Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01988 ATGACATCAAGTATGTTGAGCGGAGAAAGAAGGTGGACATCAGCCAGACGAGGTGGGATGACTGTTTTAGGAAAGGTTGCTGTTCCAAAACCTATTAACTTACCCAGTCAAAGGTTAGAAAACCATGGTTTGGACCCAAATGTGGAAATTGTACCCAAGGGTACCCTCAGTTGGGGCAATAAATCAACTTCATCTGCAACAAATGCATGGGGTTCTTCATCCGTTTCTCCAAATACAGATAGTGCTTCTGGTTCGCCAAGCCATCTCTGTGGTCGCCCTTCATCTGCTGGAGGTGGCACTCGTCCATCAACAGCTGGGAGTGACAGGTCCCATGAACCTCATGCTAATGCATGGGGACCAAGTTCTAGACCATCGTCTGCCTCTGGGCCCGTGACATTAAACCATGCAACACTCACATCCTTGCGCCCTCACAGTGCCGAAACTAAATCTAGTAGCTCACAGTTGTCACGATTTGCAGAAACTTCTGAAAATCCAGTGGCTTGGAATTCTGCTGTTACTACAGAGAAAGTGGGAACGATGGCATGTAAGAGTGATGGGTTTTCTTTGACATCTGGAGATTTTCCTACTCTGGGTTCAGAGAAAGAATGTGTAGGAAAGGATGCTGAGTCACAAGATAATGGGTCTAATGGAGGAGCTACAATGAAAGAGAGGACTGGAACTTCAGCAATTGATGATCCTAAAAATATGACTACAAGTGTTGCAAGTGCTAATTCCTGGAGAAGTGATAATCTTCCACACAATGATGATGGATCTAGGCCAAATGTAGAGAAATGGCTGGGGCATCCCCAGCCTTACCCTGGTGCAAATATTCCTCCCCCACATTATGATGCCTGGCATGGTTCTCCAGTAAACAATCCTCAAGGTGGTGTATGGTATAGAGGTCCTCCACAAGGAGGTCCTCCATATAGAACTCCAGTTGCTCCTGGTAATTTCCCTATGGATCCATTTCTGTATTACCCTCCACAGATTCCTCCTGGTGGTCTTCCCAATCCTCAGCCTCCTCATGGAACTGGACCCATGGGACATCATCCTAAAACTGGAGATATATACAGACCTCCTATGCATGATGGTTTTATTCACCCTGGCATGCCAATTAGACCAGGATTTTACCCAGGTCCAGTTTCCTATGACGGGTATTATCGACCTCCCATGGGCTACTGCAATTCAAACGATAGAGATGCACCATTTATGGGAATGCCTGCTGGGCCTGCTGGACCTGCTGTTTACAACAGGTTCTCGGGCCAAGGCCAGAGTCCCTCCGAGCCTGTGAGTTCCCATGGTGTATCCGGTGGAAAGGGGGGTATGGTTCCAGAACAAGTAGAATCTGGTCTTCCTTGTGATAATCAAGGACCATACAAGGTTCTTCTGAAGCAGCAGGGAAACAATGGTAAGAACGATGAAAAAGATAGGATAAACTCAACAACCACCAATCAGTTGATTCTTGAGAAGGCTGACCAACAGAGAGTGTCTTCATGGGAGAATGACTGGGATCACAAAAAGGAAGTTGATTTGAGAAGGAGAAAATTGGGGGTGGAACCGTATTCTCAGGCTTCTGCCAACCAAGAAGCTCAGTCTTCTGAAAGTATGAAAGCCAAGTCTCATGGAAACACGGGTACTGGTGATGGTTTACTAGAAAAGGCGGATGCTGCTGCTTCTGGTTTCTCTGAAGTTCCCAAATCACTGCCTACTTCCACAAAAGGTTCAAGTCTGATTCAGAAGATAGAGGGATTAAATGCAAAAGCACGGGCTTCTGACGTGCGACATGATGCTGCACCTATTTTTAGAAGGGAGGAGCCAGCTGAGTTTCAACCTGATGATAAGCACTCTGATCGTGTTGTTGCCCATGAAGCAGGCGTGGGTGCTGTTCTTCCTGAAAACAGAGATTTTAATGAAGTCATAGACCCTGCCTCCAGTGAATTACGCTTATCCACTGTGGATAGGAACGTTAAATTACACAGTGGAGGACCCGTCCACAGGAGGCCGAATCGTGGAGTGCAAGGGAGAAGTGATCATCATGGCCGTGGAAAAGCCAATTCCCAGGAGGTTGATGGGTGGCATAAAAAACCTCTGTTGGACTCCCCAGGCATGATGGCAACTCCCAACAAGGAAAGTTCGGTGCTTGCAAGAGACCACAATGCTTTAGGAGCTTTGAATAAGGCCAAGCCATTTTCTTCGGATAGCCATGGAGATGGACCTGCCCCATCCACGGGTGATTCAAAAGATAGTCAAGCTCAGCGTACAAAGATGAGAGAGCTAGCAAAGCAACGCACCAAACAATTGCAGGAGGAAGAGGAGGAAAGGACTAGGAAACAGAAGGCTAGGGCCTTGGCAAAGCTTGAAGAGTTGAACAGACGTACAGTATCTGGGGAGGGGCCAAATCAGGGGTCTGAAGCTGATAATGATGCTGTAAGAAATAAGATAGAAGAACCTCACAGAATGCTTGGAGATACATCATCGAAGAAACCAAGTAGTGGCAATGAGGAGCAGGCTGTGACACATACTGAATTGAGATCTTTGGAGCAGGAGCTAAGCATTTCTGATGGAGCTCAAAACAAGAATGCTTCTGAAGTGAATGGGGGTGGTGCATCCTTGAAGCACAAGCGTACAGGAAATAAACAAAAACCAAATATTTCATCTGAAAAGACTGAAAAGATTCCCCACTTAATAAAGGAATCAAAAGGTCAGATAGTTGCAGCTGACATTCATACAGTTGTAGAGGAGTCCAGCAATATCATTACAGATTCTATTGCCGAACCTTCAACTCATGCAAGAAAGAAAAATAACAAGAGTGGGAAGAACAGACACAAAGTGGAAGAGGCCTTGATATCTGCACCATCACCTCAGATCTCGAAAGAAGCAAATCTTACAACGGAATATGATAAACCAAAGGCTTCTCAATCTGTATTGGATCCACCTTCTGATCCACAACCGCCAATTAATAGGGATGAAAATCAGTTCAGAGAGCTGCTACCCCAGTTGCCAGTTGTAGAGACACTTGGCAGAGGTAATGGTCAGTGGAAGTCCCAGCATTCTCGCAGGGTGGCAAGAAATGCTCAAAATAGACCAGGAGAAAAGATTAATGGTAGTGATTCTGTTATGTGGGCCCCCGTGAGATCTCTCAACAAATGTGAGGTTACTGATGAAACTGTTCCGAAGAACGAAGCAGAGTCCGTTGCTTCATCTGTGAAGATTGATAATCAAGTGCAGAATATTCCAAAAAATAAGCGAGCTGAAAGGGAGATATATGTACCGAAGCCAGTAGCCAAAGAAATGGCACAACAAGGAACTATCCATCAAGATACTTCCATAATAAACCAGGCACCAGACGATAATAAGGCAGATTCAAGTTCTCAAAGTTCTGATAATGCTAGATCTGCTGGTGCTGTTTCGGGAAATGTGGGATTTTCCACAGATCACAGGAACGGGGATGGTAGGCAACATAAACAAAGCAAGGCACATTCATCGTGGCAGCGACGGGGAGCAATGGAACATGGGCAAGGCTTGCAAGATCAGCTATCTTATGCTTCAAATGCTGGTAGTTATGTCCAAAAAACAAATGAATATCAATTACCTGAGAAGGCCACCGGAAGCTCCACTAATGCGTTCGTGAGTCAAGTTGATGAGTGGGATCCACCAGATGGATGGAATGATCCCAACTACTCGGCCTCTATCCCACCTGTCACTGCAGCTGTTGGAAGAGACCAGGGAGTGACAGGCAGAGGAAAACGGTCTCAATCTAAGGGGCACAAGGGCGTAGGGAACAATTATGATCTAAATGAAAAGAAACATAGAGGTGGAGACAACGAAAAGATTTCTTCCGAATTCGAAGTGCTTGAGGCAGATCAGAAAGATGTATCTGCTGCTGCCAAAGAAAATAGGGGTGTTGGAGAACGTTCAACATCTCATTGGCAACCCAAATCGCGGATGGTCCAGCCTCACAATCACCAAAATGTTGAGTCTGAAGGTGCACAGACTAATAAAATCGGATCTAGGCAATTCTCACATCGCACAAAAGCAACTGATGATGTAGCCCAGAACCAGTATGATACCTCTGGTGCAAGAACCATCACAGAAGAGGGATCAAATGTTGGTCATCATGGAGCCAGGGGAGAGAAGAAAGTTTCTTCCCGCAAGGAGCGTCCTTACTCCCCAAACCAAGGTCCTATCCATACACTTGAGGCTGCTCCAGCAAATACAGATGTCAGGCGTGAGCAACAGATGCCTACATTTTACCATAAAGGCGGCGAGAACAATAACCGTTATGGAAGAGGGTCAGACTCCCGTCGGGAAAGGAATACCTCTCAGCATCATAAGCAGCAGCAGCAGCAGCAGCAGCATTATCCACCTGCTAATAGAGACAGGCAAAGACAAAATCAGCAGTACGAGTACCAACCAGTTGGGCCACACAATAATAAACCGAACATGGATAGACCTAAGGATACCACTCAACATTCAGGCTCAAGGTACGTGGAGAGGGGCCAACAAGGTCAGTCCAGAAGAGATGGTGGGAACTTTTACAAGCAACAAGGAGGACCAGTTTGA 4563 46.07 MTSSMLSGERRWTSARRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGNKSTSSATNAWGSSSVSPNTDSASGSPSHLCGRPSSAGGGTRPSTAGSDRSHEPHANAWGPSSRPSSASGPVTLNHATLTSLRPHSAETKSSSSQLSRFAETSENPVAWNSAVTTEKVGTMACKSDGFSLTSGDFPTLGSEKECVGKDAESQDNGSNGGATMKERTGTSAIDDPKNMTTSVASANSWRSDNLPHNDDGSRPNVEKWLGHPQPYPGANIPPPHYDAWHGSPVNNPQGGVWYRGPPQGGPPYRTPVAPGNFPMDPFLYYPPQIPPGGLPNPQPPHGTGPMGHHPKTGDIYRPPMHDGFIHPGMPIRPGFYPGPVSYDGYYRPPMGYCNSNDRDAPFMGMPAGPAGPAVYNRFSGQGQSPSEPVSSHGVSGGKGGMVPEQVESGLPCDNQGPYKVLLKQQGNNGKNDEKDRINSTTTNQLILEKADQQRVSSWENDWDHKKEVDLRRRKLGVEPYSQASANQEAQSSESMKAKSHGNTGTGDGLLEKADAAASGFSEVPKSLPTSTKGSSLIQKIEGLNAKARASDVRHDAAPIFRREEPAEFQPDDKHSDRVVAHEAGVGAVLPENRDFNEVIDPASSELRLSTVDRNVKLHSGGPVHRRPNRGVQGRSDHHGRGKANSQEVDGWHKKPLLDSPGMMATPNKESSVLARDHNALGALNKAKPFSSDSHGDGPAPSTGDSKDSQAQRTKMRELAKQRTKQLQEEEEERTRKQKARALAKLEELNRRTVSGEGPNQGSEADNDAVRNKIEEPHRMLGDTSSKKPSSGNEEQAVTHTELRSLEQELSISDGAQNKNASEVNGGGASLKHKRTGNKQKPNISSEKTEKIPHLIKESKGQIVAADIHTVVEESSNIITDSIAEPSTHARKKNNKSGKNRHKVEEALISAPSPQISKEANLTTEYDKPKASQSVLDPPSDPQPPINRDENQFRELLPQLPVVETLGRGNGQWKSQHSRRVARNAQNRPGEKINGSDSVMWAPVRSLNKCEVTDETVPKNEAESVASSVKIDNQVQNIPKNKRAEREIYVPKPVAKEMAQQGTIHQDTSIINQAPDDNKADSSSQSSDNARSAGAVSGNVGFSTDHRNGDGRQHKQSKAHSSWQRRGAMEHGQGLQDQLSYASNAGSYVQKTNEYQLPEKATGSSTNAFVSQVDEWDPPDGWNDPNYSASIPPVTAAVGRDQGVTGRGKRSQSKGHKGVGNNYDLNEKKHRGGDNEKISSEFEVLEADQKDVSAAAKENRGVGERSTSHWQPKSRMVQPHNHQNVESEGAQTNKIGSRQFSHRTKATDDVAQNQYDTSGARTITEEGSNVGHHGARGEKKVSSRKERPYSPNQGPIHTLEAAPANTDVRREQQMPTFYHKGGENNNRYGRGSDSRRERNTSQHHKQQQQQQQHYPPANRDRQRQNQQYEYQPVGPHNNKPNMDRPKDTTQHSGSRYVERGQQGQSRRDGGNFYKQQGGPV 1520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26143349 26152960 - MELO3C026283.2.1 Cme02g01988 321877

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1101 1146 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 670 695 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 186 259 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1007 1039 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1292 1520 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1494 1511 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 230 251 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 954 970 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 824 865 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1429 1443 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 56 90 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 521 542 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 418 486 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 418 432 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1193 1212 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1444 1474 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 914 991 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 808 823 - -
Cme02g01988 1520 PANTHER PROTEIN MODIFIER OF SNC1 1 1 1515 IPR038808 -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1305 1365 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1261 1278 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 119 163 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 587 616 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1075 1179 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1009 1033 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 750 792 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 333 354 - -
Cme02g01988 1520 Pfam BAT2 N-terminus 13 132 IPR009738 -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 54 163 - -
Cme02g01988 1520 PANTHER PROTEIN MODIFIER OF SNC1 1 1 1515 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1193 1278 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 518 616 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 880 897 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 1371 1386 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 653 898 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 564 579 - -
Cme02g01988 1520 Coils Coil 753 792 - -
Cme02g01988 1520 MobiDBLite consensus disorder prediction 209 223 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01988 - - - csv:101207575 2818.49
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g781 . . . . . . . . . . Cma10g00119 Cma11g00088 Car10g00106 Car11g00079 Sed08g0103 . Cpe04g01566 Bhi02g00478 Tan09g2266 Cmetu02g1512 . Hepe09g0213 . . Cla06g01673 Cam06g1861 Cec06g1911 Cco06g1916 Clacu06g1817 Cmu06g1758 Cre06g2575 . . . . . . . . . Blo15g00262 . . Bpe07g00848 . . . . Cmo10g00123 Cmo11g00088 . . . . . Cpe18g00849 . . . . . . . . . . . . . . Lsi06g01564 Csa01g00136 Chy02g02591 Cme02g01988
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006102 0 1 1 0 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 5 1 1 39