Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02052 ATGGCGAGAGTGAACGATAATTGGGAGAGGCTAGTGCGTGCGACTTTGAAGAGAGAGCAGCTTAGAAATGCAGGGCAAGGCCATGGGAGGACTCCCAGTGGGATTGTGGGAGCCGTGCCGCCTTCTCTTGGAAAAACTACCAACATTGATGCTATTTTGCAGGCTGCAGATGAAATCCAAGCGGAGGACTCCACTGTTGCTAGGATTTTGTGTGAGCAGGCGTACAGAATGGCTCAAAACTTGGATCCTAACAGCGACGGTAGAGGTGTTCTTCAGTTTAAGACCGGATTAATGTCTGTTATTAAGCAAAAACTTGTAAAGAAGGATGGGGCATCTATAGATCGTCATCGTGATATTGAACATCTGTGGGAGTTCTACAAGCAATATAAGAGACGGCATAGAATAGATGATATACAAAGAGAAGAACAAAAATGGCGGGAGTCGGGAGTAATCAGTGCTAACTTGGGAGAGTTGGAGCTTAGATATTCTGAAGCGAAGAAAGTAATTGCTAACCTTAGGGCTTTAGTTGAGGTGATGGAGGCTCTCAGTGGAGATGCAGATCCTCAAGGAGTCGGAAGATTGATTATGGAGGAGCTACGAAGAGTTAGAAGTTCTGATAATACATTATCCGGGGAATTTGTACCCTACAATATTGTACCTTTGGACGCACAATCACTAACAAATGCCATTGGCATTTTTCCTGAAGTAAGGGCTACAATATCTGCAATCAGATATACAGAGCATTTCCCGAGACTGCCTTCGGAATTTCAGATATCTGGACAAAGGAGTGCAGATATGTTTGACCTTCTTGAATATGCATTTGGATTCCAGGAGGACAACATAAGAAATCAGCGAGAGCATGTGGTTCTCATGGTAGCAAATGCTCAATCTCGTCTTGGCATACCTAATAATGCTGATCCTAAATTAGATGAGAAAGCAGTCAACGAGGTCTTTTTGAAGGTGCTTGATAACTACATCAAATGGTGTAAATACTTACGTATTCGCCTTGCATGGAACAGCTTAGAGGCAATTAATAGGGACAGGAAGCTTTTCCTTGTTTCTCTGTACTTGCTTATATGGGGTGAAGCAGCAAATGTTCGCTTCCTTCCTGAATGTATTTGCTACTTGTTCCACCATATGGCAAAAGAACTGGATGCCATGCTTGATCATGATGAAGCAGTTCGTTCGGAAAACTGTAAGCTGGAAAATGGTTCTGTGTCTTTCCTCCAGCAAATCATTTGTCCTATCTACGAGACACTTGTAGCTGAAACTGAAAGAAACAAAAATGGGAAAGCTGCACATTCAGCATGGAGGAACTATGATGATTTCAATGAATACTTTTGGTCACCTACATGCTTTGAATTGGGCTGGCCAATGAGGAAGGAGTCAAGTTTTTTACAGAAGCCCAAAGGCTCGAAACGGACTGGAAAGACGTCTTTTGTTGAGCATCGCACATTTCTTCATTTGTATCGCAGTTTCCACCGTCTCTGGATCTTTTTGGCAATTGTATTTCAGGCTCTGACAATTTTTGCTTTCCACAAAGAGCGTCTTAATTTAGACACTTTCAAAGCTATTCTTAGCATTGGGCCAACATTTGCGATCATGAACTTCATTGAGAGTTCTTTAGATGTATTACTTACTTTTGGAGCATACACCACTGCAAGAGGAATGGCTATATCAAGGATTGTTATTAGATTCTTCTGGTGGGGATTGAGTTCAGTTTTTGTGACTTATGTTTATGTGAAGGTTCTTGAGGAAAGAAATACTCGAAGCTCAGATAATTCATTCTACTTCCGAATATATATTATAGTGTTGGGTGTTTATGCTGCTTTACGCCTTGTGGTTGCAATGCTGATGAAGTTACCTGCATGCCATACTCTTTCTGAGATGTCAGATCAGTCTTTTTTTCAGTTTTTCAAATGGATCTATCAGGAACGTTACTTTGTCGGTCGTGGTCTATATGAAAAACCAAGTGACTATTGCAGATATGTAGCCTTTTGGTTAGTGCTCTTGATCTGTAAATTTGTTTTTGCTTACTTTCTCCAGATTAAACCACTTGTCCAACCAACCACTATTATTGTCAACCTTCCATCTCTTGAATATTCGTGGCATTCTTTCATTTCAAAGAATAATAATAATGTGTCGACTGTAGTTAGCTTATGGGCTCCTGTTGTTGCTCTCTATCTCTTGGACATTTACATATGGTACACACTCTTGTCAGCCATCATTGGTGGTGTAAAGGGTGCTCGGGGTCGGTTGGGAGAGATACGATCGCTTGAAATGATGCACAAACGTTTTGAGAGCTTTCCAGAAGCATTTGTGAAGAACCTTGTCTCTAGACAGACGAAAAGTTTGCCACCCAACGGACAAGCACCTCAGGACGCTCCGGATATGAGCAAGACATATGCAGCAATTTTTTCTCCATTTTGGAATGAGATCATTAAAAGTTTACGTGAGGAAGACTTCATTAGCAATAGGGAGATGGACTTGCTTTCGATCCCCAGCAACACAGGGAGCCTTAGATTGGTCCAGTGGCCTCTTTTTCTTTTAAGTAGTAAGATATTCTTGGCTGTTGATTTGGCTTTGGACTGCAAAGATACGCAGGCAGATCTATGGAACAGAATATGTCGGGATGAGTATATGGCATATGCAGTTCAAGAATGTTACTACAGTGTTGAAAAAATCTTATATGCCCTTGTTGATGGTGAAGGCAGACTTTGGGTTGAAAGGATATTCCGGGAGATTACCAATAGTATTTCAGAGGGTTCACTGGTTATAACATTGAACCTTAAGAAGATTCCAATTGTGTTACAAAAGTTTACAGCGCTTACAGGGCTTTTGACTCGAAATGAAACTCCTCAACTTGCTAGAGGTGCTGCAAAAGCTGTGTTTGAGCTTTATGAGGTTGTTACCCATGACCTGCTTTCATCGGATTTGAGGGAGCAGCTTGATACATGGAATATCTTGTTGAGGGCAAGAAATGAAGGTCGCCTTTTTTCTCGGATTGAATGGCCCAAAGATCTAGAAATTAAAGAGCTTGTGAAGCGTCTGCATTTGCTTCTTACAGTGAAGGACTCAGCAGCTAACATCCCAAAAAATCTCGAAGCAAGGAGAAGACTGCAGTTTTTTACAAATTCATTATTTATGGACATGCCTTCAGCAAAACCTGTCAGTGAAATGGTGCCATTCAGCGTCTTTACTCCATACTACAGTGAAACTGTGCTTTATAGTTCCTCGGAAATACGAATGGAAAATGAGGATGGCATATCCATTCTTTTCTATCTTCAGAAAATTTTTCCAGATGAATGGGAGAATTTCTTGGAACGGATAGGTCGAAGTCATGCCACTGGGGAAGCAGAGCTCCAAAAAAGTCCAAGTGATGCATTGGAGCTTCGGTTTTGGGTTTCTTATAGAGGGCAGACTCTGGCTCGGACAGTTCGTGGAATGATGTACTACAGAAGAGCATTAATGCTTCAGAGCTATCTGGAGAAAAGATCATTTGGGGATGATTATTCTCAAACGAACTTTTCCACAAGTCAGGGCTTTGAGTTATCTCGTGAATCAAGGGCACAAGCAGACTTGAAATTTACTTATGTCGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGCTCCAGAGGCTACTGATATTGCTCTTTTGCTGCAGAGGAATGAGGGACTTCGTGTTGCTTTCATTCACGTGGAAGATAGTGTTGCATCTGATGGCAAAGTTGTAAAGGAATTTTATTCGAAGCTTGTGAAAGCTGATATACATGGAAAAGATCAGGAAGTATATTCGATCAAACTTCCTGGTGAGCCAAAGCTAGGAGAAGGAAAACCTGAAAACCAAAACCATGCTATAGTATTCACTCGAGGAGATGCTGTTCAAACTATTGACATGAATCAGGACAACTATCTTGAAGAGGCAATGAAAATGAGAAATCTTCTAGAGGAATTTCATGCAAAGCATGGGCTTCGCCCACCTACCATCTTAGGCGTGAGAGAGCATGTATTCACTGGAAGTGTTTCTTCCTTAGCATGGTTCATGTCTAATCAGGAAACTAGCTTTGTAACCTTGGGACAACGTGTTTTGGCAAGTCCACTCAAAGTCCGAATGCATTATGGGCATCCTGATGTGTTTGATCGTATATTTCATATAACTCGAGGTGGCATTAGCAAGGCATCACGTGTGATCAACATCAGTGAGGATATATATGCAGGTTTCAACTCCACTTTGAGGCAGGGTAACATTACACACCACGAGTATATCCAGGTTGGAAAAGGAAGGGATGTTGGATTAAACCAAATAGCCCTGTTTGAAGGGAAAGTAGCTGGTGGGAATGGAGAGCAAGTTCTCAGCAGGGATGTTTACAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTATCATTTTATTTCACAACTGTTGGTTACTATGCATGTACAATGATGACAGTTCTTGTGGTTTACATTTTCTTGTATGGACGGGTTTACTTGGCCTTCGCTGGACTTGACGAAGCAATCTCAAGGAGGGCAAAAATGTTGGGAAACACAGCATTAGATACTGCACTGAATGCTCAGTTTTTGTTCCAGATTGGAGTTTTTACAGCAGTCCCTATGATAATGGGTTTTATACTTGAACTTGGACTGCTGAAGGCTGTTTTTAGCTTCATAACTATGCAGCTTCAGTTATGTTCTGTCTTCTTCACATTCTCATTGGGGACTCGAACTCATTATTTTGGAAGAACTATTCTCCATGGTGGTGCCAAGTATCGAGCAACTGGTAGAGGTTTTGTGGTCCAGCACATCAAATTTGCTGAAAATTATCGCCTCTACTCAAGAAGTCATTTCATCAAGGCGCTCGAGGTGGCATTGCTTCTTATTATCTACATTGCGTATGGGTATTCAGAAGGAGGTGCAAGTACTTTTGTTTTACTTACTCTCAGCAGTTGGTTCCTCGTAATTTCGTGGCTCTTTGCTCCTTACATCTTCAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAGGATTTTGACGATTGGACTAGCTGGCTATTCTACAAAGGGGGAGTAGGGGTTAAGGGAGAAAACAGTTGGGAGTCATGGTGGGATGAGGAACAGGCACATATTCAAACTTTCAGAGGTCGAATACTGGAGACAATTTTGACCGTGAGGTTCTTCATATTTCAATTTGGAATTGTGTACAAGCTCCATCTCACAGGAAAGGACACATCACTTGCGCTCTATGGTTTTTCGTGGGTGGTGCTCGTTGGGATTGTTTTGATATTCAAGATTTTCACCTTCAGCCCTAAAAAATCGACGAACTTCCAGCTATTGATGAGATTCATTCAGGGTGTCACAGCCATTGTTCTGGTTACAGCTCTTGGTCTAATTGTTGGCTTCACTAACCTATCAATAACCGATTTATTTGCAAGTCTTCTAGCATTTATTCCTACTGGATGGGCCATATTATGTCTTGCAGTTACTTGGAAGAAAGTGGTGAGAAGTCTAGGTTTGTGGGACTCGGTACGTGAATTTGCCAGGATGTATGATGCAGGGATGGGATTAATAATATTTGTGCCGATCGCATTCTTATCCTGGTTTCCTTTCATTTCCACGTTCCAATCTCGTCTGCTCTTCAATCAAGCTTTCAGCCGTGGGCTCGAGATCTCCCTCATCCTTGCTGGAAACAAAGCTAACATCGAGACATAG 5718 41.69 MARVNDNWERLVRATLKREQLRNAGQGHGRTPSGIVGAVPPSLGKTTNIDAILQAADEIQAEDSTVARILCEQAYRMAQNLDPNSDGRGVLQFKTGLMSVIKQKLVKKDGASIDRHRDIEHLWEFYKQYKRRHRIDDIQREEQKWRESGVISANLGELELRYSEAKKVIANLRALVEVMEALSGDADPQGVGRLIMEELRRVRSSDNTLSGEFVPYNIVPLDAQSLTNAIGIFPEVRATISAIRYTEHFPRLPSEFQISGQRSADMFDLLEYAFGFQEDNIRNQREHVVLMVANAQSRLGIPNNADPKLDEKAVNEVFLKVLDNYIKWCKYLRIRLAWNSLEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDAMLDHDEAVRSENCKLENGSVSFLQQIICPIYETLVAETERNKNGKAAHSAWRNYDDFNEYFWSPTCFELGWPMRKESSFLQKPKGSKRTGKTSFVEHRTFLHLYRSFHRLWIFLAIVFQALTIFAFHKERLNLDTFKAILSIGPTFAIMNFIESSLDVLLTFGAYTTARGMAISRIVIRFFWWGLSSVFVTYVYVKVLEERNTRSSDNSFYFRIYIIVLGVYAALRLVVAMLMKLPACHTLSEMSDQSFFQFFKWIYQERYFVGRGLYEKPSDYCRYVAFWLVLLICKFVFAYFLQIKPLVQPTTIIVNLPSLEYSWHSFISKNNNNVSTVVSLWAPVVALYLLDIYIWYTLLSAIIGGVKGARGRLGEIRSLEMMHKRFESFPEAFVKNLVSRQTKSLPPNGQAPQDAPDMSKTYAAIFSPFWNEIIKSLREEDFISNREMDLLSIPSNTGSLRLVQWPLFLLSSKIFLAVDLALDCKDTQADLWNRICRDEYMAYAVQECYYSVEKILYALVDGEGRLWVERIFREITNSISEGSLVITLNLKKIPIVLQKFTALTGLLTRNETPQLARGAAKAVFELYEVVTHDLLSSDLREQLDTWNILLRARNEGRLFSRIEWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEARRRLQFFTNSLFMDMPSAKPVSEMVPFSVFTPYYSETVLYSSSEIRMENEDGISILFYLQKIFPDEWENFLERIGRSHATGEAELQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDDYSQTNFSTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKAPEATDIALLLQRNEGLRVAFIHVEDSVASDGKVVKEFYSKLVKADIHGKDQEVYSIKLPGEPKLGEGKPENQNHAIVFTRGDAVQTIDMNQDNYLEEAMKMRNLLEEFHAKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFAGLDEAISRRAKMLGNTALDTALNAQFLFQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFAENYRLYSRSHFIKALEVALLLIIYIAYGYSEGGASTFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGENSWESWWDEEQAHIQTFRGRILETILTVRFFIFQFGIVYKLHLTGKDTSLALYGFSWVVLVGIVLIFKIFTFSPKKSTNFQLLMRFIQGVTAIVLVTALGLIVGFTNLSITDLFASLLAFIPTGWAILCLAVTWKKVVRSLGLWDSVREFARMYDAGMGLIIFVPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANIET 1905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26529912 26563083 - MELO3C026219.2.1 Cme02g02052 321941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02052 1905 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1903 - -
Cme02g02052 1905 PANTHER BNAC03G35120D PROTEIN 1 1903 - -
Cme02g02052 1905 Pfam 1,3-beta-glucan synthase component 1030 1724 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cme02g02052 1905 Coils Coil 155 175 - -
Cme02g02052 1905 SMART FKS1_dom1_2 347 460 IPR026899 -
Cme02g02052 1905 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02052 Cme-Chr2:26529912 Cme11g00062 Cme-Chr11:519013 0 dispersed
Cme02g02052 Cme-Chr2:26529912 Cme02g00458 Cme-Chr2:4111570 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02052 K11000 - csv:101217890 3750.67