Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g01710 | ATGGCCGATACTGCTAAATCAATTCTCGAAGAGGAGACTTCTAAGTTCGAACCCAAGTCCAAGCGCGGCGCTGATGTCGAAGATGCTGATGTTACTTTGAAGAAGTTTAAAACTGAAGCTGCTGCCGATAAAACTGGCGCTAGGAACTTGGAAGCTGTTAATGGTGATGAGGAACTTAAGGTCATCAAGAGGGAAGTCGAGTTTGTGATTGAAGCGGATGCTGCGGAGGATAAAGGGTCTAGGCATACAATGGAAGATGCCTGGGTTTTGCTCTTGGATGCAAGCTTGGATTTTCCTGGGAAATTGAGATGTGCACATTTTGCTATCTACGATGGACATGGGGGTCGGTTAGCTGCCGAGCACGCTCAAAAGCATTTGCATAAGAACGTTCTCTCATCAGGGTTACCACGTGAGTTGTTGGATGTAAAAGCAACAAAAAAGGCAATACTTGATGGGTTTCGGAAAACAGATGAGTCTCTTCTTCAAGAAAGTTCTGCAGGGGGATGGCAGGATGGTGCTACTGCTGTTTGTGTTTGGGTCTTAGGTCAAACAGTTTTTGTTGCTAATGTTGGTGATGCTAAAGCAGTTGTAGCCCGATCTTTGACTACTGATAAATCAACAAATAACTCTAATGGTGGAAGCTCTTTAAAGGCTATTGTTTTGACAAGGGAACATAAGGCAATCTACCCACAGGAGAGAGCTCGCATACAAAAGGCTGGTGGTGTTGTTGGTTCAAATGGTCGCTTGCAGGGTCGTCTTGAAGTTTCTCGGGCATTTGGAGATCGCCAATTTAAAAAGGATGGTTTGTCCGTAGCATCAATAAGTCGACGTCTTGTGAGGGAAGCAATCCGTGAGCGACGCTGTAAAGATAACTGTACTGCAATTTTTTCTCTCTTGGTGGAAGAATCTCATGATTGGAAAGACAAACAATCAGAACGCAGTGAATTCTTAGGAAAGGGTTAG | 963 | 44.34 | MADTAKSILEEETSKFEPKSKRGADVEDADVTLKKFKTEAAADKTGARNLEAVNGDEELKVIKREVEFVIEADAAEDKGSRHTMEDAWVLLLDASLDFPGKLRCAHFAIYDGHGGRLAAEHAQKHLHKNVLSSGLPRELLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCVWVLGQTVFVANVGDAKAVVARSLTTDKSTNNSNGGSSLKAIVLTREHKAIYPQERARIQKAGGVVGSNGRLQGRLEVSRAFGDRQFKKDGLSVASISRRLVREAIRERRCKDNCTAIFSLLVEESHDWKDKQSERSEFLGKG | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24149666 | 24156236 | - | MELO3C029743.2.1 | Cme02g01710 | 321599 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g01710 | 320 | Gene3D | - | 61 | 275 | IPR036457 | - | |
Cme02g01710 | 320 | SUPERFAMILY | PP2C-like | 66 | 295 | IPR036457 | - | |
Cme02g01710 | 320 | CDD | PP2Cc | 75 | 295 | IPR001932 | - | |
Cme02g01710 | 320 | PANTHER | INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C | 23 | 269 | - | - | |
Cme02g01710 | 320 | SMART | PP2C_4 | 67 | 297 | IPR001932 | - | |
Cme02g01710 | 320 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cme02g01710 | 320 | Pfam | Protein phosphatase 2C | 75 | 268 | IPR001932 | - | |
Cme02g01710 | 320 | ProSiteProfiles | PPM-type phosphatase domain profile. | 71 | 320 | IPR001932 | - | |
Cme02g01710 | 320 | PANTHER | PROTEIN PHOSPHATASE 2C | 23 | 269 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g01710 | Cme-Chr2:24149666 | Cme03g00021 | Cme-Chr3:488587 | 9.89E-24 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g01710 | K17500 | - | csv:101216467 | 538.88 |