Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01709 ATGGCAAAGGGAAGTCTTGTTTCCGAGAAAATAAAGCTTCTTCTTGGATTGGTTGTTTTGCAGTTGTGTTATGCAGGATTTCACATTGTGTCAAGAGTTGCTTTAAACATTGGTGTTAGTAAAGTTGTTTATCCGGTGTATCGGAACGCGATCGCTTTAGCTCTATTGGGTCCTTTTGCTTATTTTCTAGAGAAGAATGAAAGGCCACCTCTTACTTTCTCTTTGCTCTTTCAGTTCTTTCTTCTTGCTTTATTGGGGATTACTGCCAATCAAGGATTCTATCTCTTGGGGCTAAACTATGCATCCCCAACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCTATTACCTTTGTGATGGCTTCTGTTCTGAGGCTAGAGCAAGTCAACTTCAGAAGGATAGATGGTTTGGCAAAGATTTTGGGAACCATTGGGAGTGTTGGAGGTGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTCTCCACAACAATTTCCTAACTCAAGGAAGTAATAGCTTAGAGATGGATGACCCTACAATTAAAGTCCAAAATTGGAGATGGGGTTGTATTTACCTGCTAGGCCACTGCCTTTCTTGGGCTGGTTGGATGGTTTTTCAGGGATCTTTATTGAAGAAGTATCCAGCAAAACTAACGTTAACTTCATACACATGCTTCTTTGGTCTGATCCAATTCCTAGTCATAGCTGGCTTTGTGGAAACAGATTATCAATACTGGAAAATCCAATCTGCTGAAGAACTCTTCACAATCTTATATGCTGGTATTGTAGCCTCTGGCATTGTCTTTTCTCTCCAAACATGGTGCATCCACAAAAGTGATCCTGTCTTTGTTGCTGTTTTCCAACCTCTCCAAACTTTCCTAGTAGCCATCATGGCGTTCCTCATCCTCGGCGATCGGTTATTCTCCGGCGGGGTTATTGGTGCTGTTCTTATAACACTTGGGCTTTACTTAGTTTTGTGGGGAAAAAGTAAAGAAAAAGCATTGGAAGAAGAAGATAAGTGTTTGAAACATCCTCTTTTGGATGACCAAAAAGAAGAGAATGTTGTGTTAGACATAGCATGA 1083 41.09 MAKGSLVSEKIKLLLGLVVLQLCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLGPFAYFLEKNERPPLTFSLLFQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFVMASVLRLEQVNFRRIDGLAKILGTIGSVGGATVITLYRGPPLLHNNFLTQGSNSLEMDDPTIKVQNWRWGCIYLLGHCLSWAGWMVFQGSLLKKYPAKLTLTSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGIVASGIVFSLQTWCIHKSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVLITLGLYLVLWGKSKEKALEEEDKCLKHPLLDDQKEENVVLDIA 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24145488 24148385 - MELO3C017334.2.1 Cme02g01709 321598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01709 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 331 - -
Cme02g01709 360 PANTHER WAT1-RELATED PROTEIN 10 335 - -
Cme02g01709 360 PANTHER WAT1-RELATED PROTEIN 10 335 IPR030184 GO:0016021|GO:0022857
Cme02g01709 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Cme02g01709 360 Pfam EamA-like transporter family 17 141 IPR000620 GO:0016020|GO:0016021
Cme02g01709 360 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01709 Cme-Chr2:24145488 Cme04g00502 Cme-Chr4:4070978 5.21E-136 dispersed
Cme08g01728 Cme-Chr8:19777257 Cme02g01709 Cme-Chr2:24145488 2.57E-42 dispersed
Cme02g01709 Cme-Chr2:24145488 Cme03g01914 Cme-Chr3:27258768 1.09E-140 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01709 - - cmo:103494154 694.501