Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02039 AGAGGCAAAAGTCGGTATAATTCGCGGCTACAATTCGAATTTCCAAAACCCCAATCGGGCCATAGTGACAGGTTGTTTCGAAGCTTGCAAATTAGCAGTGCAATGAAGAAGAAAGAAACAGCAAGCACCATAATTCTTCTTTCATTTTTACTTTCTCTTCAAGAACTTCTTCATTTTGCTTTCCCTTTACCTCCTTCACACAACAATCAGGACGAGGAGCAATCTGCGACTTTGAGACCTCTTGAGCAAAACGAAGAGCATGTTGATGAGGTTCATTGTTCCAGAGAAAGAAGCAGGACAGCCTGGAATATTATTGAGGAGCATTTACTGCCTTTTATGGAGATAGAAAATTATGAGGTTTCCACCCAGTGTAGGCTTCATCCAAACAATGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAATGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTCGATAAGCATTTTGACAACAGACACAGCAATCTTCTGAATGTTAGCCACGGGAAGTGCTTGGCTGATTTATGTGGGGCATTACATTGTGACCTAAAGATGGATATCAAGTCTCGTAAATCTAAATGCAAGCCTGCAGCTGCTGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATAGCTGTTTTCCAATTAATGAGGGACCATCAGCAAACCGTCTTCATGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGGGAAACAAAAGCCATTTTCTAGAGGAGCAGCGAGGCAACCAGGCATATTCTACATGGCATCTTCAATACTGATTTTGATGCTGCTACCAATTTTCTATGTCATTGTCTATTTACACCGCAGAGAATCAAGAAATGGAATCGAAGTGCTGAAACGAATCTCAAAAGCTGGACGTAAAAGCAAACCCTTGTAA 945 40.95 RGKSRYNSRLQFEFPKPQSGHSDRLFRSLQISSAMKKKETASTIILLSFLLSLQELLHFAFPLPPSHNNQDEEQSATLRPLEQNEEHVDEVHCSRERSRTAWNIIEEHLLPFMEIENYEVSTQCRLHPNNDLFRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHSNLLNVSHGKCLADLCGALHCDLKMDIKSRKSKCKPAAAARNKHLCESLADSCFPINEGPSANRLHELFLHQFCGAHSCTGKQKPFSRGAARQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLKRISKAGRKSKPL 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26444385 26449898 - MELO3C026232.2.1 Cme02g02039 321928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02039 314 ProSiteProfiles Zinc finger C2H2 type domain profile. 148 173 IPR013087 -
Cme02g02039 314 ProSitePatterns Zinc finger C2H2 type domain signature. 150 171 IPR013087 -
Cme02g02039 314 PANTHER ZINC FINGER PROTEIN-RELATED 40 313 - -
Cme02g02039 314 MobiDBLite consensus disorder prediction 1 21 - -
Cme02g02039 314 MobiDBLite consensus disorder prediction 68 92 - -
Cme02g02039 314 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 40 313 - -
Cme02g02039 314 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02039 Cme-Chr2:26444385 Cme06g01857 Cme-Chr6:21888048 3.99E-107 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40957 None None None None Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02039 - - csv:101218367 552.747