Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01936 ATGGCGATTTCCATTCCCACCCGGCAGCTATTCATCGACGGCGAGTGGAGGGAACCAGTTCTCAAGAAACGCATCCCCGTCATCAACCCCACTACTGAAGAAACAATCGGATCTATTCCTGCTGCTACTGCTGAGGATGTAGAGTTAGCTGTTGATGCTGCTAGAAAAGCGCTGGCGAGGAATAAAGGCAAAGATTGGTCCTCTGCTTCGGGGGCTGTTCGTGCCAAGTATTTGCGTGCTATTGCTGCCAAGATAACAGAGAGGAAACCGGAATTAGCAAAGCTTGAATCAATAGACTGTGGAAAACCTCTGGAAGAAGCTGCATGGGACATGGATGATGTTGCTGGGTGCTTCGATTACTATGCCAATCTTGCTGAAGGATTGGATGCAAAGCAAAAAGCTCCTGTTTCTCTTCCCATGGATACATTCAAGAGCTATGTTCTAAAAGAACCCATTGGAGTTGTTGGGTTGATTACTCCCTGGAACTATCCTCTATTGATGTGTGCATGGAAAGTTGCACCTGCCTTGGCTGCTGGATGTGCTGCAATTCTGAAGCCATCAGAACTGGCATCTGTCACATCTTTGGAACTGGCCGAAATATGTAAAGAAGTTGGTCTTCCATCTGGAATTTTGAATGTTCTGACAGGATATGGGGCTGAAGCTGGTGCTCCTCTAGCATCTCATCCTCATGTTGACAAGATTGCATTCACTGGGAGTGGTGCTACTGGAAGCAAGATTATGGCATCAGCTGCCCAACTTGTCAAGCCTGTTACCATGGAACTTGGTGGAAAAAGTCCGATTGTTGTTTTTGATGATGTTGATCTTGACAAGGCTGCCGAATGGACAATATTTGGTTGCTTTTGGACAAATGGTCAGATTTGCAGTGCCACATCCCGTCTACTTGTACACGAAAACATTGCTGATGAATTCTTGGATAAGATCGTGCAATGGTGCAAGAACATTAAGATTTCAGATCCTTTAGAAGAAGGTTGCAGACTTGGCCCTGTTGTTAGTGCATCTCAGTACGAGAAAGTATTGAAGTTTGTCTCAACTGCTGAGCAAGAAGGTGCAAAGATTCTATATGGTGGAGTTCGCCCTAAGCACCTAAAGAAGGGATACTTCGTTGAACCAGCAATTATTACTAATGTTACAACCTCCATGCAAATATGGAAAGAAGAAGTCTTTGGACCTGTTCTATGTGTGAAGACTTTTAGTTCTGAAGATGAAGCTATTGAATTAGCAAACGATACAATATATGGCTTAGGTGCTGCTGTAATATCAAATGATTTAGAAAGGTGTGATCGTGTAGCCAAGGCTTTTCAGGCAGGAATTGTGTGGATTAATTGCTCGCAACCATGCTTCACTCAAGCCCCATGGGGAGGCGTCAAACGGAGTGGCTTTGGTCGAGAGCTAGGGGAATGGGGACTTGATACTTATCTGACTGTAAAGCAGGTTACTCAATACATATCCGATGAACCATGGGGATGGTACAAATCTCCTTCTAAACTGTAA 1512 44.51 MAISIPTRQLFIDGEWREPVLKKRIPVINPTTEETIGSIPAATAEDVELAVDAARKALARNKGKDWSSASGAVRAKYLRAIAAKITERKPELAKLESIDCGKPLEEAAWDMDDVAGCFDYYANLAEGLDAKQKAPVSLPMDTFKSYVLKEPIGVVGLITPWNYPLLMCAWKVAPALAAGCAAILKPSELASVTSLELAEICKEVGLPSGILNVLTGYGAEAGAPLASHPHVDKIAFTGSGATGSKIMASAAQLVKPVTMELGGKSPIVVFDDVDLDKAAEWTIFGCFWTNGQICSATSRLLVHENIADEFLDKIVQWCKNIKISDPLEEGCRLGPVVSASQYEKVLKFVSTAEQEGAKILYGGVRPKHLKKGYFVEPAIITNVTTSMQIWKEEVFGPVLCVKTFSSEDEAIELANDTIYGLGAAVISNDLERCDRVAKAFQAGIVWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDTYLTVKQVTQYISDEPWGWYKSPSKL 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25707686 25712675 - MELO3C017125.2.1 Cme02g01936 321825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01936 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Cme02g01936 503 Pfam Aldehyde dehydrogenase family 16 485 IPR015590 GO:0016491
Cme02g01936 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Cme02g01936 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 1 500 - -
Cme02g01936 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 500 - -
Cme02g01936 503 SUPERFAMILY ALDH-like 4 489 IPR016161 GO:0016491
Cme02g01936 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Cme02g01936 503 CDD ALDH_F10_BADH 27 487 - -
Cme02g01936 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01936 Cme-Chr2:25707686 Cme02g01959 Cme-Chr2:25859064 1.28E-119 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01936 K00130 - csv:101213657 991.49