Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g01777 | ATGCATATATCAACAATGCCCTTCCTCCACCACACCACCACCTCCTTCGCCTCCTACCATTCCGATCGTCTCCAATCCCTGGGATCGCCGTCGTCATTTTCCGGTTTTGTCTATTCCGTTATTTTATTCCTTTCTCGGACGCCTTTCGGTATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACCAAGATTATCAAAGAGATGTTGCCCCCTGATGTACGGGTTGCAAGAGACGCTCAAGATCTTCTGATTGAGTGTTGTGTGGAGTTTATAAACCTTGTATCATCAGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAACACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGATCGAAACTATGAAACTTCTGCAGCAAGACTCATTGAAAGGAGGAAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAACAAAGAATGTTTGCCGAGGCACGTGCAAGAATGAACGGCAGTAATACTGCACCGAAGCAACCGGAGCCTGAGCAAAGTTTAGAGAGCTAA | 633 | 45.5 | MHISTMPFLHHTTTSFASYHSDRLQSLGSPSSFSGFVYSVILFLSRTPFGMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRIETMKLLQQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24637859 | 24641616 | - | MELO3C017276.2.1 | Cme02g01777 | 321666 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g01777 | 210 | MobiDBLite | consensus disorder prediction | 187 | 210 | - | - | |
Cme02g01777 | 210 | MobiDBLite | consensus disorder prediction | 194 | 210 | - | - | |
Cme02g01777 | 210 | PANTHER | PROTEIN DR1 HOMOLOG | 51 | 209 | IPR044255 | - | |
Cme02g01777 | 210 | Gene3D | Histone, subunit A | 54 | 199 | IPR009072 | GO:0046982 | |
Cme02g01777 | 210 | SUPERFAMILY | Histone-fold | 62 | 196 | IPR009072 | GO:0046982 | |
Cme02g01777 | 210 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 64 | 129 | IPR003958 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g01777 | Cme-Chr2:24637859 | Cme06g02771 | Cme-Chr6:34982615 | 6.14E-17 | dispersed | |
Cme02g01777 | Cme-Chr2:24637859 | Cme10g00818 | Cme-Chr10:5367123 | 1.09E-18 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
40926 | PF00808 | CBFD_NFYB_HMF | 5.10E-22 | CL0012 | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g01777 | K21751 | - | csv:101214627 | 298.13 |