Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01636 ATGCCTCGCCGAATACTTCAAGGAAGCTCTAAAGATCAGATGAAGAGCTCTTCATCTCTGCTACAGTCTCCAGTTTTCTGCTTCTTCCTTGGGATGTTAGCTGTGCTTGTTATATTGCTGATTCTCATATTGATCTTTAGGAAGTCTCTTAAACAAAATAAAGTGGTGAAGTTGTTAACACAAAGTGGAACAACTCAAGCATCAACAGATTTGTTAAGCGATAACCTGCATTCTTTAAGTTACTTTGACTTTCACACACTGAAAAAGGCAACAAAGAATTTTAACCCAAAGAATCTTCTAGGCCAGGGAGGATTTGGACCTGTCTATCTGGGTACACTTGAAGATGGGAGGTTAGTTGCAATTAAGAAACTTTCACTTAACAAATCCCAACAAGGAGAAGCAGAATTTCTATCAGAAGTCAGACTGATAACAAGCATCCAACACAAGAACCTTGTTCGCCTGCTTGGTTGTTGCTCCGATGGGCCTCAACGGCTACTGGTGTATGAATACATGGAGAACAGGAGTTTAGATCTCATAATATATGGTGGAAGTGACCAAATCCTCAACTGGAACACCAGATTAAAGATTATCAGAGGCATTGCCAAAGGGTTGCAGTATCTTCATGAGGATTCCCATCTAAGAATAATTCACCGAGACATCAAAGCAAGCAATATTCTTCTTGATAACAAATTTCAACCGAAGATTGGTGATTTTGGGCTGGCCAGAGGTTACACAGCGCCAGAATATGCAATTAGGGGAGAACTGTCAGAGAAGGCAGATGTATACAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTGGCAGGAAAAACACAAATCTTTCTTTACCAACCGAAATGCAGTATCTTCCTGAATATGCATGGAAACTATATGAGAGGTCAGCACTGATCGAACTTGTGGATCCAAAGATGAAGGAGGGTGGATTTTTGGAGAAGAATGTAGCACATGCAATTCAAGTTGCATTGTTATGCCTTCAACCTCATGGCAATCTAAGACCTGCAATGTCTGAGATTGTTGCCATGCTAACATACAAGTTTGAAATTGTTCAAACGCCTTTAAAACCAGCTTTCTTAGAAAGAAGGCACAAAAGGAACAGAGATCTATCGTTGAGTAGTTATGCAGATACCACTCCATCTCCTTTACAACAAAAAAATGAATATCACCAAGGAACATCTCCTCCACAAGAAACTCTCACCTTGTGGGTTAATCAGATACATTAA 1239 39.95 MPRRILQGSSKDQMKSSSSLLQSPVFCFFLGMLAVLVILLILILIFRKSLKQNKVVKLLTQSGTTQASTDLLSDNLHSLSYFDFHTLKKATKNFNPKNLLGQGGFGPVYLGTLEDGRLVAIKKLSLNKSQQGEAEFLSEVRLITSIQHKNLVRLLGCCSDGPQRLLVYEYMENRSLDLIIYGGSDQILNWNTRLKIIRGIAKGLQYLHEDSHLRIIHRDIKASNILLDNKFQPKIGDFGLARGYTAPEYAIRGELSEKADVYSFGVLVLEIISGRKNTNLSLPTEMQYLPEYAWKLYERSALIELVDPKMKEGGFLEKNVAHAIQVALLCLQPHGNLRPAMSEIVAMLTYKFEIVQTPLKPAFLERRHKRNRDLSLSSYADTTPSPLQQKNEYHQGTSPPQETLTLWVNQIH 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23513142 23516082 + MELO3C017405.2.1 Cme02g01636 321525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01636 412 SUPERFAMILY Protein kinase-like (PK-like) 74 349 IPR011009 -
Cme02g01636 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Cme02g01636 412 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 367 - -
Cme02g01636 412 MobiDBLite consensus disorder prediction 374 400 - -
Cme02g01636 412 PANTHER RECEPTOR-LIKE KINASE 70 367 - -
Cme02g01636 412 SMART serkin_6 94 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01636 412 MobiDBLite consensus disorder prediction 376 400 - -
Cme02g01636 412 CDD STKc_IRAK 100 349 - -
Cme02g01636 412 Gene3D Phosphorylase Kinase; domain 1 64 170 - -
Cme02g01636 412 Pfam Protein tyrosine and serine/threonine kinase 98 347 IPR001245 GO:0004672|GO:0006468
Cme02g01636 412 Gene3D Transferase(Phosphotransferase) domain 1 171 357 - -
Cme02g01636 412 ProSiteProfiles Protein kinase domain profile. 94 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01636 Cme-Chr2:23513142 Cme01g01524 Cme-Chr1:20193869 3.40E-93 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64699 PF07714 PK_Tyr_Ser-Thr 6.40E-40 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01636 - - csv:101203677 687.567