Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01861 ATGGCGCTGTTCAGACGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGTCACTTTCCTGATGCGTCATTCATGGTTTTCAACTTCAGAGAAGGTGGTAGGCGGAGTCAAATATCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTATTGCCATTGGAGATGATTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCACTGGAAGGTCAACAGAATGTGCTGTTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTCTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAATCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCCGATTGGCCTCCATCAGATACGCCTCTAATTTTGGATTGTTTAATACTAAGAGTTCTACCCCTTTTTGATGGGGGAAAAGGATGTAGGCCTGTTGTGCGTATTTACGGTCAAGATCCCTCAGCACCGGCCAATAGAACTTCAAAGCTTTTATTTTCGACACCAATCAAAAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTTCAAGGGGACGTAGTTCTTGAATGCATCCATATGGATGAAGACCTAGTACACGAGGAGATGATGTTTCGAGTTATGTTTCACACAGCATTTGTTAGATCAAACATTGTGATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCGAGGGACCAGTATCCCAAGGACTTCAGAGTTGAGGCGCTCTTTTTGGATGCTGATGCTGTTGTCCCCAATCTCACCGCACCCTTCGATGATGAAGATGGAAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATCTTCAGTAATGTAATGGATGGGCAGGAAGCAAAGGGATCCAATGATCCTCACGTAGTCAATCATGTAAATCGTAAAGAAGAATGGAAGGAGGACTTCGATCCTCCTGCATTCCAAGACTGTGCATCTGACGATGGAAATCTTAAGCATGATAAAAAATCTGATTTTGATGCAGTGAAGGACATCACTGTGGATGATGTGAAGTACAAACTGAATGAAAATATATATCCTGATCTTAATGCAGTTAAGGACATTGCCGTGGATGATGGGGAAATGAATTCGAATTCCTTCTTGGTAGCTACTAATGTCCCAACTCATGTGAAAGTCCAGGGGTTGGTGGATGATGCATATGAGAAATTTGAAGATATGGAAAAAAAGGATGACCGAAGAGATACTTCACCTGAGAAATTGGAAAACAAGGTTCTGCAGAAGAAGTTGAGTGCTGATGGTTCTAGACAAAAGTCAGAAAAATTGCAAACACCGATTCCCAAGAAACAGCCTGTTTCAAGTGGAAAACCGACCAATGATACGGGTTTAACCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTCTCTGCAAAACAAGCAAAGCCAAATGCAGTTTCTAGATGGATCCCTCCTAACAAAGGCTCTTATACGAATTCTATGCATGTTTCCTATCCACCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCAAGTATTGCATCATCAAAGGATGTAAATGCAAATTCCAAAACGAAGGCCACTGCCACCCTTGATTCTCTGGTTTCTTCAGATGTTTTTACTGAACGAAAAAACTATAAAGTGGATTCTGTGAGGCCTTCTCACTCCGCACCTGCGAACCTTATGCATGGCCCATCATCTCCAGTTGAGTCAATTGGTGAGACGCCTTCTTCCTCTGAAACTTTAAAGCCTTCAGATAGTGATGCACAACTTGAAGTACCACCATCGCCCCCCGTGCCCACAAAGCCACCTCCACCTTCTCCTCCTCCTCCTCCTCCACCTCCACCTTCTCCACCACCCACTTCATTTCATCATATAGGGACAACATACTCTGCTCTTCCACTTTCTGTGTCTTTAGCACCACCACCCATTCTTAACTCACCAAAGGCAGTGAATACCCCTCCCCCTCCCCCTCCATCCAGTAGGCTGAATAGTGTTTTTCCCCATTCTTCAACTCAACCATCATGGGAGAAAATATATTCTTCTGTTGACACTGGTACGGTGACTGGTTCTATACCTCTACCTTCTTCTGTGGGCATGCCATCTACCTTAAAGAATATTGCTAGTACTTCTCTTCTTGCCTCGTCACTTAAAGAGATATCATTATCACTACCACCTCCCCCACCTTCTATGAAACATGAAGCACATATTCCACCCCCTCCACCACCCCCACCCCCATTAATGCATGATGCATTTCCTTCACCATCTCTAACGAAAACAGCACCCCCACCCCCACCACCTCCACCCCCACCCATGTATGGTGCGTCTCCAACACCATCTTTATTACATCGAGCACCATCTTCAACGCATAGAGCCTCACCTCCGCCACCTCCTCCCCCACCACCTTTCATGCATGGAGCTCCATCTCCACCTCCTCCTCCTCCCCCACCTTCCATAGGGGCAAATGCTCCACCTGACCCAAGAGGTTTGTCTTCTGGGAGAGGGCGTGGGCTATCACGCTCGACAGCTACAGCACCTCGAAGGTCCTCCTTGAAACCTCTACATTGGAGTAAAGTAACAAGGGCTCTGCAAGGAAGCTTATGGGAAGAACTACAGAGATATGGCGAGCCTCAAATTGCACCAGAGTTTGATGTCTCCGAGTTAGAGACTCTCTTTTCTGCAACTGTCCCCAAACCTGCTGAAAAATCTGGAGGCCGAAGGAAGTCTGTTGGATCTAAAACTGACAAAGTTCACCTGATTGACCTCAGGAGGGCTAATAACACTGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTAGCTATGGATGAGTCAGTTTTAGATGTTGATCAGGTGGAAAATCTCATAAAATTTTGTCCTACCAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGACATGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTCGAGTCAAAGATGAGAGTGTTTTCTTTTAAGATACAATTTGGCTCTCAGATAGTAGAATTTAAGAAGAGTTTAAATACTGTCAACTCTGCATGTGATGAGGTTAGGAATTCTACCAAATTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACATTAAATCAAGGAACAGCAAGGGGTTCTGCAGTTGGCTTCAAGTTGGATAGTCTTTTAAAACTTGCTGATACACGTGCTTCTAATAATAAGATGACGCTCATGCATTATCTTTGCAAGGTCCTTGCTTCGAAGACACCGGCTCTTCTGAATTTTCATCTGGACCTGGGTAGCCTCGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCTATAATCAAGGGGTTGGAAAAGGTCAGGCAGGAGCTTGTTGCTTCTGAAAGTGATGGCCCGGTCTCTGAAGTTTTTCGCAAGACGCTGAAAGAATTTATTGCTATTGCTGAGACAGAGGTGGCATCGGTGACAAATCTTTACTCTACTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCGGCTCGTTGTCCATTTGAGCAGGTTACAGTGACACTATTGAACTTTGTGAGACTATTTCGGAAAGCCCACGAAGAAAACTGCAAACAGGCCGAATTGGAAAAGAAAAAGGCCGAGAAGGAAGCCGAAATGGAGAATGCCAAAGGAATCAGCCTTACGAAAAAGAGTGTGAAATAG 4038 44.28 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGGRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPSDTPLILDCLILRVLPLFDGGKGCRPVVRIYGQDPSAPANRTSKLLFSTPIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHMDEDLVHEEMMFRVMFHTAFVRSNIVMLNRDEVDVLWDARDQYPKDFRVEALFLDADAVVPNLTAPFDDEDGNETGAASPEEFFEVEEIFSNVMDGQEAKGSNDPHVVNHVNRKEEWKEDFDPPAFQDCASDDGNLKHDKKSDFDAVKDITVDDVKYKLNENIYPDLNAVKDIAVDDGEMNSNSFLVATNVPTHVKVQGLVDDAYEKFEDMEKKDDRRDTSPEKLENKVLQKKLSADGSRQKSEKLQTPIPKKQPVSSGKPTNDTGLTKQKVKQQETQGFSAKQAKPNAVSRWIPPNKGSYTNSMHVSYPPSRYNSAPAALASIASSKDVNANSKTKATATLDSLVSSDVFTERKNYKVDSVRPSHSAPANLMHGPSSPVESIGETPSSSETLKPSDSDAQLEVPPSPPVPTKPPPPSPPPPPPPPPSPPPTSFHHIGTTYSALPLSVSLAPPPILNSPKAVNTPPPPPPSSRLNSVFPHSSTQPSWEKIYSSVDTGTVTGSIPLPSSVGMPSTLKNIASTSLLASSLKEISLSLPPPPPSMKHEAHIPPPPPPPPPLMHDAFPSPSLTKTAPPPPPPPPPPMYGASPTPSLLHRAPSSTHRASPPPPPPPPPFMHGAPSPPPPPPPPSIGANAPPDPRGLSSGRGRGLSRSTATAPRRSSLKPLHWSKVTRALQGSLWEELQRYGEPQIAPEFDVSELETLFSATVPKPAEKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDMDNLGKCEQYFLELMKVPRVESKMRVFSFKIQFGSQIVEFKKSLNTVNSACDEVRNSTKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVRQELVASESDGPVSEVFRKTLKEFIAIAETEVASVTNLYSTVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKQAELEKKKAEKEAEMENAKGISLTKKSVK 1345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25245447 25260426 + MELO3C017195.2.1 Cme02g01861 321750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01861 1345 MobiDBLite consensus disorder prediction 1319 1345 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 884 917 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 524 568 - -
Cme02g01861 1345 PANTHER FORMIN-J 803 1338 - -
Cme02g01861 1345 PANTHER FORMIN-J 1 764 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 1319 1335 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 493 580 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 664 680 - -
Cme02g01861 1345 Pfam Formin Homology 2 Domain 940 1307 IPR015425 -
Cme02g01861 1345 Gene3D - 206 336 - -
Cme02g01861 1345 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Cme02g01861 1345 CDD PTP_PTEN-like 16 190 - -
Cme02g01861 1345 Coils Coil 1308 1337 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 685 716 - -
Cme02g01861 1345 Coils Coil 1214 1234 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 816 870 - -
Cme02g01861 1345 ProSiteProfiles Formin homology-2 (FH2) domain profile. 935 1333 IPR015425 -
Cme02g01861 1345 SUPERFAMILY Formin homology 2 domain (FH2 domain) 948 1327 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 741 757 - -
Cme02g01861 1345 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 814 946 - -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 493 523 - -
Cme02g01861 1345 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cme02g01861 1345 SMART PTEN_C2_2 198 338 IPR014020 -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 610 768 - -
Cme02g01861 1345 SMART it6_source 934 1343 IPR015425 -
Cme02g01861 1345 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Cme02g01861 1345 Gene3D Formin, FH2 domain 933 1319 IPR042201 -
Cme02g01861 1345 MobiDBLite consensus disorder prediction 610 634 - -
Cme02g01861 1345 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01861 Cme12g01971 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01861 Cme-Chr2:25245447 Cme07g00118 Cme-Chr7:785333 0 dispersed
Cme08g00594 Cme-Chr8:3786333 Cme02g01861 Cme-Chr2:25245447 7.11E-07 dispersed
Cme12g01971 Cme-Chr12:25543931 Cme02g01861 Cme-Chr2:25245447 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01861 - - cmo:103494331 1643.25