Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02059 ATGATCTACTTCACCATGTCCCTCTTCCTACTTCTCTCAACTTCTTTATGGGCTTTTTTTCTTCTCTATCTTTGCATATTCAAATTCTACTGCTTCTCTAGAAAGCGCTTTTACTATTCTCCATCTTCATATCCTTTCGTAGGTTGCTTGATTTCCTTTTACAAAAACCGGCGTAGGCTTCTGGCTTGGTACACCGATCTGCTGTCGGACTCACCGACTCGGACCATCGTGTTGCATCGGCTCGGTTCGAGGCGGACCATTTTGACGGCTAACCCAGCCAATGTAGAACACATGTTGAAGACTAATTTTCTTAATTATCCTAAAGGGAAGCCGTTTACTGATATACTCGGTGATCTACTTGGGTGTGGCATTTTTAACGTCGACGGGGATTTATGGTCCACACAAAGGAAGCTTGCAAGTCATGCTTTTTCCGCTAAGTCGTTAAGGGAATTCGTGGTTAAAACGCTTGAAGATGAAGTTCATTTCCGTTTGATTCCTTTGCTCCATAACGCTGCGAGAACTAACGCTGTTGTTGATTTGCAAGATGTTTTAGGAAGACTCGCTTTTGACACGGTTTGTAAGGTAACGTTAGGAACAGACGAGCAATGTTTGGACATGTCACGCCCAATCCCAGAAATTGTAAATGCATTCGACGTGGCAACGGCGATCAGCGCAAGGCGGGCAGTGGCGCCACTCTACCTCACGTGGAAGGCCAAGCGCATGCTCAACCTCGGCTCTGAAAAGAAGCTAAAAGAAGTGGTTCAAACGGTTCACGAATGGATCTCCAATATCATTCACAGCAAACTCCTCAATAACAACAACAATAATACAGTTCATAACCATAACCAAACACACAACAACGATCTTTTATCTCGTCTCTTATCGGCCGGCCTCGACGAGGAAGTCGTCAGAGACATGATCGTAAGCTTCATAATGGCTGGCCGCGACACCACCTCAGCTGCCATGACATGGCTCTTTTGGTTGCTCACAAACCACCGGAACATCGAACAAACCATAATCAACGAAGCCACTTCATTGTCGGACGATTCGAAAACCACATCGTTAGGTTATGGTTACGAAGAATTGAAAGATATGAAGTATTTGAAAGCGTGTTTATGCGAGTCAATGAGACTATACCCACCAGTAGCTTGGGATTCAAAGCATGCAGCAGCCGCGGACATTCTCCCGGACGGAACCCAAGTGAGAAAAGGGGATAGAGTGACGTATTTTCCTTACGGAATGGGGCGGATGGAGGAGCTATGGGGAAAAGACCGACTAGAGTTCAAACCGGAGAGGTGGTTCCAAAACGGGGAGTTGAAAACGGTGAGTCCGTTCAAGTTTCCGGTGTTTCAAGCGGGTCCAAGGATGTGTTTGGGAATGGAAATGGCGTTCATTCAGATGAAATACGTAATGGCCACGGTTTTGAAACGGTTTGAATTTAGACCGGTGAGTGAAAATAATGTGCCGGTCTTTGTCCCGTTGCTGACAGCGCATATGGCGGGTGGACTTCAGGTCTTTGTCAGGGAAAGGACGGAACAATAG 1542 46.17 MIYFTMSLFLLLSTSLWAFFLLYLCIFKFYCFSRKRFYYSPSSYPFVGCLISFYKNRRRLLAWYTDLLSDSPTRTIVLHRLGSRRTILTANPANVEHMLKTNFLNYPKGKPFTDILGDLLGCGIFNVDGDLWSTQRKLASHAFSAKSLREFVVKTLEDEVHFRLIPLLHNAARTNAVVDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPIPEIVNAFDVATAISARRAVAPLYLTWKAKRMLNLGSEKKLKEVVQTVHEWISNIIHSKLLNNNNNNTVHNHNQTHNNDLLSRLLSAGLDEEVVRDMIVSFIMAGRDTTSAAMTWLFWLLTNHRNIEQTIINEATSLSDDSKTTSLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTQVRKGDRVTYFPYGMGRMEELWGKDRLEFKPERWFQNGELKTVSPFKFPVFQAGPRMCLGMEMAFIQMKYVMATVLKRFEFRPVSENNVPVFVPLLTAHMAGGLQVFVRERTEQ 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26588824 26591458 - MELO3C026212.2.1 Cme02g02059 321948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02059 513 Gene3D Cytochrome P450 22 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PANTHER CYTOCHROME P450 21 508 - -
Cme02g02059 513 SUPERFAMILY Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PANTHER CYTOCHROME P450 94B3 21 508 - -
Cme02g02059 513 Pfam Cytochrome P450 41 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS E-class P450 group IV signature 304 330 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS E-class P450 group IV signature 365 381 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS E-class P450 group IV signature 399 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS E-class P450 group IV signature 416 434 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g02059 513 PRINTS E-class P450 group IV signature 457 475 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02059 Cme-Chr2:26588824 Cme06g01814 Cme-Chr6:21203204 0 dispersed
Cme04g02127 Cme-Chr4:28604256 Cme02g02059 Cme-Chr2:26588824 3.90E-38 dispersed
Cme04g02128 Cme-Chr4:28605370 Cme02g02059 Cme-Chr2:26588824 8.38E-69 dispersed
Cme02g02059 Cme-Chr2:26588824 Cme01g02420 Cme-Chr1:32482869 5.44E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02059 K20665 - csv:101202989 956.822