Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01602 ATGGCCGAGCCCGTATGCGCCGCCGTCGCCGCCGGAATCTTGCCCATTGTCCTCAAAAGCTTCGCCGCCGTTCGCCATCTCAGAATCGACATCAATATTCTTGCTCTAATTGCAGTAATCGGAACAATTGTGCTGAAGGATTATTTGGAAGCAGCCACCATCGTCTTCCTCTTCACCATCGCCGAATGGCTCGAGTCCAGAGCCGCCCACAAGGCCAACGCCGTCATGTCATCCCTTCTAAGCATTGCTCCTCAGAAAGCGGTTCTAGCCGATACCGGCGAAGTTGTCGGCGCCGACGAAGTCAAATTAGGGACTCTACTGGCTGTGAAGGCCGGTGAAGACATACCCATTGATGGAATCGTAGTGGAAGGAAAATGCGAAGTAGATGAGAAAACACTTACAGGTGAATCTTTTCCTGTTCCCAAACAAAAGAATTCCACTGTTTGGGCTGGTACCATTAATCTAAATGGCTATGTTACAGTAAAGACTACTGCCCTTGCCGAAGACTGTGTGGTGGCCAAAATGGCTAAGCTGGTTGAAGAGGCCCAGAACAATAAATCTAGAACTCAAAGGTTCATTGACAAATGTGCCAAATTCTATACTCCAGCTGTTATAATCATATCAACTTGCATAGTAGTGATTCCAGTTGCTTTAAGACTTCCCAATCGCAGCCATTGGTTTCACTTGGCCTTGGTGGTGTTAGTAAGCGCGTGTCCCTGTGCACTCATCCTTTCCACGCCTGTTGCGTCTTTCTGTGCACTTACTAAGGCAGCAACATCTGGTCTTTTAATCAAAGGAGGTGATTACCTTGAAACACTCGGCAAAATTAAGATCATGGCCTTTGATAAAACTGGGACAATAACGAGAGGTGAATTTATGGTGACTGAATTTCAAGTGCTTGATAAGGACAATATAAGCTTAGACACATTGCTGTACTGGGTGTCGAGCATCGAGAGCAAGTCCAGTCATCCAATGGCAGCTGCACTTGTTGACCACGGAAGATCACTATCCATTGATCCCAAACCTGAAAATGTGGATGACTTTCAAAATTTTCCTGGAGAAGGTGTTCATGGAAGAATTGATGGGAAAGACATCTATATTGGAAACCGAAAAATTGCTACAAGAGCCAACTGCGCAACAGTCCCAGAGATCAAAGATGAAGCAAAGGATGGGAGGACTGTTGGATACATATTCTGTGGAACTATTGCAGCTGGAGTCTTCAGTCTGTCTGATTCTTGTAGAACAGGAGCTAAAGAGGCCATGGACGAGCTTAGATCTCTCGGTATAAAAACAGCCATGCTCACCGGAGACAGTTCTGCAGCAGCCTTGCAAGCACAAAAAGAATTGGGAAAGGCTTTACAAACAGTTCATGCCGAACTTCTACCTCAAGACAAGACAAGGCTTATCAATGACTTCAAAAAGGAGGGGCCAACAGCTATGATTGGAGATGGTCTAAACGATGCCCCTGCCTTGGCCACAGCTGATATCGGCATATCAATGGGAATCTCAGGTTCAGCCCTTGCAATAGAAACTGGAGATGTAATTTTAATGACTAATGATATCAGGAAAGTTCCAAAAGCCATTCGACTTGCAAGAAGAGCTAATAACAAAGTAATTGAAAATGTGATTCTGTCGGTTGCTCCTAGGATTGCTATACTTGGTCTGGCATTTGGTGGTCATCCACTTGTTTGGGCAGCAGTTCTTGCTGATGTTGGTGCCTGTGTGCTTGTTATCCTCAACAGTATGCTCCTGCTGCGAGGAACAGACGGACACAAAGGGAAGAAAGCTGGCAAATTTTCTGCTACTCACTGTTCCTCCAAACATAAATGTTGTCATGTAAGCAGCCATTCAGATGAACATAGTGGTCACGCCCACGCCCATGATCATGGTTGCAACGATCACAGTTCTCATTCTTCTAGGCACCATCACCATCACCATCACCATCATCATCATGATGAGCAGGAGGACTGTGGCTCTCTCAAGAAAACTCATGATGGTTGTTTACAACAGAATCATGCTTCCATGTGCGATTCCAAGTTGAAAAATTCAAGTTCATGCAAGAAAAGTAAACTCATGAACCCAAGTTCTAAGATAGATGGTTCTACTGGGTGTGTAAAACTCCGTGAACATGATCACACCCATGATCACGGGTGCAACAGTGATGGCTCTGACTCTTCTAGTCATAGTCATCATCACCATCACAGCCACCACCATCATGAGCACGAGGATTGCCACTCACTCAAGAAAACTCATGAAGTTTGTGTACCTCAGAATCATGCTTCCAAGTGCGACTCCAGGTCAAAATATTCAAGTTTGTGCAACAAAAGTAAACTTGTAGACTCGTGTTCTAAGGTAAATGGTTCTACCGGGAGTGTACAACTCTATGAACATGATCACACTCATGACCATGGGTGCAACATTGACAGTACTGACTCTTCTAGTCATAGTCATCACAACCACCACCACCACCATCATGAGCACGAGGACTGTGGTTCTCTCAAGAAAACTAACGATAGTTGCTTACTTCAGAACTGTGCTTCCAAGTGTGATTCCGGGTTGAAATCTTCAAGTTCATGCAAGAAAAGTGAACTCGTGGATTCAAGTTCTAAGGTAGATGATTCTGCAGGCAGTCTAAAACCCTGTGAACATGGACATGTCCATAACGATCAGCCTGCAGAACACGACCACCATGCTTATTTTTCTTGCGCTGATCATCATGCCAAGGATGTACTCTGCTCTCCAGAGAATACACAAGAGTTTTGTTCGTTTCAGAAGTGTGCATCAAATTCATGTGAGACAATCAAGTGCACAAGCTCACCAGCAAGCCATGATGAATCGGCTGTGATTGTTGAGCTCGAAGAATGTGGATGTTGTACTCATAATACCCAATCTGCTCAACATGATCATGACATCCAAAGTCCCAAATGTGATTTTGATGACAGCCACTCACCCAGTCTTGAACATCATATTAGTAATGATTGTTGCTCTCAAAAGAATACTCAAAAGGTTTCTATATCTCATCCAATGCGTGATTCTGAAACCTGCAAGGAAGGGGTTCATCTTCATTGTGAAGCATCAAATGAAGATAATGGAGCAATCAACAATACTGTAAATATCAAGCTTGAAGCAGATCATTCAAACTCGAAATGTGGAAACACTAGTAATAAGCCAATGGAAAACAGGCAGACGAACAACAACTGTAAAAGCTGCAGAAGGGGAAGTTCACAATTCAAAATTGGAAAAACTTGTGCAGGCTTGGATAAGAGAGAAATGGGTGGGTGTTGTAAGAGCTACATGAAGGAGTGTTGTAGGAAGCATGTCGATATCAGAATGGCAGTTCGAGGAGGCTTAAACGAAATCATCATAGAATAG 3372 44.04 MAEPVCAAVAAGILPIVLKSFAAVRHLRIDINILALIAVIGTIVLKDYLEAATIVFLFTIAEWLESRAAHKANAVMSSLLSIAPQKAVLADTGEVVGADEVKLGTLLAVKAGEDIPIDGIVVEGKCEVDEKTLTGESFPVPKQKNSTVWAGTINLNGYVTVKTTALAEDCVVAKMAKLVEEAQNNKSRTQRFIDKCAKFYTPAVIIISTCIVVIPVALRLPNRSHWFHLALVVLVSACPCALILSTPVASFCALTKAATSGLLIKGGDYLETLGKIKIMAFDKTGTITRGEFMVTEFQVLDKDNISLDTLLYWVSSIESKSSHPMAAALVDHGRSLSIDPKPENVDDFQNFPGEGVHGRIDGKDIYIGNRKIATRANCATVPEIKDEAKDGRTVGYIFCGTIAAGVFSLSDSCRTGAKEAMDELRSLGIKTAMLTGDSSAAALQAQKELGKALQTVHAELLPQDKTRLINDFKKEGPTAMIGDGLNDAPALATADIGISMGISGSALAIETGDVILMTNDIRKVPKAIRLARRANNKVIENVILSVAPRIAILGLAFGGHPLVWAAVLADVGACVLVILNSMLLLRGTDGHKGKKAGKFSATHCSSKHKCCHVSSHSDEHSGHAHAHDHGCNDHSSHSSRHHHHHHHHHHHDEQEDCGSLKKTHDGCLQQNHASMCDSKLKNSSSCKKSKLMNPSSKIDGSTGCVKLREHDHTHDHGCNSDGSDSSSHSHHHHHSHHHHEHEDCHSLKKTHEVCVPQNHASKCDSRSKYSSLCNKSKLVDSCSKVNGSTGSVQLYEHDHTHDHGCNIDSTDSSSHSHHNHHHHHHEHEDCGSLKKTNDSCLLQNCASKCDSGLKSSSSCKKSELVDSSSKVDDSAGSLKPCEHGHVHNDQPAEHDHHAYFSCADHHAKDVLCSPENTQEFCSFQKCASNSCETIKCTSSPASHDESAVIVELEECGCCTHNTQSAQHDHDIQSPKCDFDDSHSPSLEHHISNDCCSQKNTQKVSISHPMRDSETCKEGVHLHCEASNEDNGAINNTVNIKLEADHSNSKCGNTSNKPMENRQTNNNCKSCRRGSSQFKIGKTCAGLDKREMGGCCKSYMKECCRKHVDIRMAVRGGLNEIIIE 1123
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23202305 23207402 + MELO3C017438.2.1 Cme02g01602 321491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01602 1123 MobiDBLite consensus disorder prediction 684 703 - -
Cme02g01602 1123 Gene3D - 271 532 IPR023214 -
Cme02g01602 1123 PRINTS H+-transporting ATPase (proton pump) signature 513 538 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme02g01602 1123 PRINTS H+-transporting ATPase (proton pump) signature 481 497 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme02g01602 1123 Pfam haloacid dehalogenase-like hydrolase 276 495 - -
Cme02g01602 1123 ProSitePatterns Anaphylatoxin domain signature. 1069 1103 IPR000020 GO:0005576
Cme02g01602 1123 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 31 584 IPR027256 GO:0006812|GO:0016021|GO:0019829
Cme02g01602 1123 Gene3D - 291 413 IPR023299 GO:0000166
Cme02g01602 1123 CDD P-type_ATPase_HM 7 583 - -
Cme02g01602 1123 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 54 559 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme02g01602 1123 SUPERFAMILY Calcium ATPase, transduction domain A 94 179 IPR008250 -
Cme02g01602 1123 PRINTS P-type cation-transporting ATPase superfamily signature 505 517 - -
Cme02g01602 1123 PRINTS P-type cation-transporting ATPase superfamily signature 129 143 - -
Cme02g01602 1123 PRINTS P-type cation-transporting ATPase superfamily signature 427 437 - -
Cme02g01602 1123 PRINTS P-type cation-transporting ATPase superfamily signature 481 500 - -
Cme02g01602 1123 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Cme02g01602 1123 Gene3D - 69 183 - -
Cme02g01602 1123 SFLD p-type atpase 263 533 IPR044492 -
Cme02g01602 1123 SFLD Haloacid Dehalogenase 263 533 - -
Cme02g01602 1123 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 6 607 - -
Cme02g01602 1123 MobiDBLite consensus disorder prediction 805 831 - -
Cme02g01602 1123 ProSitePatterns Hypothetical cof family signature 2. 481 503 - -
Cme02g01602 1123 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 6 607 - -
Cme02g01602 1123 SUPERFAMILY HAD-like 280 582 IPR036412 -
Cme02g01602 1123 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 274 IPR023298 -
Cme02g01602 1123 MobiDBLite consensus disorder prediction 615 661 - -
Cme02g01602 1123 MobiDBLite consensus disorder prediction 715 743 - -
Cme02g01602 1123 Pfam E1-E2 ATPase 90 258 - -
Cme02g01602 1123 MobiDBLite consensus disorder prediction 615 635 - -
Cme02g01602 1123 MobiDBLite consensus disorder prediction 684 700 - -
Cme02g01602 1123 ProSitePatterns E1-E2 ATPases phosphorylation site. 282 288 IPR018303 -
Cme02g01602 1123 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 31 586 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01602 Cme-Chr2:23202305 Cme05g01332 Cme-Chr5:22206927 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01602 K01534 - csv:101211188 1982.22