Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02015 ATGGAAGCTGGGAGTAGATTTTACTCTGCTACAGATGAGTTCAGATTGGAAGCCAAATGGTTGGTTGATCCCAAACATCTATTTGTTGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAATATAAGAACCAGACTGTTGCTATCAAAATTGTTCATAAAGGGGAAACAGTTGATGAGGTTGCAAAGAAAGAGGCTCGGTTTGCTCGAGAGGTTGCAATGTTGTCTAGAGTACAACATAAAAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACCGAACTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAATATGCGCCCACGGTGCTTGGACACACGTGTGGCAGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGCCTTCACTCACATGGCATCATACACCGTGATTTGAAGCCTGAGAACCTTCTGTTGACAGCAGATCACAAAACAGTTAAATTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCGTTGACGGAGATGATGACTGCAGAGACGGGAACTTACCGTTGGATGGCTCCAGAGTTGTACAGCACTGTTACCCTAAGGCAAGGGGAGAAGAAACACTACAACCATAAAGTGGATGCCTATAGCTTTGCTATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCAGCATATGCAGCTGCTTTTAAGAATGTAAGGCCTAGCGCAGAGAATCTTCCCGAGGAACTGGCTATCATTCTAACATCATGCTGGCAAGAGGATGCAAATGCTCGTCCAAATTTCTCCCAAATTATCCAAATGTTACTTAATTACCTTTATACTATTTCACCCCCTGAACCGGTGATTCCTTCCCGAATTTTCACTTCTGAGAACACGGTTTTTCCCCCTGAATCTCCCGGAACAAGCTCGCTGATGGCAGTCCGTGACGATTCAGGGGACACTCCGAAAGCTAAAATGGAAAATAATCCCAGAGAAATGAACCCACTTACCGGTTTGGTATGCTCCAAGCATAGCGCAAGAATAGAGAACACTGACCATCGTTACCTCGTTTGGATCTACATTTCCCTTCTGCATCTCATGGAACAGATTAAGAGCTTCTTTACATCGATCAGCTTGAGCATACCCCGAGATCATTGCACTCCAAGCAACAACATCTCTTTTATCCATTTCATTGAACAACTTTCGAGCGGTATCAATGCGACCACATTTGGCATACATATCAATCAGCGAAGTTATTAG 1296 43.83 MEAGSRFYSATDEFRLEAKWLVDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETVDEVAKKEARFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTRVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELAIILTSCWQEDANARPNFSQIIQMLLNYLYTISPPEPVIPSRIFTSENTVFPPESPGTSSLMAVRDDSGDTPKAKMENNPREMNPLTGLVCSKHSARIENTDHRYLVWIYISLLHLMEQIKSFFTSISLSIPRDHCTPSNNISFIHFIEQLSSGINATTFGIHINQRSY 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26338340 26343533 - MELO3C026256.2.1 Cme02g02015 321904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02015 431 ProSitePatterns Protein kinases ATP-binding region signature. 33 54 IPR017441 GO:0005524
Cme02g02015 431 Pfam Protein tyrosine and serine/threonine kinase 31 287 IPR001245 GO:0004672|GO:0006468
Cme02g02015 431 CDD STKc_MAP3K-like 33 287 - -
Cme02g02015 431 MobiDBLite consensus disorder prediction 315 344 - -
Cme02g02015 431 SUPERFAMILY Protein kinase-like (PK-like) 19 316 IPR011009 -
Cme02g02015 431 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 329 - -
Cme02g02015 431 Gene3D Phosphorylase Kinase; domain 1 15 106 - -
Cme02g02015 431 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672|GO:0006468
Cme02g02015 431 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672|GO:0006468
Cme02g02015 431 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Cme02g02015 431 PRINTS Tyrosine kinase catalytic domain signature 215 237 IPR001245 GO:0004672|GO:0006468
Cme02g02015 431 Gene3D Transferase(Phosphotransferase) domain 1 108 295 - -
Cme02g02015 431 PANTHER SERINE-THREONINE PROTEIN KINASE 1 329 - -
Cme02g02015 431 ProSiteProfiles Protein kinase domain profile. 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g02015 431 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g02015 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02015 Cme-Chr2:26338340 Cme09g00431 Cme-Chr9:4118767 1.21E-175 dispersed
Cme02g02015 Cme-Chr2:26338340 Cme04g01834 Cme-Chr4:26066055 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64713 PF07714 PK_Tyr_Ser-Thr 2.00E-57 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02015 - - csv:101223021 686.797