Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02103 ATGGGTGTGTCAAAAGATAGGCAACGACAATCTCTGGTGCAGGTGCCAAGCTTTGTGTATTCTCAAACACAAACAGCGGTTAGGAGCTTCCCAATTGAAGCTCCGAAAGAGAAGATAAAGATGTATTCACCAGCCTTCTATGCAGCATGCACAGCCGGAGGCATTTTGAGCTGTGGACTCACCCACATGGCTGTCACCCCCCTCGATCTCGTCAAGTGCAATATGCAGATCGATCCAGCAAAGTACAAGAATATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAAAGGGTTCTTCCGGGGATGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTTTACGAATTCTTCAAGAAGTACTATTCTGATAAGGTTGGAGCAGAGAATGCAGTCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTGATTGCGGATATTGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGTGTCCAAACTCAACCTGGTTTTGCTCGGGGTTTGTCAGATGGGCTTCCAAAGTTTGTCAAGTCTGAGGGCCCTCTTGGGCTCTACAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCATATACTATGATGAAATTTGCTTCTTTCGAAACAATTGTTGAGATGCTATACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAACTTGGAGTGAGCTTTGCCGGGGGGTATGTGGCCGGCGTCCTTTGTGCGGTGGTCTCACACCCAGCTGACAATCTTGTCTCTTTTCTAAACAACGCAAAGGGTGCAACTGCCGGGGATGCTGTCAGGCAGCTAGGTTTATGGGGTCTTTTCACTCGTGGCCTTCCACTTCGGATTGTTATGATTGGAACTCTTACCGGGTCTCAATGGGGAATATATGACGCATTCAAAGTTTTCGTTGGACTGCCAACAACAGGTGGGGCTACACCTGCTCCTGCAGCTAGCAAGTAA 1020 48.24 MGVSKDRQRQSLVQVPSFVYSQTQTAVRSFPIEAPKEKIKMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDKVGAENAVKYKTFIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGPLGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGATPAPAASK 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26819506 26821142 - MELO3C026171.2.1 Cme02g02103 321992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02103 339 Pfam Mitochondrial carrier protein 144 230 IPR018108 -
Cme02g02103 339 Pfam Mitochondrial carrier protein 48 132 IPR018108 -
Cme02g02103 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 129 IPR018108 -
Cme02g02103 339 Gene3D Mitochondrial carrier domain 45 323 IPR023395 -
Cme02g02103 339 SUPERFAMILY Mitochondrial carrier 48 318 IPR023395 -
Cme02g02103 339 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 19 338 IPR044677 GO:0005315|GO:1990547
Cme02g02103 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 142 226 IPR018108 -
Cme02g02103 339 PANTHER PHOSPHATE TRANSPORTER 19 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02103 Cme-Chr2:26819506 Cme09g01145 Cme-Chr9:16129838 0 dispersed
Cme02g02103 Cme-Chr2:26819506 Cme08g02449 Cme-Chr8:31357978 2.01E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02103 K15102 - csv:101220423 624.78