 447 IPR042099 -
Cme02g01554 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 545 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01554 Cme05g01441 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01554 Cme-Chr2:22576638 Cme04g01757 Cme-Chr4:25168974 0 dispersed
Cme12g01605 Cme-Chr12:23303176 Cme02g01554 Cme-Chr2:22576638 2.32E-114 dispersed
Cme10g00674 Cme-Chr10:4281476 Cme02g01554 Cme-Chr2:22576638 3.09E-138 transposed
Cme02g01554 Cme-Chr2:22576638 Cme05g01441 Cme-Chr5:23772562 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01554 K01904 - csv:101218077 961.829