Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01786 CCATTTCCCAACAACCACGCTAACCCCTGCTGGCTGCTGCTCTGCTTTGAACGCCCCCTTTCCTTTGGCGGACTTTCCCACTTTCTTCTTCTTCTTCTTCTATATATACATTCACTCACTCCCCCATTTCCATTTCTCTTCATCAGAACTTCAATGGCTTCTCTTCCTTCCCCACCCACCATGAATCTCCTCAACAAACCCCTCTCTCTTTCCCCACCTCAATCCTTCATTGTCTCAATACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAAACCCCTTCGTTCCCCTACCATTCGCTGTTCTGTTGCTGTGGCTCCTTCTGTTTCCACCAACGTCTCCAAGGAATTCAAGTTGAAGTCCCTCAAGGCCCGTCAGATCATTGACAGTAGAGGCAATCCTACGGTCGAGGTTGATTTGATTACTGACGATCTCTACCGATCCGCTGTTCCTAGTGGGGCTTCTACTGGGATCTATGAGGCGTTGGAGCTTAGAGATGGGGACAAAACTGTTTATGGAGGTAAAGGTGTGCTTACTGCTGTTAAGAATATCAAGGATATCTTGGCTCCTAAGCTCGTTGGCGTCGATGTCAGGAATCAAGAAGAAGTTGATGCAATCATGCTGGAAATTGATGGAACCCCAAACAAGTCGAAACTTGGGGCAAATGCTATATTAGGAGTTTCTTTGAGTGTCTGCAGAGCTGGTGCTGGCGCTAAGGGACTACCACTGTATAGACACATCCAAGAATTATCAGGCACCAAGGAACTTGTTATGCCAGTTCCTGCTTTTAATGTTATAAACGGGGGTAGCCATGCCGGAAATAATCTAGCAATGCAAGAATTTATGATCTTACCTGTAGGTGCTTCATCTTTCGCAGAGGCACTTCGGATGGGAAGTGAAGTTTATCACACACTGAAGGGAATTATTAAAGCAAAATATGGACAAGATGCCTGCAATGTTGGAGATGAGGGTGGATTCGCTCCAAATGTTCAAGATAACAGAGAAGGACTGGTGTTGCTTATTGATGCCATTGAAAAGGCTGGCTATACAGGAAAGATCAAAATAGGAATGGATGTTGCAGCTTCCGAGTTTTTCACTAAAGAGGGAAAATATGATTTGAATTTCAAGAAACAGCCAAATGATGGAGCTCATGTTCACTCGGCTCATGCCCTTGGCGAACTCTATAAACAGTTTGTCAAAGATTTTCCCATTGTTTCCATCGAGGACCCCTTTGATCAAGATGATTGGAGTTCCTGGGCTTCTCTACAATCTTCTGTTGATATCCAACTTGTGGGAGATGATTTGCTGGTAACAAATCCAAAGAGAATTGCCGAAGGCATTCAGAAAAAAGCTTGTAATGCTTTACTTCTGAAGGTTAACCAAATTGGATCAGTGACTGAATCAATTCAGGCTGCTCTTGATTCCAAGGCTGCTGGCTGGGGAGTGATGGTCAGCCACCGAAGTGGTGAAACTGAAGATAATTTTATTGCGGATCTTTCTGTTGGCTTGGCTAGTGGACAGATCAAAACTGGAGCTCCATGCCGAAGCGAACGGTTGGCAAAATATAATCAGCTTCTTCGCATTGAAGAAGAACTTGGCAGTGTTCGATATGCCGGTGCGTCTTTCAGATCACCTTAG 1644 44.71 PFPNNHANPCWLLLCFERPLSFGGLSHFLLLLLLYIHSLTPPFPFLFIRTSMASLPSPPTMNLLNKPLSLSPPQSFIVSIPSSSSSSSSSSSSKPLRSPTIRCSVAVAPSVSTNVSKEFKLKSLKARQIIDSRGNPTVEVDLITDDLYRSAVPSGASTGIYEALELRDGDKTVYGGKGVLTAVKNIKDILAPKLVGVDVRNQEEVDAIMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGLPLYRHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGASSFAEALRMGSEVYHTLKGIIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLIDAIEKAGYTGKIKIGMDVAASEFFTKEGKYDLNFKKQPNDGAHVHSAHALGELYKQFVKDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEGIQKKACNALLLKVNQIGSVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGSVRYAGASFRSP 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24691501 24694936 + MELO3C017268.2.1 Cme02g01786 321675

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01786 547 CDD enolase 123 533 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 Pfam Enolase, C-terminal TIM barrel domain 258 545 IPR020810 -
Cme02g01786 547 SFLD Enolase 122 534 - -
Cme02g01786 547 PANTHER ENOLASE 1, CHLOROPLASTIC 85 547 - -
Cme02g01786 547 SUPERFAMILY Enolase C-terminal domain-like 257 540 IPR036849 -
Cme02g01786 547 Pfam Enolase, N-terminal domain 122 249 IPR020811 -
Cme02g01786 547 ProSitePatterns Enolase signature. 457 470 IPR020809 -
Cme02g01786 547 SMART Enolase_C_3 257 547 IPR020810 -
Cme02g01786 547 TIGRFAM eno: phosphopyruvate hydratase 122 543 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 Hamap Enolase [eno]. 119 534 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 PRINTS Enolase signature 152 166 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 PRINTS Enolase signature 279 292 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 PRINTS Enolase signature 486 503 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 PRINTS Enolase signature 222 238 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 PRINTS Enolase signature 434 445 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 PRINTS Enolase signature 457 471 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 SUPERFAMILY Enolase N-terminal domain-like 121 252 IPR029017 -
Cme02g01786 547 Gene3D - 115 242 IPR029017 -
Cme02g01786 547 SFLD enolase 122 534 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 Gene3D - 243 547 IPR036849 -
Cme02g01786 547 PANTHER ENOLASE 85 547 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cme02g01786 547 SMART Enolase_N_3 121 249 IPR020811 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01786 K01689 ENO, eno; enolase [EC:4.2.1.11] - csv:101209516 905.205
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01786 Cme-Chr2:24691501 Cme08g01229 Cme-Chr8:8736308 3.07E-176 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g393 . . . . . . . . . . . . . Car11g00221 Sed12g2041 . Cpe04g01430 Bhi02g00032 Tan09g1975 Cmetu02g0279 . Hepe09g0308 . . Cla06g01505 Cam06g1660 Cec06g1722 Cco06g1717 Clacu06g1626 Cmu06g1575 Cre06g2385 . . Cone13ag0013 Cone19ag0011 . . . . . . . Bda14g00902 . Bpe15g00556 Bma03g00876 . . . Cmo11g00246 . . . . . . . . . . . . . . . . . . . . Lsi06g01369 Csa01g00309 Chy02g02429 Cme02g01786
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme02g01786 Cme_Chr02 FPKM 0.620464 0.672492 1.915818 1.512204 7.547314 7.254301 7.127705 0.668789 0.547224 0.618935