Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01648 ATGGCATTGCCATGGACGACCCTCATCATTCTCATTGTCATTTCATCAGAGATTATTGTTTCTTGTAGTGCTTCTACCGATGCGGATGCGCTTCTCAAGTTCAAGAGCTCTCTTGAAATTAGTAGCAACAAAGACGCATTGGTGAATTGGGGTTCGGGGGGGTCTTCATCTTCCCCTTGCTCCGGCGATAAGGCGAATTGGGTCGGTATTCTTTGCGAGAAGGGAAATGTTTGGGGATTGAAGCTTGAGAATATGGGGCTCAAAGGGAATATTGACATTGAGTCCCTTGAAGGGGTGCCTCATTTAAGGTCACTTAGTCTTATGAATAATGAGTTTGAAGGTTCTTTGCCTGATGTTAAGAGACTTGGGGCATTGAAATCTTTGTATTTGTCAAGGAATCACTTCTCAGGGAATATTCCTGGTGATTTTTTCTCAAGTATGTTGTCTTTGAAGAAGGTTCATTTGGCTTATAATCAATTGGAAGGTCAAATTCCTTGGTCTTTGGTTGAGTTGCATCGTTTGTTGGAATTAAGGCTTGAAGGAAACAAATTTTCTGGTCAAATTCCTAATTTTCAACAAAAAACTATCAAGTCCTTTAATGTCTCTAATAATGATCAACTTCATGGTCAAATCCCTCAAATTCTCTCCCGCTTGGATCCGTCCTCCTTTTCAGGCATTGAAGGTTTATGTGGAGCACCACTTAAGAAACCATGCAACGCCGCAAAGGTGCCATCAATTGGGAGCATTATCATGGTTTCAATAGCTGTGACATTGGCTCTTCTTGCCATTGGTGCAGGAATAGTCATCCTGAGCCGTTGTAACCAATCATCGTCTAACGAAGAAGATCCAGCCAACGGAAAATCTCCAAGTGCTAGTGAGCTAGATCCAGGAGCCGGGGTGAAGTCACCAGACCGTGGCTCGAGTAATGGAAGCGTGACAGGAAAACGGTCAGCCGATAGTGCCAAATTGTCATTTGTAAGAGAGGATTCAGAGAGGTTTGATTTATCAGATTTGCTTAAAGCCTCAGCAGAAATCCTAGGAAGTGGGTGCTTTGGTTCTTCTTACAAAGCAGCTTTGACCAATGGACCTGTGATGGTTGTAAAGAGGTTTAAGCAAATGAACAATGTGGGTAGAGAGGAATTCCAAGAACATATGAGAAGAATTGGAAGATTGAAACACACTAATTTGCTTCCTCTTGTGGCTTACTATTACAAAAAAGAAGAAAAGCTTCTCATAACAGATTACGTTGAGAAGGGCAGCTTGGCTGTTCAACTTCATGGACATAAAGCTGTGGGACAACCAGCCCTGGATTGGCCTGCAAGATTGAAGATCATCAAGGGCGTTGGAAAGGGTCTTCGATATCTATACAGTGAGCTTCCAAGTTTGATAACCCCACACGGCCATCTCAAGTCCTCAAATGTACTTCTAAAGGCAAATTACGAGCCCCTTCTTTCTGACTACGGCCTAATCCCGGTCGTGAACCAAGAGCATGCTCATGAGCTAATGGTGGCCTACAAATCCCCGGAGTACTCGCAACAAAGTCGCATTACAAAGAAGACAGACGTATGGAGTTTTGGGCTATTGATCCTAGAAATTCTATCAGGTCAATTCCCAGCCAACTTTTTGCATCAGAACAAGAGCGGGGAAGAGGAAGATTTGGCAAGTTGGGTAAAATCAATTCCTGAAAAAGAATGGAACACCCGAGTATTTGATAAGGAAATGGGACCAACCAAGAGCAGTGAGGGTGAAATGATGAAGCTTCTAAGAATTGCAATGGCGTGTTGCGAAAGCGACTTTGAGAAACGGTTGGATTTACGAGAAGCTGTGGAGAAGATTGAGGAAGTGAAAGAAAAAGATGGGGATGAAGACTTCTATTCTTCATATGCAAGTGAAGCTGATATTAGATCTTCAAGAGGATTATCTGATGAACTCAACTTCACCATGTGA 1947 42.84 MALPWTTLIILIVISSEIIVSCSASTDADALLKFKSSLEISSNKDALVNWGSGGSSSSPCSGDKANWVGILCEKGNVWGLKLENMGLKGNIDIESLEGVPHLRSLSLMNNEFEGSLPDVKRLGALKSLYLSRNHFSGNIPGDFFSSMLSLKKVHLAYNQLEGQIPWSLVELHRLLELRLEGNKFSGQIPNFQQKTIKSFNVSNNDQLHGQIPQILSRLDPSSFSGIEGLCGAPLKKPCNAAKVPSIGSIIMVSIAVTLALLAIGAGIVILSRCNQSSSNEEDPANGKSPSASELDPGAGVKSPDRGSSNGSVTGKRSADSAKLSFVREDSERFDLSDLLKASAEILGSGCFGSSYKAALTNGPVMVVKRFKQMNNVGREEFQEHMRRIGRLKHTNLLPLVAYYYKKEEKLLITDYVEKGSLAVQLHGHKAVGQPALDWPARLKIIKGVGKGLRYLYSELPSLITPHGHLKSSNVLLKANYEPLLSDYGLIPVVNQEHAHELMVAYKSPEYSQQSRITKKTDVWSFGLLILEILSGQFPANFLHQNKSGEEEDLASWVKSIPEKEWNTRVFDKEMGPTKSSEGEMMKLLRIAMACCESDFEKRLDLREAVEKIEEVKEKDGDEDFYSSYASEADIRSSRGLSDELNFTM 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23696033 23700164 + MELO3C017385.2.1 Cme02g01648 321537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01648 648 ProSiteProfiles Protein kinase domain profile. 340 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01648 648 SUPERFAMILY L domain-like 58 218 - -
Cme02g01648 648 Gene3D Ribonuclease Inhibitor 26 145 IPR032675 -
Cme02g01648 648 Gene3D Transferase(Phosphotransferase) domain 1 416 634 - -
Cme02g01648 648 Gene3D Phosphorylase Kinase; domain 1 307 415 - -
Cme02g01648 648 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 626 - -
Cme02g01648 648 MobiDBLite consensus disorder prediction 278 316 - -
Cme02g01648 648 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 8 626 - -
Cme02g01648 648 Gene3D Ribonuclease Inhibitor 146 239 IPR032675 -
Cme02g01648 648 Pfam Leucine rich repeat N-terminal domain 25 72 IPR013210 -
Cme02g01648 648 Pfam Protein tyrosine and serine/threonine kinase 344 611 IPR001245 GO:0004672|GO:0006468
Cme02g01648 648 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Cme02g01648 648 SUPERFAMILY Protein kinase-like (PK-like) 344 613 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01648 Cme-Chr2:23696033 Cme07g00938 Cme-Chr7:9844632 0 dispersed
Cme02g01648 Cme-Chr2:23696033 Cme04g00319 Cme-Chr4:2496731 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64700 PF07714 PK_Tyr_Ser-Thr 1.50E-29 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01648 - - csv:101213261 1170.61