Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01681 ATGCCGGACACACCTACATCGCCAAAGAGCGGTGGCCGGCTGTCGCTAATGGAGAATCTGCTCGGGCTTCTCCGTATTCGTATCATTCGTGGTGTCAATCTCGCTGTTCGTGATGTTCGCAGTAGCGATCCTTATGTCGTCGTCAAGATGGGAAAGCAAAAATTAAAGACACGGGTGATAAAGAAGGATGTCAATCCTGTATGGAATGAAGATCTAACTCTCTCTGTTAGTGACCCGAACCTTCCCATTAAACTGACGGTTTACGATCACGACACATTTAGCAAGGATGATAAAATGGGGTACGCCGAGTTCGATATCAAAGCATTTATGGAAGCTCTGAAGATGAACTTGAAGAATCTTCCCAGTGGAACGACAATAACACGAATGCTACCAGCAAGGCAAAACTGTCTAGCTGAAGAGAGCTGCGTCGTCTGGAAAGATGGTAAAGTAGTCCAAGATATCTACCTTAGATTGAGAAATGTCGAATGCGGGGAAGTCGAGGTTCAATTGCAGTGGATTAATCTTCCAAGCTCCAAAGGATAA 543 45.3 MPDTPTSPKSGGRLSLMENLLGLLRIRIIRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIKKDVNPVWNEDLTLSVSDPNLPIKLTVYDHDTFSKDDKMGYAEFDIKAFMEALKMNLKNLPSGTTITRMLPARQNCLAEESCVVWKDGKVVQDIYLRLRNVECGEVEVQLQWINLPSSKG 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23935345 23938265 + MELO3C017358.2.1 Cme02g01681 321570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01681 180 CDD C2_ArfGAP 21 164 - -
Cme02g01681 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 11 179 - -
Cme02g01681 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 11 179 IPR044562 -
Cme02g01681 180 Gene3D C2 domain 18 179 IPR035892 -
Cme02g01681 180 SMART C2_3c 23 118 IPR000008 -
Cme02g01681 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 168 IPR035892 -
Cme02g01681 180 ProSiteProfiles C2 domain profile. 8 119 IPR000008 -
Cme02g01681 180 Pfam C2 domain 22 110 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01681 Cme-Chr2:23935345 Cme06g01517 Cme-Chr6:14634544 2.34E-85 dispersed
Cme08g00083 Cme-Chr8:567674 Cme02g01681 Cme-Chr2:23935345 7.74E-48 transposed
Cme09g01152 Cme-Chr9:16169706 Cme02g01681 Cme-Chr2:23935345 9.59E-41 transposed
Cme10g00034 Cme-Chr10:307339 Cme02g01681 Cme-Chr2:23935345 4.41E-32 transposed
Cme12g00824 Cme-Chr12:14908072 Cme02g01681 Cme-Chr2:23935345 5.60E-45 transposed
Cme12g01105 Cme-Chr12:18945352 Cme02g01681 Cme-Chr2:23935345 9.00E-42 transposed
Cme12g01829 Cme-Chr12:24675963 Cme02g01681 Cme-Chr2:23935345 5.07E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01681 - - csv:101220972 325.094