Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01884 ATGGACCCTTCATGGAGGCATAAGTGTGAGATAATGTCCTTTGAAGATCACTCATATCATTTTTCATGCAATCTTTCGCCAATCCATTTTAGATCAAGCTACAACAATAGTTATTCAGGGTTGGATTGGAACTACACCAATTTTGGGTTACAAGACAACATTTTTGAAGACCCTTTTTTGGACCCTAAAGATATTGTGCCTATTAACACCTATATATCAGAAGATGGGGTTGGGATTTGGAATGGAATGGATGATGGGGTATTTGAGGTTGTTGAGGAAGAGCCATTGTTATTGCTAGAATGTGGAGAAAATGAGGAAAAGGAAGAGATGGTGGTGCATAATAAGAAGGGGAAAAAAAGATCAAAGTGTTTGAAATCAGAAAATGTATGTAGCAACAACAGTAATAATGGGAGCTGTTATTCATCGTCAAAAATGTTGTCAAAGAAAGTAATATCTGAGTATTTCTATATGCCGATAACTCGAGCTGCTAAAGAGCTTAATGTGGGACTTACTCTTTTGAAGAAGAGATGTAGAGAATTGGGTATAAGAAGATGGCCTCATAGGAAGTTGATGAGCATACAAACCCTAATCAAGAATGTCAAGGAGATTGAAAAGGGAGATGAAGAGGAAGGAAATGGGTCAGAGAATTGTAAGTTGAAGAATGTATTGGAAATATTAGAGAATGAGAAGAAACTAATGGAGGAGAGACCAGATTTGCAATTGGAAGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAAGCCAATTACAAGAAAAGAAAGCTCTCTGGATTAATCATCAATAATAATAGTAACAACAACAACAACATTGATGATATAAATTCCCAAAATTATTTCTCATCCTCAACCACTACCATTGATAATCAAGATGATCATGATGATTATGATGAAGAAATGAAGTATCTCTTGTCTGATTGCTCCTTTTCTTCAACTAATTGCATGTTCATGTAA 972 35.6 MDPSWRHKCEIMSFEDHSYHFSCNLSPIHFRSSYNNSYSGLDWNYTNFGLQDNIFEDPFLDPKDIVPINTYISEDGVGIWNGMDDGVFEVVEEEPLLLLECGENEEKEEMVVHNKKGKKRSKCLKSENVCSNNSNNGSCYSSSKMLSKKVISEYFYMPITRAAKELNVGLTLLKKRCRELGIRRWPHRKLMSIQTLIKNVKEIEKGDEEEGNGSENCKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGLIINNNSNNNNNIDDINSQNYFSSSTTTIDNQDDHDDYDEEMKYLLSDCSFSSTNCMFM 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25372623 25373898 - MELO3C017174.2.1 Cme02g01884 321773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01884 323 Pfam RWP-RK domain 146 193 IPR003035 -
Cme02g01884 323 ProSiteProfiles RWP-RK domain profile. 126 215 IPR003035 -
Cme02g01884 323 PANTHER PROTEIN RKD1-RELATED 16 275 - -
Cme02g01884 323 PANTHER PROTEIN RKD4 16 275 IPR044607 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01884 Cme-Chr2:25372623 Cme06g01149 Cme-Chr6:8857091 3.19E-32 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40937 PF02042 RWP-RK 2.40E-20 No_clan Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01884 - - cmo:103494325 567.77