Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02068 GGTGGAAGCCGAGAAACGAATCGTGAAGGCCTCTGTTACCTTATCTCAACTCTTTTCGGAGTTCTTTGTGTTTCTTTTCTTCTTTTTCTTCCTTCCTTCCATTTTCATCACTTCAAATATTTCTTCACATTCCCCAAATCTCCTCATTCTTCTTCCATTTGGGTCAACCGCCGCCGTCCCCGGCCGATGGACACCAACAATCAAGCTCAATCCTCTCCCTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTCCACCACCTCCTTCAGCAGCAACAACAACAGCTTCAGATGTTCTGGTCCTTCCAACGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTCTTGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTTCGTATGATCTCTGCCGAGGCCCCCATTTTGTTCGCTAAGGCTTGTGAGCTTTTTATTCTTGAACTCACTATTAGGTCATGGCTCCACGCCGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCTGCTGCTATCACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTTCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGAGGTATGGTTGGAGCCACTGCTAGTGGAGTTCCGTACTATTATCCGCCTATGGGTCAACCGGCGGGGGCTCCCGGGGGAATGATGATTGGGAGACCGGCAATGGATCCCACTGGAGTTTACGCTCAGCCGCCGTCCCAGGCCTGGCAATCCGTGTGGCAGACCGCTGCTGAGGATGGTTCTTACGCGAGTGGGGCCAGCAGCGGGCAGGGTAATCTTGATGGTCAGAGGTAG 849 51.12 GGSRETNREGLCYLISTLFGVLCVSFLLFLPSFHFHHFKYFFTFPKSPHSSSIWVNRRRPRPMDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQR 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26656121 26656974 - MELO3C026204.2.1 Cme02g02068 321957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02068 282 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 64 281 - -
Cme02g02068 282 Pfam Core histone H2A/H2B/H3/H4 110 181 IPR007125 GO:0003677
Cme02g02068 282 SUPERFAMILY Histone-fold 70 190 IPR009072 GO:0046982
Cme02g02068 282 MobiDBLite consensus disorder prediction 56 78 - -
Cme02g02068 282 Gene3D Histone, subunit A 86 196 IPR009072 GO:0046982
Cme02g02068 282 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 64 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00106 Cme-Chr2:787039 Cme02g02068 Cme-Chr2:26656121 4.30E-69 dispersed
Cme02g02068 Cme-Chr2:26656121 Cme07g01623 Cme-Chr7:22011662 2.04E-29 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40959 PF00808 CBFD_NFYB_HMF 3.40E-17 CL0012 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02068 - - csv:101213576 360.147