Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01772 ATGGATGCTCGCCGTGGCTCCCGCATCGTCAACCCCAAAGTTCGTCAGGTTGGATTCTTCACTCTCGACGCTCCTAATTCCCCCGACCGTTCCCTCTCCGGTCCCCCCAATTGTCTCCCTTCTCAACAATCCCTCTCTCCTCCCACCAATTCATTGTCTCCCGTCATGATTCCCCCTCCCCGTCATCTCTCCGACAATCTTGCATCACGTTCTGCTGTTCTTCCTGTTCCTGCTCCTGCCAATTGGAGGAATTCCACCGATCAGATCCCTGTTGGCAGCTATAACCCTTCCGAGACCCTGCTTGCGACATCCCCTATGGCGTCTCCTTCCAGTAGAACTGGGGATGAAGAGCTCGACATGTCTGAGGATTCTTCCAACTCCGTTTGGCATCGGCGGAGTGGTTCTGGGAAGATTGCCTCGAGCTTTCCTGGGGTTGGAATCCACATGGGGGCTAAGTCGTTGGAGAACTCGCAGGCGGTGGTGCCTCTTCAGACGTTGGAAACTAATAAGCCTGCTGGAGTTGGAGAAAAGACTGGAGGGCCATCCACGGAGGTACAGAATAGACAACCACCACCAAATTCTAAACCCCTGAAGGCAAAAACAACAAAGGCTGAAAGACGAGCTCTACAGGAGGCACAACGAGCTGCAAAAGTCTCTGCAAAAGGTGAGGCAAATAAGTCGGGTGCTGCTTCTGGTAAAGCTGTGAAGCAGCCTGCAGCTATGAAAGATAGCACTGCTGCACCTTCAGTTGCACCTACTGACAAAAGAGGAGGTGATCGCACACTTGACAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGACTGCAGTTTGATGATAAAAGCAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTGTTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTCGTATCGAAGTTTTTTCAACTCGATTCCATTCATCCTGCAGTTTACAAGGTTGGTTTGCAATATATGGCTAGAGACATATGTGGAGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGTCTCTGGGTAGAGATTTAACTGCAAAAATAGGTAGCTATGTGTCGTTCTTCAATGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCGCATTGCCAAATTGCCACTGAATCTTCCGGAATCCGAAGTAAAAGCTACACTTTGCTCAGATATCAATCGCTTTATCAATGAAAAGATCATAATTGCAGATGAGGTCATAGTTAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTTTACTCACATATGGATCATCATCTGCTGTAGAGATGCTTATATTATATGCTCATGAGCTAGGAAAAGAATTCCGCGTTGTGGTGGTGGATTCACGTCCAAAACAAGAAGGGAAAGCATTGCTTCGTAGGCTCATAGCGAGGGGCCTAAATTGCACATACACTCATATAAATGCCATTTCTTACATGATGCACGAAGTAACACGAGTTTTTCTAGGGGCTGCTGCAGTATTATCTAACGGAACTGTTTATTCAAGAGTAGGAACTGCAGCTGTTGCCATGGTTGCTAATGCATTCCATGTTCCAGTTTTAATCTGCTGCGAAGCCTACAAATTTCATGAAAGAGTACAGCTTGACTCAATATGTTTCAACGAATTAGGTGATCCAGATACTATCTCAAAGGTTCCCGAAAGGAAGGATATTAATTATCTAGATGATTTGGCTGCTAAAGAACAACTGCAACTTCTAAATTTAATGTATGACGCTACACCTTCTGATTACATCTCGATGATTGTCACAGATTATGGGATGATCCCACCTACAAGCGTGCCGGTGATTGTGCGAGAGTATCGGAGAGAGCACCTGTGGATATAA 1965 46.06 MDARRGSRIVNPKVRQVGFFTLDAPNSPDRSLSGPPNCLPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVLPVPAPANWRNSTDQIPVGSYNPSETLLATSPMASPSSRTGDEELDMSEDSSNSVWHRRSGSGKIASSFPGVGIHMGAKSLENSQAVVPLQTLETNKPAGVGEKTGGPSTEVQNRQPPPNSKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGAASGKAVKQPAAMKDSTAAPSVAPTDKRGGDRTLDKERKKDAPPPRLQFDDKSRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDSIHPAVYKVGLQYMARDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGSYVSFFNECRPLSVSMGNAIRFLKNRIAKLPLNLPESEVKATLCSDINRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSSAVEMLILYAHELGKEFRVVVVDSRPKQEGKALLRRLIARGLNCTYTHINAISYMMHEVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDTISKVPERKDINYLDDLAAKEQLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24610194 24615291 - MELO3C017281.2.1 Cme02g01772 321661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01772 654 MobiDBLite consensus disorder prediction 160 284 - -
Cme02g01772 654 Gene3D - 440 647 IPR042529 -
Cme02g01772 654 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 654 - -
Cme02g01772 654 MobiDBLite consensus disorder prediction 180 196 - -
Cme02g01772 654 MobiDBLite consensus disorder prediction 81 111 - -
Cme02g01772 654 SUPERFAMILY NagB/RpiA/CoA transferase-like 300 647 IPR037171 -
Cme02g01772 654 MobiDBLite consensus disorder prediction 256 284 - -
Cme02g01772 654 MobiDBLite consensus disorder prediction 77 137 - -
Cme02g01772 654 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 654 - -
Cme02g01772 654 MobiDBLite consensus disorder prediction 21 65 - -
Cme02g01772 654 MobiDBLite consensus disorder prediction 26 51 - -
Cme02g01772 654 Pfam Initiation factor 2 subunit family 346 637 IPR000649 GO:0044237
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01772 Cme-Chr2:24610194 Cme09g01157 Cme-Chr9:16221802 7.20E-19 dispersed
Cme02g01772 Cme-Chr2:24610194 Cme02g01773 Cme-Chr2:24617706 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01772 K03680 - csv:101215104 1260.74