Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01813 ATGAGGTCTTGGCGCTTCGTTTCCACTGGATCCGTCGCCGACCTTAGTGTCATTGCCGTCTTGTTTCTCTTTCTACTTTCCAGCTTCAGTTTCACTTCAACAGAAGCCTATGACGCTCTTGATCCCAACGGGAACATCACAATCAAGTGGGATGTAATGAGCTGGACTCCAGATGGCTATGTTGCTGTTGTTACAATGTACAACTTCCAGCAATACCGCCATATTCAAGCTCCAGGTTGGACATTAGGGTGGACATGGGCAAAGAAAGAGGTCATCTGGAGCATGATGGGAGGCCAAACAACCGAACAGGGTGACTGCTCAAGATTCAAAGGAAATACTCCTCATTGCTGCAAGAAAGATCCAACTGTTGTGGATTTGTTGCCCGGAACACCTTACAATCAGCAGATTGCAAATTGTTGCAAAGGTGGAGTGATAAACTCATGGGCCCAAGACCCAGCTAATGCAGCAAGTTCGTTTCAAGTCAGTGTTGGTGCTGCAGGAACAAGTAACAAAACGGTCAAACTCCCTAAAAATTTCACGCTTAAAGCACCAGGACCTGGATACACTTGTGGGCCAGCAAAGATTGTGAGGCCAACCAAATTTGTTTCAGGAGATAAAAGAAGAGTAACTCAAGCTTTGATGACTTGGAACGTTACATGCACCTATTCTCAATTCCTGGCTCAGAAGACACCCACCTGTTGTGTTTCCCTCTCTTCCTTCTACAATGATACTATAGTCAACTGCCCAACCTGCACTTGTGGATGTCAAAATAACACGGCGGGTTCTGGGAGCTGTGTGGATCCAGATTCTCCCTATTTGGCTTCAGTTGTATCAGCTCCTGATAAATCAGGTAACAGTGCACCCTTGGTTCAGTGTACCAGCCACATGTGCCCTATTCGAGTCCATTGGCACGTGAAGCTGAATTACAAGGATTACTGGAGAGTGAAGATCACGATCACCAATTTCAATTACCGAATGAACTACACTCTCTGGAATCTGGTGGTGCAACATCCCAATTTTGATAATATCACTAAACTATTCAGCTTTAACTACAAGTCGTTGAGCCCATATGGTGACCTAAGTAAGTTATTTCTGAATATATCTATTCTCATCTCCTTTGATTGGAAAGAATCAGCATTATGCCATTTAGTTTCTCAACTTTATGGTTGGTAA 1173 44.16 MRSWRFVSTGSVADLSVIAVLFLFLLSSFSFTSTEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSRFKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPANAASSFQVSVGAAGTSNKTVKLPKNFTLKAPGPGYTCGPAKIVRPTKFVSGDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNTAGSGSCVDPDSPYLASVVSAPDKSGNSAPLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTLWNLVVQHPNFDNITKLFSFNYKSLSPYGDLSKLFLNISILISFDWKESALCHLVSQLYGW 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24898747 24901932 - MELO3C017242.2.1 Cme02g01813 321702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01813 390 PANTHER COBRA-LIKE PROTEIN 11 361 - -
Cme02g01813 390 PIRSF COBRA 9 370 IPR006918 GO:0010215|GO:0031225
Cme02g01813 390 PANTHER PROTEIN COBRA 11 361 IPR006918 GO:0010215|GO:0031225
Cme02g01813 390 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01813 Cme12g01924 CCT
Cme02g01813 Cme12g01924 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01287 Cme-Chr1:16218110 Cme02g01813 Cme-Chr2:24898747 7.45E-43 dispersed
Cme02g01813 Cme-Chr2:24898747 Cme07g01006 Cme-Chr7:11262888 0 dispersed
Cme02g01812 Cme-Chr2:24896065 Cme02g01813 Cme-Chr2:24898747 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01813 - - csv:101213424 743.806