Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g01602 | ATGGCCGAGCCCGTATGCGCCGCCGTCGCCGCCGGAATCTTGCCCATTGTCCTCAAAAGCTTCGCCGCCGTTCGCCATCTCAGAATCGACATCAATATTCTTGCTCTAATTGCAGTAATCGGAACAATTGTGCTGAAGGATTATTTGGAAGCAGCCACCATCGTCTTCCTCTTCACCATCGCCGAATGGCTCGAGTCCAGAGCCGCCCACAAGGCCAACGCCGTCATGTCATCCCTTCTAAGCATTGCTCCTCAGAAAGCGGTTCTAGCCGATACCGGCGAAGTTGTCGGCGCCGACGAAGTCAAATTAGGGACTCTACTGGCTGTGAAGGCCGGTGAAGACATACCCATTGATGGAATCGTAGTGGAAGGAAAATGCGAAGTAGATGAGAAAACACTTACAGGTGAATCTTTTCCTGTTCCCAAACAAAAGAATTCCACTGTTTGGGCTGGTACCATTAATCTAAATGGCTATGTTACAGTAAAGACTACTGCCCTTGCCGAAGACTGTGTGGTGGCCAAAATGGCTAAGCTGGTTGAAGAGGCCCAGAACAATAAATCTAGAACTCAAAGGTTCATTGACAAATGTGCCAAATTCTATACTCCAGCTGTTATAATCATATCAACTTGCATAGTAGTGATTCCAGTTGCTTTAAGACTTCCCAATCGCAGCCATTGGTTTCACTTGGCCTTGGTGGTGTTAGTAAGCGCGTGTCCCTGTGCACTCATCCTTTCCACGCCTGTTGCGTCTTTCTGTGCACTTACTAAGGCAGCAACATCTGGTCTTTTAATCAAAGGAGGTGATTACCTTGAAACACTCGGCAAAATTAAGATCATGGCCTTTGATAAAACTGGGACAATAACGAGAGGTGAATTTATGGTGACTGAATTTCAAGTGCTTGATAAGGACAATATAAGCTTAGACACATTGCTGTACTGGGTGTCGAGCATCGAGAGCAAGTCCAGTCATCCAATGGCAGCTGCACTTGTTGACCACGGAAGATCACTATCCATTGATCCCAAACCTGAAAATGTGGATGACTTTCAAAATTTTCCTGGAGAAGGTGTTCATGGAAGAATTGATGGGAAAGACATCTATATTGGAAACCGAAAAATTGCTACAAGAGCCAACTGCGCAACAGTCCCAGAGATCAAAGATGAAGCAAAGGATGGGAGGACTGTTGGATACATATTCTGTGGAACTATTGCAGCTGGAGTCTTCAGTCTGTCTGATTCTTGTAGAACAGGAGCTAAAGAGGCCATGGACGAGCTTAGATCTCTCGGTATAAAAACAGCCATGCTCACCGGAGACAGTTCTGCAGCAGCCTTGCAAGCACAAAAAGAATTGGGAAAGGCTTTACAAACAGTTCATGCCGAACTTCTACCTCAAGACAAGACAAGGCTTATCAATGACTTCAAAAAGGAGGGGCCAACAGCTATGATTGGAGATGGTCTAAACGATGCCCCTGCCTTGGCCACAGCTGATATCGGCATATCAATGGGAATCTCAGGTTCAGCCCTTGCAATAGAAACTGGAGATGTAATTTTAATGACTAATGATATCAGGAAAGTTCCAAAAGCCATTCGACTTGCAAGAAGAGCTAATAACAAAGTAATTGAAAATGTGATTCTGTCGGTTGCTCCTAGGATTGCTATACTTGGTCTGGCATTTGGTGGTCATCCACTTGTTTGGGCAGCAGTTCTTGCTGATGTTGGTGCCTGTGTGCTTGTTATCCTCAACAGTATGCTCCTGCTGCGAGGAACAGACGGACACAAAGGGAAGAAAGCTGGCAAATTTTCTGCTACTCACTGTTCCTCCAAACATAAATGTTGTCATGTAAGCAGCCATTCAGATGAACATAGTGGTCACGCCCACGCCCATGATCATGGTTGCAACGATCACAGTTCTCATTCTTCTAGGCACCATCACCATCACCATCACCATCATCATCATGATGAGCAGGAGGACTGTGGCTCTCTCAAGAAAACTCATGATGGTTGTTTACAACAGAATCATGCTTCCATGTGCGATTCCAAGTTGAAAAATTCAAGTTCATGCAAGAAAAGTAAACTCATGAACCCAAGTTCTAAGATAGATGGTTCTACTGGGTGTGTAAAACTCCGTGAACATGATCACACCCATGATCACGGGTGCAACAGTGATGGCTCTGACTCTTCTAGTCATAGTCATCATCACCATCACAGCCACCACCATCATGAGCACGAGGATTGCCACTCACTCAAGAAAACTCATGAAGTTTGTGTACCTCAGAATCATGCTTCCAAGTGCGACTCCAGGTCAAAATATTCAAGTTTGTGCAACAAAAGTAAACTTGTAGACTCGTGTTCTAAGGTAAATGGTTCTACCGGGAGTGTACAACTCTATGAACATGATCACACTCATGACCATGGGTGCAACATTGACAGTACTGACTCTTCTAGTCATAGTCATCACAACCACCACCACCACCATCATGAGCACGAGGACTGTGGTTCTCTCAAGAAAACTAACGATAGTTGCTTACTTCAGAACTGTGCTTCCAAGTGTGATTCCGGGTTGAAATCTTCAAGTTCATGCAAGAAAAGTGAACTCGTGGATTCAAGTTCTAAGGTAGATGATTCTGCAGGCAGTCTAAAACCCTGTGAACATGGACATGTCCATAACGATCAGCCTGCAGAACACGACCACCATGCTTATTTTTCTTGCGCTGATCATCATGCCAAGGATGTACTCTGCTCTCCAGAGAATACACAAGAGTTTTGTTCGTTTCAGAAGTGTGCATCAAATTCATGTGAGACAATCAAGTGCACAAGCTCACCAGCAAGCCATGATGAATCGGCTGTGATTGTTGAGCTCGAAGAATGTGGATGTTGTACTCATAATACCCAATCTGCTCAACATGATCATGACATCCAAAGTCCCAAATGTGATTTTGATGACAGCCACTCACCCAGTCTTGAACATCATATTAGTAATGATTGTTGCTCTCAAAAGAATACTCAAAAGGTTTCTATATCTCATCCAATGCGTGATTCTGAAACCTGCAAGGAAGGGGTTCATCTTCATTGTGAAGCATCAAATGAAGATAATGGAGCAATCAACAATACTGTAAATATCAAGCTTGAAGCAGATCATTCAAACTCGAAATGTGGAAACACTAGTAATAAGCCAATGGAAAACAGGCAGACGAACAACAACTGTAAAAGCTGCAGAAGGGGAAGTTCACAATTCAAAATTGGAAAAACTTGTGCAGGCTTGGATAAGAGAGAAATGGGTGGGTGTTGTAAGAGCTACATGAAGGAGTGTTGTAGGAAGCATGTCGATATCAGAATGGCAGTTCGAGGAGGCTTAAACGAAATCATCATAGAATAG | 3372 | 44.04 | MAEPVCAAVAAGILPIVLKSFAAVRHLRIDINILALIAVIGTIVLKDYLEAATIVFLFTIAEWLESRAAHKANAVMSSLLSIAPQKAVLADTGEVVGADEVKLGTLLAVKAGEDIPIDGIVVEGKCEVDEKTLTGESFPVPKQKNSTVWAGTINLNGYVTVKTTALAEDCVVAKMAKLVEEAQNNKSRTQRFIDKCAKFYTPAVIIISTCIVVIPVALRLPNRSHWFHLALVVLVSACPCALILSTPVASFCALTKAATSGLLIKGGDYLETLGKIKIMAFDKTGTITRGEFMVTEFQVLDKDNISLDTLLYWVSSIESKSSHPMAAALVDHGRSLSIDPKPENVDDFQNFPGEGVHGRIDGKDIYIGNRKIATRANCATVPEIKDEAKDGRTVGYIFCGTIAAGVFSLSDSCRTGAKEAMDELRSLGIKTAMLTGDSSAAALQAQKELGKALQTVHAELLPQDKTRLINDFKKEGPTAMIGDGLNDAPALATADIGISMGISGSALAIETGDVILMTNDIRKVPKAIRLARRANNKVIENVILSVAPRIAILGLAFGGHPLVWAAVLADVGACVLVILNSMLLLRGTDGHKGKKAGKFSATHCSSKHKCCHVSSHSDEHSGHAHAHDHGCNDHSSHSSRHHHHHHHHHHHDEQEDCGSLKKTHDGCLQQNHASMCDSKLKNSSSCKKSKLMNPSSKIDGSTGCVKLREHDHTHDHGCNSDGSDSSSHSHHHHHSHHHHEHEDCHSLKKTHEVCVPQNHASKCDSRSKYSSLCNKSKLVDSCSKVNGSTGSVQLYEHDHTHDHGCNIDSTDSSSHSHHNHHHHHHEHEDCGSLKKTNDSCLLQNCASKCDSGLKSSSSCKKSELVDSSSKVDDSAGSLKPCEHGHVHNDQPAEHDHHAYFSCADHHAKDVLCSPENTQEFCSFQKCASNSCETIKCTSSPASHDESAVIVELEECGCCTHNTQSAQHDHDIQSPKCDFDDSHSPSLEHHISNDCCSQKNTQKVSISHPMRDSETCKEGVHLHCEASNEDNGAINNTVNIKLEADHSNSKCGNTSNKPMENRQTNNNCKSCRRGSSQFKIGKTCAGLDKREMGGCCKSYMKECCRKHVDIRMAVRGGLNEIIIE | 1123 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 23202305 | 23207402 | + | MELO3C017438.2.1 | Cme02g01602 | 321491 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g01602 | 1123 | MobiDBLite | consensus disorder prediction | 684 | 703 | - | - | |
Cme02g01602 | 1123 | Gene3D | - | 271 | 532 | IPR023214 | - | |
Cme02g01602 | 1123 | PRINTS | H+-transporting ATPase (proton pump) signature | 513 | 538 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme02g01602 | 1123 | PRINTS | H+-transporting ATPase (proton pump) signature | 481 | 497 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme02g01602 | 1123 | Pfam | haloacid dehalogenase-like hydrolase | 276 | 495 | - | - | |
Cme02g01602 | 1123 | ProSitePatterns | Anaphylatoxin domain signature. | 1069 | 1103 | IPR000020 | GO:0005576 | |
Cme02g01602 | 1123 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 31 | 584 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Cme02g01602 | 1123 | Gene3D | - | 291 | 413 | IPR023299 | GO:0000166 | |
Cme02g01602 | 1123 | CDD | P-type_ATPase_HM | 7 | 583 | - | - | |
Cme02g01602 | 1123 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 54 | 559 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme02g01602 | 1123 | SUPERFAMILY | Calcium ATPase, transduction domain A | 94 | 179 | IPR008250 | - | |
Cme02g01602 | 1123 | PRINTS | P-type cation-transporting ATPase superfamily signature | 505 | 517 | - | - | |
Cme02g01602 | 1123 | PRINTS | P-type cation-transporting ATPase superfamily signature | 129 | 143 | - | - | |
Cme02g01602 | 1123 | PRINTS | P-type cation-transporting ATPase superfamily signature | 427 | 437 | - | - | |
Cme02g01602 | 1123 | PRINTS | P-type cation-transporting ATPase superfamily signature | 481 | 500 | - | - | |
Cme02g01602 | 1123 | PRINTS | P-type cation-transporting ATPase superfamily signature | 280 | 294 | - | - | |
Cme02g01602 | 1123 | Gene3D | - | 69 | 183 | - | - | |
Cme02g01602 | 1123 | SFLD | p-type atpase | 263 | 533 | IPR044492 | - | |
Cme02g01602 | 1123 | SFLD | Haloacid Dehalogenase | 263 | 533 | - | - | |
Cme02g01602 | 1123 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED | 6 | 607 | - | - | |
Cme02g01602 | 1123 | MobiDBLite | consensus disorder prediction | 805 | 831 | - | - | |
Cme02g01602 | 1123 | ProSitePatterns | Hypothetical cof family signature 2. | 481 | 503 | - | - | |
Cme02g01602 | 1123 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 6 | 607 | - | - | |
Cme02g01602 | 1123 | SUPERFAMILY | HAD-like | 280 | 582 | IPR036412 | - | |
Cme02g01602 | 1123 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 32 | 274 | IPR023298 | - | |
Cme02g01602 | 1123 | MobiDBLite | consensus disorder prediction | 615 | 661 | - | - | |
Cme02g01602 | 1123 | MobiDBLite | consensus disorder prediction | 715 | 743 | - | - | |
Cme02g01602 | 1123 | Pfam | E1-E2 ATPase | 90 | 258 | - | - | |
Cme02g01602 | 1123 | MobiDBLite | consensus disorder prediction | 615 | 635 | - | - | |
Cme02g01602 | 1123 | MobiDBLite | consensus disorder prediction | 684 | 700 | - | - | |
Cme02g01602 | 1123 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 282 | 288 | IPR018303 | - | |
Cme02g01602 | 1123 | TIGRFAM | ATPase-IB2_Cd: cadmium-translocating P-type ATPase | 31 | 586 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g01602 | Cme-Chr2:23202305 | Cme05g01332 | Cme-Chr5:22206927 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g01602 | K01534 | - | csv:101211188 | 1982.22 |