Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02010 ATGGTTGCTGATATGGAACCACGGCATCAACGCCGACCTCTGTTACAGTTACTTCAGCTTTGTATCTTCTTCCTCTTCTTTTTTTCTTCTTATGCAGTCGATTTCCTCTTCAATTCTTTCTCAAACGAATCAAATGGCACTGATTTCATTCTCATTAGCGACGCCAGATTCGATTCCCCTGTAATCCGCCTCAACAACGACTCAAACCAAAATTCAATCGGTCGAGTTTTCTACCACACAAAGCTAATTATGAAACCCACTTCGAATTCCTCAACGATTTCTTCTTTTTCAACTTCATTTGTGTTCTCGATCTTGCTGGAAGTCGCTACTAGTCCAGGCTTCGGTTTGGCCTTCGTTCTTTCCAATTCTACTTCCCCTCCCGGCGTCATCGCCGGCCAATACTTCGGTCTCTTCACTAATTCCACAACCCACGTGGTTGCTCCACTTCTCGCCGTCGAATTCGACACCGGCCGAAACACAGAGTTCAACGACCCAGATGATAGTCACATCGGAATCGATTTGAACAGTGTGTTGTCGAGTAAAATACACGGCGCTGGGTATTTTGATTCTAATGGGCAATTTATTCCGATTCAGATGAGAAATGGGCAAAACCTTCGCGCTTGGATCGAATTCGATGGGGCAAATTTCGAAATTAATGTCACAATTGCTCCAATTGGAATTCCTCGTCCTTCGATACCCACTTTGAGTTTTAGAGATCCTTTGATTGCGAATTATGTATCGACTGAAATGTTTGTGGGATTTTCAGCATCGAAGACAAAATGGGTTGAGGCGCAAAGGATTTTAGCTTGGAGTTTTAGTGACACTGGGGTTGCTAGAGACATTAACACCACAAATTTCCCCGTGTTTATGAGAGAATCACCACCATCTCCTTTGTCGCCAGGATCTGTTGCCGGTATTGTAATTGGCTGTGTTCTGTTTGTGATCATAGTTTCTGGATTTGGGTTTTTTTGGTACTGGCGAAAGAACAGAGCAAAAGAAGAAGATGATGAAATTGAGGACTGGGAACTTGAATATTGGCCTCATAGATTCTCCAACGAGGAGCTTTCACAAGCTACTGATAAATTTTCCGATGAAAATCTGTTGGGATACGGCGGATTTGGAAAGGTATTCAAAGGAACTTTACCAAACCACACGGAAATCGCCGTTAAATGTGTAAATCACGATTCAAAACAGGGGTTAAAGGAATTCATGGCAGAAATCTCAAGTATGGGTAGGCTTCAACATAAGAATCTAGTTCAAATGCGAGGATGGTGCCGAAAAAAAAATGAATTAATGTTGGTTTATGATTATATGCCGAATGGAAGTCTTAACCGGTGGATATTTGACAAACCCACAACGCTACTCAGCTGGAAGCAGCGCCGCCGTGTACTCGCCGACGTTGCAGAAGGTTTGAACTATCTCCATCATGGTTGGGATCAGGTGGTGATTCACAGAGACATAAAATCGAGCAACGTGTTGTTAGATTCAGAAATGAGAGGCAGAGTCGGCGATTTTGGGCTGGCGAAGTTATACCAACACGGCGAAACTCCGAACACCACTCGAGTTGTTGGGACTTTGGGGTATTTGGCGCCGGAGATTGCGACGGTGGCTACTCCAACAGCGGCTAGCGATGTTTATAGTTTTGGGGTTGTGGTTCTTGAAGTTGTGTGTGGGCGACGGCCGATTGAGTTGGCGGCGGAGGAAGAAGAAATGGTGCTCATTGATTGGGTGAGAGATCTTTACTCTGCCGGCCGGTTGATTGCGGCGGCGGACTCGAGAATCAGAGAGGAGTATGAGGTTGAAGAGATTGAATTGATGTTGAAGCTTGGTTTAGCTTGTTGTCATCCGAACCCTGAACGCCGGCCCACAATGAGAGAGGTGGTGGCAGTTTTGATCGGAGAACAACCATCAGAGGAGTCGGTTGAGCTTTTATCGGGATTGGCCAGTGGCATGGTTGACGACACTCAAGATGTTGATATGTGA 1983 45.18 MVADMEPRHQRRPLLQLLQLCIFFLFFFSSYAVDFLFNSFSNESNGTDFILISDARFDSPVIRLNNDSNQNSIGRVFYHTKLIMKPTSNSSTISSFSTSFVFSILLEVATSPGFGLAFVLSNSTSPPGVIAGQYFGLFTNSTTHVVAPLLAVEFDTGRNTEFNDPDDSHIGIDLNSVLSSKIHGAGYFDSNGQFIPIQMRNGQNLRAWIEFDGANFEINVTIAPIGIPRPSIPTLSFRDPLIANYVSTEMFVGFSASKTKWVEAQRILAWSFSDTGVARDINTTNFPVFMRESPPSPLSPGSVAGIVIGCVLFVIIVSGFGFFWYWRKNRAKEEDDEIEDWELEYWPHRFSNEELSQATDKFSDENLLGYGGFGKVFKGTLPNHTEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKKNELMLVYDYMPNGSLNRWIFDKPTTLLSWKQRRRVLADVAEGLNYLHHGWDQVVIHRDIKSSNVLLDSEMRGRVGDFGLAKLYQHGETPNTTRVVGTLGYLAPEIATVATPTAASDVYSFGVVVLEVVCGRRPIELAAEEEEMVLIDWVRDLYSAGRLIAAADSRIREEYEVEEIELMLKLGLACCHPNPERRPTMREVVAVLIGEQPSEESVELLSGLASGMVDDTQDVDM 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26316302 26318389 - MELO3C026261.2.1 Cme02g02010 321899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02010 660 SUPERFAMILY Protein kinase-like (PK-like) 340 631 IPR011009 -
Cme02g02010 660 Gene3D - 31 288 - -
Cme02g02010 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Cme02g02010 660 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 17 650 - -
Cme02g02010 660 CDD lectin_legume_LecRK_Arcelin_ConA 33 276 IPR001220 GO:0030246
Cme02g02010 660 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g02010 660 ProSitePatterns Legume lectins beta-chain signature. 150 156 IPR019825 -
Cme02g02010 660 Pfam Legume lectin domain 33 285 IPR001220 GO:0030246
Cme02g02010 660 Pfam Protein kinase domain 363 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g02010 660 Gene3D Phosphorylase Kinase; domain 1 325 437 - -
Cme02g02010 660 Gene3D Transferase(Phosphotransferase) domain 1 438 644 - -
Cme02g02010 660 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Cme02g02010 660 SMART serkin_6 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g02010 660 CDD STKc_IRAK 368 631 - -
Cme02g02010 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 291 IPR013320 -
Cme02g02010 660 PANTHER - 17 650 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02010 Cme-Chr2:26316302 Cme04g02645 Cme-Chr4:32188876 2.34E-168 dispersed
Cme02g02010 Cme-Chr2:26316302 Cme04g02643 Cme-Chr4:32182873 1.68E-173 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64712 PF00069 Pkinase 2.40E-52 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02010 - - cmo:103502376 1266.91