Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01691 ATGGGGAGTGGAACTCTCGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGCACTTCTTCTTCTTCTTCGTCTACTTCCAATTCTAATTTTGGCTCTAATTCTGATTCTTCTGATCCTAATCTCAATTACCCAAATCCCCATAAGTTTGATTATGTGGATAATGGTGGTGTTAGTGGTGACCAATTGTTGAGTAGCGATTTACGCGCCCAATCGTCCATTGCCCACAAACGCAAACCTCTTAGGAAACAAACCCGACTCGGAGAAGGAGGGATTCTTGAGCAATTACCTGAGGAGGAGGACGACGATCTTGATTACTCTGCCTTGAAGCTCATTAAAGTTCCTAAACGGATCAATCACTTACGAAATCCTCCTCCTCCTCCTCTTTCTGCTTTAATGGACTCTCACAAGAAGGGCGGGTTGGAAACTGAATTTTTCACAGAGTATGGAGAGGCCAGCAGATATCAGGTTCAAGAAATAATTGGTAAAGGCAGCTATGGGGTTGTTGGTTCCGCTGTTGATACCCACACTGATGAGAAGGTTGCAATTAAGAAAATTAACGATGTTTTTGAGCACGTTTCTGATGCCACAAGGATTTTAAGAGAAATTAAACTCCTACGGCTGCTCCGTCATCCAGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTTAGAGATATTTATGTTGTTTTTGAGTTGATGGAATCTGATCTCCACCAAGTAATTAAGGCCAATGATGATCTCACTCCTGAGCACCATCAGTTTTTCTTGTATCAGCTTCTTCGTGGTCTGAAATATATTCATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAAAATATTTTAGCTAATGCTGACTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCACCATCTGCTATTTTCTGGACTGACTACGTTGCAACTCGATGGTATCGTGCTCCCGAACTTTGTGGCTCTTTTTTCTCAAAATACACTCCAGCAATTGATATTTGGAGCATTGGATGCATTTTTGCGGAAATGCTTACTGGAAAGCCACTGTTTCCTGGGAAAAATGTGGTGCACCAACTGGATCTGATGACTGATGTGCTTGGCACACCTTCTGCTGAGTCCATTGCTAGGATTCGGAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTTCCCAATGCTGATCCCTTGGCTCTCCGATTGCTTCAACGCTTGCTTGCATTTGATCCCAAAGACCGTCCCACTGCTGAAGAGGCATTAGCTGATCCGTATTTTCAAGGTTTGGCTAATGTGGATCGAGAACCATCAACACAACCAATTTCAAAACTTGAATTTGAATTTGAGAGAAGAAAGTTAACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATATTGGAGTATCATCCTCAGATGCTACAAGAATATCTCCGCAGTGGAGAACAAACTAGCTTCATGTACCCAAGTGGTGTTGATCGCTTCAAACGCCAGTTTGCTCATCTAGAGGAACATTATGGTAAGGGTGAAAGAAGTACTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGATTCCTGCACCAAAAGATGAAGCTGGACAACGCAATGATTTAGAAGGAAGAAATGTTGCTACATCTCTTCAGAGTCCTCCAAAGTCGCAAGGGGATGGTTCCGAAAACGCAAACAGTAACGAACAAAATGGACAAAACAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCCTCTAAATGTATAGGTGTTAAACCAAGAAAAGACCTAGAGGAGGAACCGATTTCAGAGACAACTGACGAGGCAGTTGACGGATTGTCTCATAAGGTGTCAGCCTTGCATACCTGA 1938 42.26 MGSGTLVDGVRRWFQRRTSSSSSSTSNSNFGSNSDSSDPNLNYPNPHKFDYVDNGGVSGDQLLSSDLRAQSSIAHKRKPLRKQTRLGEGGILEQLPEEEDDDLDYSALKLIKVPKRINHLRNPPPPPLSALMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAVDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFQGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERIPAPKDEAGQRNDLEGRNVATSLQSPPKSQGDGSENANSNEQNGQNKPNYSARSLLKSASISASKCIGVKPRKDLEEEPISETTDEAVDGLSHKVSALHT 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24013113 24018968 + MELO3C017350.2.1 Cme02g01691 321580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01691 645 Gene3D Phosphorylase Kinase; domain 1 170 491 - -
Cme02g01691 645 MobiDBLite consensus disorder prediction 543 558 - -
Cme02g01691 645 SUPERFAMILY Protein kinase-like (PK-like) 150 450 IPR011009 -
Cme02g01691 645 ProSitePatterns Protein kinases ATP-binding region signature. 160 184 IPR017441 GO:0005524
Cme02g01691 645 SMART serkin_6 154 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01691 645 MobiDBLite consensus disorder prediction 524 645 - -
Cme02g01691 645 CDD STKc_TDY_MAPK 153 490 - -
Cme02g01691 645 MobiDBLite consensus disorder prediction 14 43 - -
Cme02g01691 645 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 120 579 - -
Cme02g01691 645 MobiDBLite consensus disorder prediction 560 606 - -
Cme02g01691 645 ProSitePatterns MAP kinase signature. 189 292 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cme02g01691 645 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 120 579 - -
Cme02g01691 645 ProSiteProfiles Protein kinase domain profile. 154 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01691 645 Pfam Protein kinase domain 154 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01691 645 Gene3D Transferase(Phosphotransferase) domain 1 240 468 - -
Cme02g01691 645 MobiDBLite consensus disorder prediction 1 54 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01691 Cme12g01839 CCT
Cme02g01691 Cme12g01839 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00523 Cme-Chr1:3899329 Cme02g01691 Cme-Chr2:24013113 3.32E-55 dispersed
Cme02g01691 Cme-Chr2:24013113 Cme11g01943 Cme-Chr11:27494941 0 dispersed
Cme10g00940 Cme-Chr10:7096653 Cme02g01691 Cme-Chr2:24013113 4.92E-28 dispersed
Cme07g01160 Cme-Chr7:15323843 Cme02g01691 Cme-Chr2:24013113 5.70E-06 transposed
Cme10g01536 Cme-Chr10:19536359 Cme02g01691 Cme-Chr2:24013113 0 transposed
Cme12g01839 Cme-Chr12:24749678 Cme02g01691 Cme-Chr2:24013113 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64702 PF00069 Pkinase 1.80E-68 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01691 - - csv:101219068 1215.29