Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01942 ATGTGGGTCTTTTTAGTTCATTGCAATCTTCGCCAATTCCATCGCATCGTCTTGTGTCTGTATGTCTTGTGGCCTCCTATGTTGTCGCAGAAAAGAAACCCAGATGATGGAGATGGTTCGGCGGATGGTGATAATCCCGATGATAAGCGTAGAAAGTTTTGTTTTATGAGTGTGGTTCGTGATGCCATATCATTGCAATCAATGCAACAGCTATTGGAGCCAGTCATTCGTAAAGTGGTGAGGGAGGAGGTTGAATTGGCACTAGGAAAGTACATTACCAATGTGCAAAGGAATGATGAGAATGACGCAAAAGAAATCTATTCTTCTGGGCCAAGATGCTTTCAATTGAAGTTCGTAACTGATATTTCTCTCCCGGTATTTACTGGATCACGCATTGAAGGAAGAGATAGTTCCAATTTGATGGTGGCTTTGGTTGACACCTTAACTGGGGAAGTTGTTGGCGCTGGGCCTCAATCCTCTGCCAAGGTGGAAATTGTAGTGCTTGAGGGTGATTTTGAGGGTGGAGGTGATAATTACACCGTAGAGGAGTTTAGGAATAACATTGTAAGAGAGAGGGAAGGAAAGAAACCACTTCTAACAGGAGAGACACTTGTGAGTCTGAAAGATGGGATTGGTTTGGTAGGTGAGATTTCTTTCACCGACAATTCAAGCTGGACTAGAAGCCGTCGGTTCAGGCTCGGTGCAAGAATTACAGACGACAATGATGGAACGAGAATACTTGAAGCAAAGACTGCATCATTTGTTGTCAGAGATCACCGTGGAGAATTGTACAAGAAGCACCACCCTCCAACTCTGCAGGATGAAGTATGGAGATTGCAGAAAATTAGCAAGGATGGAGCCTATCATAAGCGCCTGAGCCAAGCAAAAATTGAGACGGTGCAAGATTTCCTAACTCATCTTTATGTACAACCTTCAAGGCTTCGCAATATTCTTGGCCCTGGTATGTCTACCAAAATGTGGGAAGCTACAATTGAGCATGCACAGACATGTGTGCTCGATAAGAAGATTTATGTGTACAAACCTCACGATTTGGAACAGAAAAGCGGAGTGGTCTTTAATGTTGTAGGACGAGTGATGGGGCTACTTTCAGATTACCAGTACGTTCCCATAGATAAGCTATCTGAAAGTGAAAAGGCTGATGCTCACAACTTGGTTATCTCTGCATACAAACACTGGGAAGAAGTGGACTCCATTGATGATGAAACTACTCTTGTAGGTGGCTCTTCTCACCCACTTAGTTTTGTTTACACCCCGAGCTCACCCATGGAGGACCATTCTTATGGTAGCAAGTACTTGTCTTCTCCAAAATTTAGTGGCTTTGATTTCCCACCATCAAATGCCTATTCTTCAGACATAATTTCATCGATGGGTTCTACTGGGAATCCTTGCGGCTTGGACGATCATGCTTTGCAGGGTTTCGGTTCTATGGTTGTAAGATATGATCCGATGCCAAGTTCCCCAAATTTTGCCAACTCTTCTCTGATCTGCGATTCCGAGCCACTACACTCATCTTTCTTTGACGTGGATCATACGCAAGTTCTTGAGTCCGATGTGCAATGTAGCTCGATTTTAGAATCACGAGTGACAACAACTACTCTTCAAGGTGGCTCCTCATCGTGTGTTGCTCAAATGAGATGGGCTAAGGTATATGGTGCGCTAAAATGGTTCTTTTTGTTGAGATTGGTAATCAGGAGGAGAAACAAACATGGGTTCAAGAGATACAAAGGTGTACAGGGTCGTGGAAAGGAAAAATTGGACTATGGTTGA 1788 43.62 MWVFLVHCNLRQFHRIVLCLYVLWPPMLSQKRNPDDGDGSADGDNPDDKRRKFCFMSVVRDAISLQSMQQLLEPVIRKVVREEVELALGKYITNVQRNDENDAKEIYSSGPRCFQLKFVTDISLPVFTGSRIEGRDSSNLMVALVDTLTGEVVGAGPQSSAKVEIVVLEGDFEGGGDNYTVEEFRNNIVREREGKKPLLTGETLVSLKDGIGLVGEISFTDNSSWTRSRRFRLGARITDDNDGTRILEAKTASFVVRDHRGELYKKHHPPTLQDEVWRLQKISKDGAYHKRLSQAKIETVQDFLTHLYVQPSRLRNILGPGMSTKMWEATIEHAQTCVLDKKIYVYKPHDLEQKSGVVFNVVGRVMGLLSDYQYVPIDKLSESEKADAHNLVISAYKHWEEVDSIDDETTLVGGSSHPLSFVYTPSSPMEDHSYGSKYLSSPKFSGFDFPPSNAYSSDIISSMGSTGNPCGLDDHALQGFGSMVVRYDPMPSSPNFANSSLICDSEPLHSSFFDVDHTQVLESDVQCSSILESRVTTTTLQGGSSSCVAQMRWAKVYGALKWFFLLRLVIRRRNKHGFKRYKGVQGRGKEKLDYG 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25746744 25752841 + MELO3C017117.2.1 Cme02g01942 321831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01942 595 Pfam Calmodulin binding protein C-terminal domain 342 403 IPR046829 -
Cme02g01942 595 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
Cme02g01942 595 PANTHER CALMODULIN-BINDING PROTEIN 60 A 30 573 - -
Cme02g01942 595 Pfam Calmodulin binding protein central domain 272 337 IPR046830 -
Cme02g01942 595 PANTHER OS02G0177800 PROTEIN 30 573 IPR012416 GO:0005516
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01542 Cme-Chr2:22492672 Cme02g01942 Cme-Chr2:25746744 7.51E-111 dispersed
Cme02g01942 Cme-Chr2:25746744 Cme12g01866 Cme-Chr12:24886995 4.51E-69 dispersed
Cme02g01942 Cme-Chr2:25746744 Cme05g01572 Cme-Chr5:24967705 8.95E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01942 - - csv:101211405 1150.96