Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02011 ATGAACACTTTGCTTCCTCTTCTTCTTCTTCCTTCTCATCTTCAACTGTCACTTTATTCAATTTCCTTCACTACTTTCATTCTCCTCCTCATCTTCCTTCTCCAAAAATGCCTTCGCTCCTCTCCACAATCTTCACCTCCATCTCCACCAAAGCTTCCAATCTTCGGCCATCTTCTCAATCTCGGCTCCCTTCCCCATCTCACTCTCCAAAACTACGCTCGTCTTCATGGTCCTCTGTTTCTCCTCCGCCTCGGCTCTGTTCCCACACTCGTCGTTTCTGCCTCCGATCTTGCTCGCGATATCATGAAAACCCACGATCTCGTCTTTGCAAACAGACCCAAATCAAGCATCAGCGACAAACTGCTCTACAGCTCCAGAGACGTCGCCGCTTCCCCTTATGGTGAGTACTGGCGACAGATGAAAAGCATTTGCGTTCTTCATCTGTTGAGCAACAAAAGGGTTCAATCCTTTCGTCATGTAAGAGAAGAAGAGGTTAAATTGATGATTGAGAAGATTGAGCAGAACCCAGTTGGGGTGAATTTGACTGAGATTTTCTCTGGATTGACGAACGATGTGGTCTGCAGAGTGGCTTTAGGGAGAAAATACAGAGTGGGAGAAGATGGAGTGAAGTTCATGGGTTTGTTAAAGGAATTTTCGAAATTATTGGGAAGTTTTAGTGTACGAGATTTCATTCCTTGGTTGGGTTGGATCGATTGGATTTCTGGGTTGGATGGTAAAGCAAACGGAGTAGCGAAAGAGTTGGATAAGTTCTTTGACAGAGTGATTGAAGATCATATGAATCCAGAAAACAGAGCTGACATGAAGAATTTTGATGAGCAAAAGGATTTGGTTGATGTTTTGCTTTGGATACAAAGAGAAAACTCCATTGGTTTCCCCCTTGAGATGAAGAACATCAAAGCTCTAATCTTGGACATGTTTGCAGCAGGGACAGACACAGCTTACACGGTATTGGAATGGGCAATGTCAGAATTATTGAAACACCCAGAAGTAATGAAGAAACTGAAGAATGAAATCGGAGAAATAAAAGGTGAACACAAAGGAAGCTATATAAATGAGGATGATATAGACCAAATGGTATATCTTAAGGCAATAATCAAAGAAACATTACGACTACACACACCCATCCCTCTTCTCGTCCCAAGAGAATCAATCAAACCTGTAAAACTAAGAGGGTACGATATTAAACCTGGAACTCGAGTTATGATCAATGCATGGACAATCGGGAGAGACCCAAAAGTATGGGAAGAAGCAGAGAAATTTCAACCAGAAAGATTCTTGAACAGTTCAATAGATTTCAAGGGTCAAGATTTTGAGTTGATCCCATTTGGTGCAGGAAGAAGAGGATGTCCTGGAATTGCGTTTGCAACTACGGTTATTGAGATAGCTTTAGCAAATTTAGTGCATAAGTTCGAGTGGATTTTGCCTAACGGTGAGGATTTGGACATGAGTGGAGCCTCTGGGTTAACCATTCATAGAAAGATTCCACTTGTGGCTACAGCAGTTCCTTGTTAG 1533 42.34 MNTLLPLLLLPSHLQLSLYSISFTTFILLLIFLLQKCLRSSPQSSPPSPPKLPIFGHLLNLGSLPHLTLQNYARLHGPLFLLRLGSVPTLVVSASDLARDIMKTHDLVFANRPKSSISDKLLYSSRDVAASPYGEYWRQMKSICVLHLLSNKRVQSFRHVREEEVKLMIEKIEQNPVGVNLTEIFSGLTNDVVCRVALGRKYRVGEDGVKFMGLLKEFSKLLGSFSVRDFIPWLGWIDWISGLDGKANGVAKELDKFFDRVIEDHMNPENRADMKNFDEQKDLVDVLLWIQRENSIGFPLEMKNIKALILDMFAAGTDTAYTVLEWAMSELLKHPEVMKKLKNEIGEIKGEHKGSYINEDDIDQMVYLKAIIKETLRLHTPIPLLVPRESIKPVKLRGYDIKPGTRVMINAWTIGRDPKVWEEAEKFQPERFLNSSIDFKGQDFELIPFGAGRRGCPGIAFATTVIEIALANLVHKFEWILPNGEDLDMSGASGLTIHRKIPLVATAVPC 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26320246 26322426 - MELO3C026260.2.1 Cme02g02011 321900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02011 510 Pfam Cytochrome P450 46 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cme02g02011 510 PANTHER CYTOCHROME P450 71B11-RELATED 23 507 - -
Cme02g02011 510 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PANTHER CYTOCHROME P450 71A21-RELATED 23 507 - -
Cme02g02011 510 Gene3D Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 SUPERFAMILY Cytochrome P450 46 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02011 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02011 Cme-Chr2:26320246 Cme12g01644 Cme-Chr12:23559875 2.35E-159 dispersed
Cme11g01682 Cme-Chr11:24892758 Cme02g02011 Cme-Chr2:26320246 1.43E-73 transposed
Cme12g01642 Cme-Chr12:23549666 Cme02g02011 Cme-Chr2:26320246 2.95E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02011 - - cmo:103502374 983.015