Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01837 ATGGAGGAAATAACCCTCATCGTCGCCGCCATTATAACATTGGCCTCCGCCTTCCTCCTCCACCGCACTTTCTTCCTCCGCCGTAGATTCCGCCTCCCCCCTGGTCCGAAACCATGGCCGATAGTAGGAAACATGCCGCAGATCGGCGGAGCGCCTCTCCACTCTCTCCTTGCCGCCATGGCCGGAAAGTACGGACCACTGATGTACCTCCGCTTAGGCTCAGTGGACATGGTCGTGGCGGCATCCGCGGCTGTGGCAGAGCAAGTCTTGAAGATTCACGACACTAATTTTCTTAGCCGGCCGCCAAACGCCGGTGCAAAATATATTGCTTATAATTATCAGGATATGGTTTTCGCACCGTACGGTCCACGGTGGCGATTGCTCCGGAAGATCAGCGCCGTCCATCTCTTCTCATCAAAAGCTCTAGATGATCATCGCCGTATACGGCAGGATGAGATATCGGTGCTAGTACAAGCCCTTGCAAGGTCCGGCGAAGCTCCGGCGAACTTGGGGAGCTTGCTCACCGTGTGCATTGCGAACTCCCTTGGACGGACAATGATCGGGCGGCGTGTTTTCGGTGATGGCAGCGGTAGCGACGATTTAGAGTCAAATCAATTTAAGGCAATGGTGGAGCAAGTGATGGTGCTGGCCGGAAAGTTCAACCCCGGCGACTTTTTCCCATGGCTTGAGAGGCTCGATTTGATGGGTGTGGGCAGTGAGATGAAGAAGGTCCATAAATGGTTCGATGATTTTTTGACTAAGATCGTGGAGGAGCATCGGAATTTGTTGGCCAGAGGTGGCGGTGGTAGTGGCGGCGGCGGCCACCAAGACTTGTTGAGTACTCTTCTGTCGATGAAGGATGAAGGTGTAGATGAGAACGAGAAGCTAAATGATACTGAGATCAAGGCTTTGTTGTTGAACATGTTCACAGCTGGAACCGACACGTCAGCAAGCACAGTTGAATGGGCCTTGACAGAGCTCATAAGACATCCCGAAATGATGGCCCAGGCCCAACAAGAACTGGACTCTGTAGTCGGTCGTGATCGGGCAGTTTCCGATCTGGACTTACCTCAACTAGTCTATCTCCAGGCCGTGGTGAAGGAAACTTTCCGGCTCCACCCACCGACGCCGCTCTCCCTCCCTCGCATGGCGTCCGACAGCTGCGAGGTCAACGGATATCACATCCCCAAAGGCTCCACTCTCTTAGTCGACGTATGGGCCATCGGTCGTGACCCAAAAGAATGGGTCGACCCACTCGAGTTCGGGCCCAATCGGTTCCTCCCCGATGGCGAGAAGCCCCACGTGGACGTAAAGGGAAATGATTTTGAGGCGATTCCGTTTGGGGCTGGGCGGAGAATATGTGTGGGTTTGAGTTTGGGCTTGAGGATGGTCCAGATGTTAACAGCTACGATAGTCCATTCATTTGATTGGGCCTTGCCTAATGGGCTTACACCTGATAAATTGAACATGGATGAGCATTATGGGCTTACTCTTCGTCGGGCCCAACCTTTGGTTGTGCATCCACGGCCCAGGTTATTGCTTGGGGTTTATCAAAAATTGCCTTAA 1566 53.32 MEEITLIVAAIITLASAFLLHRTFFLRRRFRLPPGPKPWPIVGNMPQIGGAPLHSLLAAMAGKYGPLMYLRLGSVDMVVAASAAVAEQVLKIHDTNFLSRPPNAGAKYIAYNYQDMVFAPYGPRWRLLRKISAVHLFSSKALDDHRRIRQDEISVLVQALARSGEAPANLGSLLTVCIANSLGRTMIGRRVFGDGSGSDDLESNQFKAMVEQVMVLAGKFNPGDFFPWLERLDLMGVGSEMKKVHKWFDDFLTKIVEEHRNLLARGGGGSGGGGHQDLLSTLLSMKDEGVDENEKLNDTEIKALLLNMFTAGTDTSASTVEWALTELIRHPEMMAQAQQELDSVVGRDRAVSDLDLPQLVYLQAVVKETFRLHPPTPLSLPRMASDSCEVNGYHIPKGSTLLVDVWAIGRDPKEWVDPLEFGPNRFLPDGEKPHVDVKGNDFEAIPFGAGRRICVGLSLGLRMVQMLTATIVHSFDWALPNGLTPDKLNMDEHYGLTLRRAQPLVVHPRPRLLLGVYQKLP 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25076406 25080142 - MELO3C017219.2.1 Cme02g01837 321726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01837 521 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 Gene3D Cytochrome P450 26 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 509 - -
Cme02g01837 521 SUPERFAMILY Cytochrome P450 33 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cme02g01837 521 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g01837 521 PANTHER FLAVONOID 3'-MONOOXYGENASE 10 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01837 Cme-Chr2:25076406 Cme04g01347 Cme-Chr4:18993933 1.94E-134 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01837 K05280 - csv:101207160 927.161