Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01642 TCAAATAATACAATTTCCTCACTTCTTTATAATCCCCTTCACTTCACTCTCCTTCTTCCTTCAAATCTCTTCCCCTGGCCGGCAACATCTTCCACCATGAAGAACTTACCTCTCTACTTCCTCCGATCTCCTCCATCTCTTCGCTTGCCGTTGCCAGCCGCCAACCACTTCTTGTCTCACCTCTCCTATTTCATAACCATCTCACTTTTTGGCTTTGGAGCTCTAAAGCTCACCAACACTAGAACCTCCTCCTCCCCAAGTGACCTCAACCTTTTCTTCACCTCAGTCTCAGCCGTCTCGGTATCAAGCATGTCCGTCGTCGAAATGGAAGTTTTTTCCAACTTCCAACTTCTCATCATCACCACTCTCATGTTCCTCGGCGGTGAGGTTTTTGTCTCCGCCGTTGGGTTCCAACTCTCTCGTCGGTTCAAATATTTGAACGAAAAAAACCATGTCGGTTCGGTTCGGTCCATTGAGATGGGAAGTGGGACATCGTCATCCACGATGGTCACCATTGATGAATTGGGTATCTCAAAATCGTGTTCAAAGCTTTTGGGTCATACGATAATCGGATATCTTTTGGGGACAAATATTCTTGGTTCTTTTTTCATTTTCGTATACATTCTTGTGGTACCTCATGCAAAGCAAGTGCTTGAAAGCAAAGGCATCAATTACCTTACTTTTTCAATTTTTAGTACGATTTCTACTTTTACCAATTGTGGGTTCATACCTACTAATGAAAATATGATCGCCTTCAATAACAACTCCGGCCTTTTGCTCATCCTCATACCGCAGGTATTGTTGGGAGGTTGCTTATATCCAGTGGGTCTCCGGTTGGTGATAATGGCGGCAGCGAAGGTGACGGGGAAGAAGGAGTGGAGATACATATTGAAGAACGACTCGGAGATGGGGTATTCCCATCTCTTGTCGGGGCTCCGTTGCGGGTTTCTGGTGGTAACGGTGGCGGGATTCATAGTTTTTCAATTGATTATATTTTGCTCATTGGAATGGAACAACTCCGGCGGAATTTGGGATGGCCTGAATCCCTACCAGAAGTTTGTGGCCTCACTTTTTCAGGTCATCAACTCAAGACATACCGGAGAATCCGTCGTGGATATCTCAGTCATCTCGCAGGCCATCTTGGTCATTTTTGTTGTCATGATGTATCTCCCACCATACACAACTTTTTTACCCATAAGGAACTACAAAGAGACAGCTTCAATGACTGATGGGAAGGACAGAAGACAACAATTGGTGGAATTATTCACATTCTCACAGCTCTCTTACTTGGCCATTTTTATCATTCTCTTATGCATCACTGAGAAACAAAAATTGAGAGATGATCCTCTTAACTTTACTGTCCTCAACATCACCATTGAAGTCATCAGTGCATATGGAAATGTTGGATTCTCAAGTGGGTATAGCTGCAAAAGACAAATTAAAGTTGATAGCTCTTGCAAAGATGCATGGTATGGATTTGCTGGAAGATGGAGTTCAAAGGGAAAATTCATTCTTATTCTTGTCATGATTTTTGGAAGAATGAAAAGTTTTACTATGCATAGTGGTAAAGCTTGGAAATTATCATAA 1587 42.79 SNNTISSLLYNPLHFTLLLPSNLFPWPATSSTMKNLPLYFLRSPPSLRLPLPAANHFLSHLSYFITISLFGFGALKLTNTRTSSSPSDLNLFFTSVSAVSVSSMSVVEMEVFSNFQLLIITTLMFLGGEVFVSAVGFQLSRRFKYLNEKNHVGSVRSIEMGSGTSSSTMVTIDELGISKSCSKLLGHTIIGYLLGTNILGSFFIFVYILVVPHAKQVLESKGINYLTFSIFSTISTFTNCGFIPTNENMIAFNNNSGLLLILIPQVLLGGCLYPVGLRLVIMAAAKVTGKKEWRYILKNDSEMGYSHLLSGLRCGFLVVTVAGFIVFQLIIFCSLEWNNSGGIWDGLNPYQKFVASLFQVINSRHTGESVVDISVISQAILVIFVVMMYLPPYTTFLPIRNYKETASMTDGKDRRQQLVELFTFSQLSYLAIFIILLCITEKQKLRDDPLNFTVLNITIEVISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMHSGKAWKLS 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23589216 23594405 + MELO3C017399.2.1 Cme02g01642 321531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01642 528 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 50 528 - -
Cme02g01642 528 Pfam Cation transport protein 76 518 IPR003445 GO:0006812|GO:0008324|GO:0055085
Cme02g01642 528 PANTHER SODIUM TRANSPORTER HKT1 50 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01641 Cme-Chr2:23558292 Cme02g01642 Cme-Chr2:23589216 5.06E-51 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01642 K24976 - csv:101206239 845.884