Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01914 ATGGAATTGGAATCAGATACTTCCGGCTTAAACAACAAATGGGTATCAACAGTCGCTAGCGTATGGATTCAATGCACCAGTGGATCTCTTTACACTTTCTCCATCTACTCCCAAACCCTCAAATCAACTCAGGGATACGATCAATCCACTTTGGATATTGTTTCTGTTTTTAAAGACATCGGTGTCAATTGTGGTGTCCTTGCGGGATTTCTCTACTACTTTGCCACCACCCATGGTGGTCGTCCTGGTCCGTGGATTGTTCACTTCGCCGGTGCGATTCAGTGCTTCTTGGGGTACTTTTTTATCTGGGCTGCCGTTTATGGGGTCTTCCATCGGCCGCCGGTTCCCGTTATGTGCCTTTTCATGTTGGTGGCTGCTCATGCTCAGAGCTTCTTCAACACGGCTAACGTTGTCACTGGGGTTCGAAATTTCCCCCGTTATAGTGGGACGATTGTTGGAATCATGAAGGGGTTTCTTGGTTTGAGTGGAGCAATATTGATTCAAATATACGAGACAATATTTAATGGACAACCTACTTCGTTTCTTCTAATGCTGGCGCTGCTACCAACCCTTAATTCCTTATTGTGTATGTGGTTCGTGAGAATTCACCATGTTGATGATGGAATTGAAAAAGAGCATCTGAATACCTTATCCATAATTACTCTGGTCATTGCTACTTACCTTATGATCAAGATAGTTCTAGAGCATATTTTCACCTTCCAATTCCCTCTACATGTCGCTACATTTATTCTACTTTTGATGTTGCTTGCATCTCCTCTATATATTGCAATTAGAGCCCAACAGAGAGAGTCCAGAAGGACTTTGCACCCTTCTTTCGCAGAGAGTGACCAGCTGATTGGTCGTCACAATCGAGAGACTTTGGATTTTGACCATGAACGGGGAAGGGAATCTGAAGAAAGCCTGACTCTCATTCAAGCTTTATACACAATAGACTTTTGGATATTGTTTTTTGCAACTGCTTGTGGCATGGGAACAGGGTTAGCTACAGTGAATAATATGAGTCAGATAGGGTTATCTCTCGGTTACACAAGCTCGGAGATAAACACTTTGGTTTCCTTGTGGAGCATTTGGAATTTTTTTGGTCGTTTTGGAGCTGGGTATGTGTCGGATTATTATCTGCATGCCAAAGGATGGGCTAGGCCATTGTTCATGTTCATCACTCTAACGACCATGAGCATTGGACATGTAGTGATTGCCTCGGGCCTGCCTGGTGCTCTCTTTGCTGGTTCAATAGTAGTGGGTGTTTGTTATGGGTCTCAGTGGTCACTAATGCCAACAATTACTTCTGAAATATTTGGTGTTCTACACATGGGTACTATATTCAATGCCATAACAGTAGCAAGCCCTGTTGGATCTTATTTATTTTCAGTAAGAGTTGTTGGGTATATATATGACAAGGAAGCATCAAGTGAAGGAGATGCTTGTATTGGAACTTACTGCTTCATGTTGTCATTTTTTATTATGGCTTTTGCCACTCTCTTGGGCTCTTTCGCAGCCCTTGGCTTATTTTTCTGGAGAAGAAGTTTCTACGATCAAGTTGTTATCAGAAGGCTGCAGCACCCATCAAATGGATAA 1596 42.73 MELESDTSGLNNKWVSTVASVWIQCTSGSLYTFSIYSQTLKSTQGYDQSTLDIVSVFKDIGVNCGVLAGFLYYFATTHGGRPGPWIVHFAGAIQCFLGYFFIWAAVYGVFHRPPVPVMCLFMLVAAHAQSFFNTANVVTGVRNFPRYSGTIVGIMKGFLGLSGAILIQIYETIFNGQPTSFLLMLALLPTLNSLLCMWFVRIHHVDDGIEKEHLNTLSIITLVIATYLMIKIVLEHIFTFQFPLHVATFILLLMLLASPLYIAIRAQQRESRRTLHPSFAESDQLIGRHNRETLDFDHERGRESEESLTLIQALYTIDFWILFFATACGMGTGLATVNNMSQIGLSLGYTSSEINTLVSLWSIWNFFGRFGAGYVSDYYLHAKGWARPLFMFITLTTMSIGHVVIASGLPGALFAGSIVVGVCYGSQWSLMPTITSEIFGVLHMGTIFNAITVASPVGSYLFSVRVVGYIYDKEASSEGDACIGTYCFMLSFFIMAFATLLGSFAALGLFFWRRSFYDQVVIRRLQHPSNG 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25572403 25576350 + MELO3C017145.2.1 Cme02g01914 321803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01914 531 Pfam Nodulin-like 13 264 IPR010658 -
Cme02g01914 531 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 10 527 - -
Cme02g01914 531 Gene3D MFS general substrate transporter like domains 214 507 IPR036259 -
Cme02g01914 531 CDD MFS_Mch1p_like 13 502 - -
Cme02g01914 531 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 527 - -
Cme02g01914 531 SUPERFAMILY MFS general substrate transporter 12 202 IPR036259 -
Cme02g01914 531 SUPERFAMILY MFS general substrate transporter 219 514 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01914 Cme-Chr2:25572403 Cme08g01273 Cme-Chr8:9204775 2.15E-114 dispersed
Cme07g02031 Cme-Chr7:25322006 Cme02g01914 Cme-Chr2:25572403 1.17E-73 dispersed
Cme02g01913 Cme-Chr2:25569274 Cme02g01914 Cme-Chr2:25572403 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01914 - - csv:101216552 1033.48