Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01773 ATGGATGCTCGCCGTGGCTCCCGCGTCGTCAACCCCAAAGTCCGTCAGGTCGGATTCTTCACTCTCGACGCTCCCAATCCCCCTGGCCGTTCCCTCTCCGGTCCCGCCGATTGCACCCCTTCTCAACAGTCCCTCTCTCCTCCCTCCAATTCCTTGTCTCCCGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTCGCCTCTCGCTCTGCCGTTTTTCCTCTTCCACCTCCCGCCAATTGGAGGGATTCCGCCGATCATATTCATGTTGGCAGCTATAACCCCTCCGAAATGCTTCTTGCTACTTCTCCTTCTGGTAGAATTGGGGATGAAGAGCTGGATATGTCAGAGGATTCTTCCACCTCCGTTCCGTATCGCCGTAGTGGTTCTGGGAAGATTGCCTCGAGCTTTCCTGGCGTTGGAATCTACATGGCGGCTAAGGCGTCGGAGACTTCACAGGCGATGGTTGTTAACACGGTGGAAGCTAATAAGTCTGTTGGGGTTGCAGAAAAGAATGGGGGGGCTTCCACAGAGGTACAGAATCGTCAGCCACCATCAAATTCAAAACCCCTAAAGGCAAAAACGACAAAGGCTGAAAGACGTGCTCTACAGGAAGCACAACGAGCTGCAAAAGGTTCAGCCAATGGTGAAGTGAAGAAGTCAGGTAACACTCCTGGTAAAGCTGTGAAGCAGTCCTCGACTATGAGAGATAGCACTGCTGCACCTTCGGTGGCATCTACTGACAAAAGAGGAGGTGATCGCACACATGATAAAGAAAGGAAGAAAGATGCTCCACCTCCACGAATGCAGTTTGATGATAAAAGCAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAAGGAACTCAGCTTCCTGATCTCGTGTCAAAGTTTTTCCAACTTGACCCCATTCATCCCGCCATTTACAAGGTTGGTTTACAATATATGGCTGGAGATATATGCGGAGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGTCCCTGGGTAGAGATTTAACCACAAAAATTGGTGGCTATGTATCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAATCTCATTGCCAAATTACCATTGAATCTTCCGGAATCTGAAGTGAAAGCTACACTTTGCTCAGATATTGATCGCTTCATTAATGAAAAGATTATAATTGCAGACGAGGTCATAGTTAGACATGCTGCTACCAAAATCAGGGATGGGGATGTTCTTCTCACATATGGATCGTCATGTTCTGTAGAGATGCTCCTATTATATGCTCATGAGCTTGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGTCCAAAACTAGAAGGGCAAGCATTGCTTCGTAGGCTCATAGGGAGGGGCCTAAGTTGTACATACACTCATATAAATGCTATCTCTTACGTGATGCACAAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGCAGTTGCCATGGTTGCTAATGCATTCCATGTTCCAGTGTTAATCTGCTGCGAAGCCTATAAATTCCACGAAAGGGTTCAGCTTGATTCAATATGTTTCAATGAATTAGGCGATCCAGATGCTATCTCAAAGGTTCAAGGAAGGAAGGATATTAATCATCTAGAAAATTTGGCTGCTAAAGAACAACTGCAATTTCTAAATTTGATGTACGATGCCACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCACCTACAAGTGTGCCGGTGATCGTGCGTGAGTATCGAAGAGAGCACCTGTGGATATAA 1950 46.26 MDARRGSRVVNPKVRQVGFFTLDAPNPPGRSLSGPADCTPSQQSLSPPSNSLSPVMIPPPRHLSDNLASRSAVFPLPPPANWRDSADHIHVGSYNPSEMLLATSPSGRIGDEELDMSEDSSTSVPYRRSGSGKIASSFPGVGIYMAAKASETSQAMVVNTVEANKSVGVAEKNGGASTEVQNRQPPSNSKPLKAKTTKAERRALQEAQRAAKGSANGEVKKSGNTPGKAVKQSSTMRDSTAAPSVASTDKRGGDRTHDKERKKDAPPPRMQFDDKSRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDPIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTTKIGGYVSFFNECRPLSVSMGNAIRFLKNLIAKLPLNLPESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCSVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIGRGLSCTYTHINAISYVMHKVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVQGRKDINHLENLAAKEQLQFLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24617706 24623761 + MELO3C017280.2.1 Cme02g01773 321662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01773 649 MobiDBLite consensus disorder prediction 172 280 - -
Cme02g01773 649 Gene3D - 435 642 IPR042529 -
Cme02g01773 649 MobiDBLite consensus disorder prediction 19 64 - -
Cme02g01773 649 Pfam Initiation factor 2 subunit family 341 632 IPR000649 GO:0044237
Cme02g01773 649 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 649 - -
Cme02g01773 649 SUPERFAMILY NagB/RpiA/CoA transferase-like 295 642 IPR037171 -
Cme02g01773 649 MobiDBLite consensus disorder prediction 175 193 - -
Cme02g01773 649 MobiDBLite consensus disorder prediction 250 280 - -
Cme02g01773 649 MobiDBLite consensus disorder prediction 110 131 - -
Cme02g01773 649 MobiDBLite consensus disorder prediction 35 51 - -
Cme02g01773 649 MobiDBLite consensus disorder prediction 218 246 - -
Cme02g01773 649 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 649 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01773 Cme-Chr2:24617706 Cme09g01157 Cme-Chr9:16221802 1.05E-17 dispersed
Cme02g01772 Cme-Chr2:24610194 Cme02g01773 Cme-Chr2:24617706 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01773 K03680 - csv:101214144 1237.63