Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01812 ATGGAAGTTAATACCTATAATCATTCCTTACACAAAATTCTCTTTCAATGGGAATGTTACTCGCCTCGACAGCAAAAGATTGCACTCTTAGCACTTCTTATCTTTACAGCTTTCTATTCAACTGGGGCTTACGATCCGTTGGATCCAAATGGAAACATAACAATTAAATGGGATGTAGTCTCTTGGACGCCAGACGGATATGTTGCTGTGGTGACGATGAACAACTTTCAGATGTACCGACATATCAATTCACCAGGATGGACTCTAGGCTGGTCATGGGCCAAGAAAGAAGTAATATGGTCAATGGTGGGAGCTCAGACAACGGAACAAGGAGATTGTTCCAAGTTCAAAGGAAATGTCCCTCACTGTTGCAAGAAAACCCCAACAGTTGTTGATTTGCTCCCTGGTGTTCCTTATAATCAACAATTCTCCAATTGCTGCAAAGGTGGAGTATTGGCATCCTGGGGACAGGATCCAACAAGTTCGGTCTCTGCCTTTCAGGTGAGTGTTGGGCTAGCCGGCACATCAAACAAAACTGTAAAGTTGCCAAAAAACTTCACACTGCTCGGTCCAGGACCAGGATACACATGTGGACCTGCAAAGGTTGTGCCTTCTACTGTCTTCCTTACTCCTGATCGTCGACGGAAAACTCAAGCACTGATGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCCTCTAAGAACCCAACTTGCTGCGTATCACTCTCCACTTTCTACAATGATACGATCACCTCTTGCCCAACGTGTGCATGTGGCTGTCAGAACAAACATAATTGTATAAAGAGTGACTCAAAGCTATTGCACAAGGAAGGAATAAACACTCCCAAAAAGGATAATACACCTTTACTACAATGCACCCATCACATGTGTCCTGTTAGAGTACACTGGCACGTAAAGATTAATTACAAGGATTACTGGCGTGTGAAGGTTGCTGTAACTAACTTCAACTACAGAATGAACTACACACTGTGGACACTGGCAGTGCAACATCCAAATCTAAACAATGTAACTCAAGTCTTCAGTTTTGACTACAAGCCCCTTGTTCCCTATGAATCCATCAATGACACTGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGGAATGTACAATCTGAAGTACTCATGAAGAAGGACAAGGATACCTTTACCTTCAAGCAGGGTTGGGCCTTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCGTACCCATTTCTACCGAACTCTTCGCCTGTAGGATCTGGTCCAGTTACCAAATTTACCACCTCCTTGATTTTGATACTCTGGTTCATGTGGTGA 1371 43.25 MEVNTYNHSLHKILFQWECYSPRQQKIALLALLIFTAFYSTGAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMNNFQMYRHINSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVLASWGQDPTSSVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNDTITSCPTCACGCQNKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCPVRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSSPVGSGPVTKFTTSLILILWFMW 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24896065 24898655 + MELO3C017243.2.1 Cme02g01812 321701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01812 456 Pfam COBRA-like protein 67 230 IPR006918 GO:0010215|GO:0031225
Cme02g01812 456 PANTHER PROTEIN COBRA 28 453 IPR006918 GO:0010215|GO:0031225
Cme02g01812 456 PIRSF COBRA 18 456 IPR006918 GO:0010215|GO:0031225
Cme02g01812 456 PANTHER COBRA-LIKE PROTEIN 28 453 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01812 Cme-Chr2:24896065 Cme07g01007 Cme-Chr7:11264550 0 dispersed
Cme02g01812 Cme-Chr2:24896065 Cme02g01813 Cme-Chr2:24898747 0 tandem
Cme04g00837 Cme-Chr4:10529127 Cme02g01812 Cme-Chr2:24896065 1.59E-35 transposed
Cme06g01212 Cme-Chr6:9738731 Cme02g01812 Cme-Chr2:24896065 2.80E-156 transposed
Cme06g02279 Cme-Chr6:29983882 Cme02g01812 Cme-Chr2:24896065 3.11E-28 transposed
Cme12g01924 Cme-Chr12:25270241 Cme02g01812 Cme-Chr2:24896065 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01812 - - cmo:103494059 980.319